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Search of human proteins with 11321575
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11321575 lymphocyte antigen 6 complex, locus D [Homo
sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 257 2e-69
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 60 6e-10
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 60 6e-10
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 60 6e-10
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 57 4e-09
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 57 4e-09
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 57 4e-09
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 56 9e-09
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 48 2e-06
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 47 5e-06
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 47 5e-06
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 47 5e-06
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 44 4e-05
gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens] 42 2e-04
gi|4504033 glycosylphosphatidylinositol anchored molecule like p... 40 4e-04
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 39 0.001
gi|161333839 activin A receptor, type IC isoform 4 [Homo sapiens] 39 0.001
gi|161333837 activin A receptor, type IC isoform 3 [Homo sapiens] 39 0.001
gi|9966907 ARS component B precursor [Homo sapiens] 38 0.002
gi|4759226 transforming growth factor, beta receptor I isoform 1... 37 0.003
gi|195963412 transforming growth factor, beta receptor I isoform... 37 0.003
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 35 0.012
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 35 0.021
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 35 0.021
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens] 35 0.021
gi|187829185 CD59 antigen preproprotein [Homo sapiens] 32 0.14
gi|187829183 CD59 antigen preproprotein [Homo sapiens] 32 0.14
gi|10835165 CD59 antigen preproprotein [Homo sapiens] 32 0.14
gi|42716299 CD59 antigen preproprotein [Homo sapiens] 32 0.14
gi|187829070 CD59 antigen preproprotein [Homo sapiens] 32 0.14
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 257 bits (657), Expect = 2e-69
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK
Sbjct: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
Query: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSLL 120
KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSLL
Sbjct: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSLL 120
Query: 121 AVILAPSL 128
AVILAPSL
Sbjct: 121 AVILAPSL 128
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 59.7 bits (143), Expect = 6e-10
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
MR L+LL AV A L CHVC +C+ V C + ++C T P G LV
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSP-GGILVM 59
Query: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
K C+ +C P+ T+ S S CCQ CN
Sbjct: 60 KSCSPTC-PNSTVSS--DSRALSVSCCQGSQCN 89
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 59.7 bits (143), Expect = 6e-10
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
MR L+LL AV A L CHVC +C+ V C + ++C T P G LV
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSP-GGILVM 59
Query: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
K C+ +C P+ T+ S S CCQ CN
Sbjct: 60 KSCSPTC-PNSTVSS--DSRALSVSCCQGSQCN 89
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 59.7 bits (143), Expect = 6e-10
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
MR L+LL AV A L CHVC +C+ V C + ++C T P G LV
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSP-GGILVM 59
Query: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
K C+ +C P+ T+ S S CCQ CN
Sbjct: 60 KSCSPTC-PNSTVSS--DSRALSVSCCQGSQCN 89
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 57.0 bits (136), Expect = 4e-09
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
M L L+ + + A L CHVC + NC + + CPA +C TT T V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 60 KKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSL 119
K C C T+ S S+T CCQ DLCN T LA A +L LA L
Sbjct: 61 SKSCVPRCFE--TVYDGYSKHASTTSCCQYDLCN---------GTGLATPA-TLALAPIL 108
Query: 120 LAVI 123
LA +
Sbjct: 109 LATL 112
