Guide to the Human Genome
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Name: ACVR1C Sequence: fasta or formatted (413aa) NCBI GI: 161333837
Description:

activin A receptor, type IC isoform 3

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [493aa] activin A receptor, type IC isoform 1
alt prot [443aa] activin A receptor, type IC isoform 2
alt prot [336aa] activin A receptor, type IC isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         33           4
 C cysteine            4.8         20           2
 D aspartate           4.4         18           2
 E glutamate           6.3         26           2
 F phenylalanine       2.7         11           1
 G glycine             5.6         23           2
 H histidine           2.2          9           1
 I isoleucine          7.0         29           1
 K lysine              5.6         23           2
 L leucine             9.7         40           4
 M methionine          2.9         12           1
 N asparagine          4.6         19           2
 P proline             3.1         13           1
 Q glutamine           3.9         16           1
 R arginine            5.6         23           2
 S serine              6.3         26           2
 T threonine           5.3         22           1
 V valine              7.3         30           2
 W tryptophan          2.2          9           1
 Y tyrosine            2.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IC isoform 3 
ACVR1C                0.747   activin A receptor, type IC isoform 2 
ACVR1C                0.747   activin A receptor, type IC isoform 1 
TGFBR1                0.686   transforming growth factor, beta receptor I isoform...
TGFBR1                0.623   transforming growth factor, beta receptor I isoform 1...
ACVR1B                0.618   activin A receptor, type IB isoform a precursor [Homo...
ACVR1C                0.556   activin A receptor, type IC isoform 4 
ACVR1B                0.535   activin A receptor, type IB isoform b precursor [Hom...
BMPR1B                0.483   bone morphogenetic protein receptor, type IB precurso...
ACVR1                 0.471   activin A receptor, type I precursor 
ACVR1                 0.471   activin A receptor, type I precursor 
BMPR1A                0.471   bone morphogenetic protein receptor, type IA precurs...
ACVR1B                0.442   activin A receptor, type IB isoform c precursor [Hom...
ACVRL1                0.438   activin A receptor type II-like 1 
ACVRL1                0.438   activin A receptor type II-like 1 
ACVR2A                0.248   activin A receptor, type IIA precursor 
TGFBR2                0.241   transforming growth factor, beta receptor II isoform...
TGFBR2                0.241   transforming growth factor, beta receptor II isoform...
ACVR2B                0.241   activin A receptor, type IIB precursor 
BMPR2                 0.197   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.163   anti-Mullerian hormone receptor, type II 
CSK                   0.078   c-src tyrosine kinase 
CSK                   0.078   c-src tyrosine kinase 
ZAK                   0.069   MLK-related kinase isoform 2 
ZAK                   0.069   MLK-related kinase isoform 1 
RAF1                  0.068   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
MAP3K7                0.067   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.067   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.067   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.067   mitogen-activated protein kinase kinase kinase 7 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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