Guide to the Human Genome
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Name: ACVR1C Sequence: fasta or formatted (336aa) NCBI GI: 161333839
Description:

activin A receptor, type IC isoform 4

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [493aa] activin A receptor, type IC isoform 1
alt prot [443aa] activin A receptor, type IC isoform 2
alt prot [413aa] activin A receptor, type IC isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         28           4
 C cysteine            5.7         19           2
 D aspartate           4.5         15           2
 E glutamate           5.7         19           2
 F phenylalanine       2.1          7           1
 G glycine             4.8         16           2
 H histidine           2.1          7           1
 I isoleucine          6.5         22           1
 K lysine              6.0         20           2
 L leucine            10.1         34           4
 M methionine          3.3         11           1
 N asparagine          5.1         17           2
 P proline             3.6         12           1
 Q glutamine           3.9         13           1
 R arginine            4.5         15           2
 S serine              6.8         23           2
 T threonine           5.7         19           1
 V valine              6.8         23           2
 W tryptophan          1.8          6           1
 Y tyrosine            3.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IC isoform 4 
ACVR1C                0.686   activin A receptor, type IC isoform 3 
ACVR1C                0.686   activin A receptor, type IC isoform 2 
ACVR1C                0.686   activin A receptor, type IC isoform 1 
TGFBR1                0.556   transforming growth factor, beta receptor I isoform 1...
TGFBR1                0.556   transforming growth factor, beta receptor I isoform...
ACVR1B                0.550   activin A receptor, type IB isoform a precursor [Homo...
ACVR1B                0.447   activin A receptor, type IB isoform b precursor [Hom...
BMPR1B                0.428   bone morphogenetic protein receptor, type IB precurso...
BMPR1A                0.413   bone morphogenetic protein receptor, type IA precurs...
ACVR1                 0.402   activin A receptor, type I precursor 
ACVR1                 0.402   activin A receptor, type I precursor 
ACVRL1                0.366   activin A receptor type II-like 1 
ACVRL1                0.366   activin A receptor type II-like 1 
ACVR1B                0.332   activin A receptor, type IB isoform c precursor [Hom...
TGFBR2                0.228   transforming growth factor, beta receptor II isoform...
TGFBR2                0.228   transforming growth factor, beta receptor II isoform...
ACVR2A                0.224   activin A receptor, type IIA precursor 
ACVR2B                0.210   activin A receptor, type IIB precursor 
BMPR2                 0.182   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.164   anti-Mullerian hormone receptor, type II 
RIPK1                 0.068   receptor (TNFRSF)-interacting serine-threonine kinas...
ZAK                   0.063   MLK-related kinase isoform 2 
ZAK                   0.063   MLK-related kinase isoform 1 
CSK                   0.060   c-src tyrosine kinase 
CSK                   0.060   c-src tyrosine kinase 
TESK2                 0.059   testis-specific protein kinase 2 
STK24                 0.056   serine/threonine kinase 24 isoform b 
STK24                 0.056   serine/threonine kinase 24 isoform a 
MOS                   0.053   v-mos Moloney murine sarcoma viral oncogene homolog [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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