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 57.0 bits (136), Expect = 4e-09
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
M L L+ + + A L CHVC + NC + + CPA +C TT T V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 60 KKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSL 119
K C C T+ S S+T CCQ DLCN T LA A +L LA L
Sbjct: 61 SKSCVPRCFE--TVYDGYSKHASTTSCCQYDLCN---------GTGLATPA-TLALAPIL 108
Query: 120 LAVI 123
LA +
Sbjct: 109 LATL 112
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 57.0 bits (136), Expect = 4e-09
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
M L L+ + + A L CHVC + NC + + CPA +C TT T V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 60 KKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLALSL 119
K C C T+ S S+T CCQ DLCN T LA A +L LA L
Sbjct: 61 SKSCVPRCFE--TVYDGYSKHASTTSCCQYDLCN---------GTGLATPA-TLALAPIL 108
Query: 120 LAVI 123
LA +
Sbjct: 109 LATL 112
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 55.8 bits (133), Expect = 9e-09
Identities = 47/126 (37%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 3 TALLLLAALAVATGP-ALTLRCHVC---TSSSNCKHSVVCPASSRFCKTT----NTVEPL 54
T L LLA + A G A LRC+VC T S+C C + CKTT V P
Sbjct: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
Query: 55 RG-NLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSL 113
+G + V K CA C PS + G T CC +LCN + AP +L AL+L
Sbjct: 64 QGDSTVTKSCASKCKPS-DVDG--IGQTLPVSCCNTELCNV---DGAPALNSLHCGALTL 117
Query: 114 GLALSL 119
LSL
Sbjct: 118 LPLLSL 123
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 47.8 bits (112), Expect = 2e-06
Identities = 37/98 (37%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNT-----VEPLRGN 57
T LLL A L++ A + CH CT C H C S C TT T E L
Sbjct: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDL--P 62
Query: 58 LVKKDCAESC--TPSYTLQGQVSSGTSSTQCCQEDLCN 93
LV K C C PS L V S CCQ LCN
Sbjct: 63 LVTKMCHIGCPDIPSLGLGPYV-----SIACCQTSLCN 95
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 46.6 bits (109), Expect = 5e-06
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 6 LLLAALAVATGPALTLRCHVCTSSSNCKHSV--VCPASSRFCKTTNTVEP---LRGNLVK 60
L L A+ + + PA L C CT ++N H C S C + +P + + V
Sbjct: 32 LALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVN 91
Query: 61 KDCAESCT------PSYTLQGQVSSG--TSSTQCCQEDLCNEKLHNAAPTRTALAHS-AL 111
K CA SC S L G ++SG CC++DLCN A + ALA L
Sbjct: 92 KMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAA-GAGHSPWALAGGLLL 150
Query: 112 SLGLAL 117
SLG AL
Sbjct: 151 SLGPAL 156
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 46.6 bits (109), Expect = 5e-06
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 6 LLLAALAVATGPALTLRCHVCTSSSNCKHSV--VCPASSRFCKTTNTVEP---LRGNLVK 60
L L A+ + + PA L C CT ++N H C S C + +P + + V
Sbjct: 11 LALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVN 70
Query: 61 KDCAESCT------PSYTLQGQVSSG--TSSTQCCQEDLCNEKLHNAAPTRTALAHS-AL 111
K CA SC S L G ++SG CC++DLCN A + ALA L
Sbjct: 71 KMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAA-GAGHSPWALAGGLLL 129
Query: 112 SLGLAL 117
SLG AL
Sbjct: 130 SLGPAL 135
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 46.6 bits (109), Expect = 5e-06
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 6 LLLAALAVATGPALTLRCHVCTSSSNCKHSV--VCPASSRFCKTTNTVEP---LRGNLVK 60
L L A+ + + PA L C CT ++N H C S C + +P + + V
Sbjct: 32 LALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVN 91
Query: 61 KDCAESCT------PSYTLQGQVSSG--TSSTQCCQEDLCNEKLHNAAPTRTALAHS-AL 111
K CA SC S L G ++SG CC++DLCN A + ALA L
Sbjct: 92 KMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAA-GAGHSPWALAGGLLL 150
Query: 112 SLGLAL 117
SLG AL
Sbjct: 151 SLGPAL 156
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 43.5 bits (101), Expect = 4e-05
Identities = 34/100 (34%), Positives = 38/100 (38%), Gaps = 14/100 (14%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNT-----VEPLR 55
MR ++ + T A + CH CT C H C S C TT T E L
Sbjct: 37 MRCPAMVAYCMTTRTSAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDL- 95
Query: 56 GNLVKKDCAESC--TPSYTLQGQVSSGTSSTQCCQEDLCN 93
LV K C C PS L V S CCQ LCN
Sbjct: 96 -PLVTKMCHIGCPDIPSLGLGPYV-----SIACCQTSLCN 129
Score = 35.4 bits (80), Expect = 0.012
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCT-SSSNCKHSVVCPASSRFCKTTNT 50
M L L+ + + A L CHVC + NC + + CPA +C TT T
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRT 51
>gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens]
Length = 493
Score = 41.6 bits (96), Expect = 2e-04
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 21/136 (15%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSS-NCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
+R ALLLLAA A P L C +C SS+ C+ C AS TN
Sbjct: 9 LRQALLLLAA-AAELSPGLKCVCLLCDSSNFTCQTEGACWASVML---TNG--------- 55
Query: 60 KKDCAESCTPSYTLQGQV----SSGTSSTQCCQEDLCNE---KLHNAAPTRTALAHSALS 112
K+ +SC L QV S+ + T+CC D CN L A+P L L+
Sbjct: 56 KEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELA 115
Query: 113 LGLALSLLAVILAPSL 128
+ + + + + +A L
Sbjct: 116 IIITVPVCLLSIAAML 131
>gi|4504033 glycosylphosphatidylinositol anchored molecule like
protein [Homo sapiens]
Length = 158
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 6 LLLAALAVATGPALTLRCHVCT--SSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC 63
L+ A+ + +LRCH C + NC + VCP R C T + R LV K+C
Sbjct: 14 LVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISIRINSRELLVYKNC 73
Query: 64 AESCTPSYTLQ------GQVSSGTSS--TQCCQEDLCN 93
+CT Y + G++ S CC +CN
Sbjct: 74 TNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCN 111
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVC---TSSSNCKHSVVCPASSRFCKTTNTVEPLRGN 57
M+ LL L +A P L C+ C S+ +C C C T
Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
Query: 58 LVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLAL 117
++ K C+ +C G + CC DLCN +A A+ +LGL L
Sbjct: 61 VISKGCSLNCVDD---SQDYYVGKKNITCCDTDLCNASGAHALQPAAAILALLPALGLLL 117
>gi|161333839 activin A receptor, type IC isoform 4 [Homo sapiens]
Length = 336
Score = 38.9 bits (89), Expect = 0.001
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSS-NCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
+R ALLLLAA A P L C +C SS+ C+ C AS TN
Sbjct: 9 LRQALLLLAA-AAELSPGLKCVCLLCDSSNFTCQTEGACWASVML---TNG--------- 55
Query: 60 KKDCAESCTPSYTLQGQV----SSGTSSTQCCQEDLCN 93
K+ +SC L QV S+ + T+CC D CN
Sbjct: 56 KEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCN 93
>gi|161333837 activin A receptor, type IC isoform 3 [Homo sapiens]
Length = 413
Score = 38.9 bits (89), Expect = 0.001
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 1 MRTALLLLAALAVATGPALTLRCHVCTSSS-NCKHSVVCPASSRFCKTTNTVEPLRGNLV 59
+R ALLLLAA A P L C +C SS+ C+ C AS TN
Sbjct: 9 LRQALLLLAA-AAELSPGLKCVCLLCDSSNFTCQTEGACWASVML---TNG--------- 55
Query: 60 KKDCAESCTPSYTLQGQV----SSGTSSTQCCQEDLCN 93
K+ +SC L QV S+ + T+CC D CN
Sbjct: 56 KEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCN 93
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 5 LLLLAALAVATGPALTLRCHVCT---SSSNCKHSVVCPASSRFCKTTN-TVEPL----RG 56
LLL+AA ++ G AL +C+ C +S++C+ C C TT TVE +
Sbjct: 9 LLLVAAWSMGCGEAL--KCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQS 66
Query: 57 NLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKL 96
+V + C+ SC + CC DLCN +L
Sbjct: 67 PVVTRSCSSSCVAT---DPDSIGAAHLIFCCFRDLCNSEL 103
>gi|4759226 transforming growth factor, beta receptor I isoform 1
precursor [Homo sapiens]
Length = 503
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 25/108 (23%)
Query: 2 RTALLLLAALAVATGP------ALTLRCHVCTSSS-NCKHSVVCPASSRFCKTTNTVEPL 54
R LL+LAA A A AL CH+CT + C +C F T T + +
Sbjct: 11 RLLLLVLAAAAAAAAALLPGATALQCFCHLCTKDNFTCVTDGLC-----FVSVTETTDKV 65
Query: 55 RGN--------LVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNE 94
N L+ +D C PS + ++T CC +D CN+
Sbjct: 66 IHNSMCIAEIDLIPRDRPFVCAPS-----SKTGSVTTTYCCNQDHCNK 108
>gi|195963412 transforming growth factor, beta receptor I isoform 2
precursor [Homo sapiens]
Length = 426
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 25/108 (23%)
Query: 2 RTALLLLAALAVATGP------ALTLRCHVCTSSS-NCKHSVVCPASSRFCKTTNTVEPL 54
R LL+LAA A A AL CH+CT + C +C F T T + +
Sbjct: 11 RLLLLVLAAAAAAAAALLPGATALQCFCHLCTKDNFTCVTDGLC-----FVSVTETTDKV 65
Query: 55 RGN--------LVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNE 94
N L+ +D C PS + ++T CC +D CN+
Sbjct: 66 IHNSMCIAEIDLIPRDRPFVCAPS-----SKTGSVTTTYCCNQDHCNK 108
>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
Length = 171
Score = 35.4 bits (80), Expect = 0.012
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 22 RCHVCTSSSN---CKH---SVVCPASSRFCKTTNTVEPLRGNL-VKKDCA--ESCTPSYT 72
+C C +++ C + CP +R+C T +T+E ++ V K C E C +
Sbjct: 48 KCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEECLSTGC 107
Query: 73 LQGQVSSGTSSTQCCQEDLCN 93
+ T CC+ ++CN
Sbjct: 108 RDSEHEGHKVCTSCCEGNICN 128
>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 34.7 bits (78), Expect = 0.021
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVV--CPASSRFC---------KTTNTV 51
T LL L G L C +CT++ + H + C + C K V
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 52 EPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
+G + +DC T G +S+ CCQ D CN
Sbjct: 69 HTYKGCIRSQDCYSGVIS--TTMGPKDHMVTSSFCCQSDGCN 108
>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 34.7 bits (78), Expect = 0.021
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVV--CPASSRFC---------KTTNTV 51
T LL L G L C +CT++ + H + C + C K V
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 52 EPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
+G + +DC T G +S+ CCQ D CN
Sbjct: 69 HTYKGCIRSQDCYSGVIS--TTMGPKDHMVTSSFCCQSDGCN 108
>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 34.7 bits (78), Expect = 0.021
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVV--CPASSRFC---------KTTNTV 51
T LL L G L C +CT++ + H + C + C K V
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 52 EPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
+G + +DC T G +S+ CCQ D CN
Sbjct: 69 HTYKGCIRSQDCYSGVIS--TTMGPKDHMVTSSFCCQSDGCN 108
>gi|187829185 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 32.0 bits (71), Expect = 0.14
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 7 LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63
LL LAV +L+C+ C + +++CK +V C + C T G V C
Sbjct: 12 LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
Query: 64 AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98
E C + + ++ + CC++DLC NE+L N
Sbjct: 67 FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
>gi|187829183 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 32.0 bits (71), Expect = 0.14
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 7 LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63
LL LAV +L+C+ C + +++CK +V C + C T G V C
Sbjct: 12 LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
Query: 64 AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98
E C + + ++ + CC++DLC NE+L N
Sbjct: 67 FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
>gi|10835165 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 32.0 bits (71), Expect = 0.14
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 7 LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63
LL LAV +L+C+ C + +++CK +V C + C T G V C
Sbjct: 12 LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
Query: 64 AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98
E C + + ++ + CC++DLC NE+L N
Sbjct: 67 FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
>gi|42716299 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 32.0 bits (71), Expect = 0.14
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 7 LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63
LL LAV +L+C+ C + +++CK +V C + C T G V C
Sbjct: 12 LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
Query: 64 AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98
E C + + ++ + CC++DLC NE+L N
Sbjct: 67 FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
>gi|187829070 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 32.0 bits (71), Expect = 0.14
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 7 LLAALAVATGPALTLRCHVCTS-SSNCKHSVVCPASSRFCKTTNTVEPLRGNLVKKDC-- 63
LL LAV +L+C+ C + +++CK +V C + C T G V C
Sbjct: 12 LLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA-----GLQVYNKCWK 66
Query: 64 AESCTPSYTLQGQVSSGTSSTQCCQEDLC--NEKLHN 98
E C + + ++ + CC++DLC NE+L N
Sbjct: 67 FEHCNFN-DVTTRLRENELTYYCCKKDLCNFNEQLEN 102
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.126 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,738,276
Number of Sequences: 37866
Number of extensions: 196790
Number of successful extensions: 770
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 663
Number of HSP's gapped (non-prelim): 152
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.