Search of human proteins with 105554421

Search of human proteins with 105554421

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|105554421 mitsugumin 29 [Homo sapiens]
         (272 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|105554421 mitsugumin 29 [Homo sapiens]                             561   e-160
gi|194018518 synaptoporin isoform 1 [Homo sapiens]                    237   7e-63
gi|27764867 synaptophysin [Homo sapiens]                              228   6e-60
gi|21389481 synaptoporin isoform 2 [Homo sapiens]                     222   2e-58
gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]             198   4e-51
gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]              198   4e-51
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]                35   0.070
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]         32   0.45 
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]         32   0.45 
gi|207452735 epiplakin 1 [Homo sapiens]                                30   1.7  
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ...    30   2.9  
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ...    30   2.9  
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ...    29   3.8  
gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [H...    29   5.0  
gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [H...    29   5.0  
gi|225543525 solute carrier organic anion transporter family, me...    28   6.5  
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H...    28   6.5  
gi|63477962 opioid receptor, delta 1 [Homo sapiens]                    28   6.5  
gi|5032099 smoothened [Homo sapiens]                                   28   8.5  
gi|30794264 glycosylphosphatidylinositol anchored high density l...    28   8.5  
gi|149944554 somatostatin receptor 4 [Homo sapiens]                    28   8.5  
gi|156119605 general transcription factor IIIC 4 [Homo sapiens]        28   8.5  

>gi|105554421 mitsugumin 29 [Homo sapiens]
          Length = 272

 Score =  561 bits (1446), Expect = e-160
 Identities = 272/272 (100%), Positives = 272/272 (100%)

Query: 1   MSSTESAGRTADKSPRQQVDRLLVGLRWRRLEEPLGFIKVLQWLFAIFAFGSCGSYSGET 60
           MSSTESAGRTADKSPRQQVDRLLVGLRWRRLEEPLGFIKVLQWLFAIFAFGSCGSYSGET
Sbjct: 1   MSSTESAGRTADKSPRQQVDRLLVGLRWRRLEEPLGFIKVLQWLFAIFAFGSCGSYSGET 60

Query: 61  GAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFFVT 120
           GAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFFVT
Sbjct: 61  GAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFFVT 120

Query: 121 LGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKG 180
           LGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKG
Sbjct: 121 LGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKG 180

Query: 181 ATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWH 240
           ATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWH
Sbjct: 181 ATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWH 240

Query: 241 GQGQGQDQDQDQDQGQGPSQESAAEQGAVEKQ 272
           GQGQGQDQDQDQDQGQGPSQESAAEQGAVEKQ
Sbjct: 241 GQGQGQDQDQDQDQGQGPSQESAAEQGAVEKQ 272


>gi|194018518 synaptoporin isoform 1 [Homo sapiens]
          Length = 285

 Score =  237 bits (605), Expect = 7e-63
 Identities = 115/226 (50%), Positives = 150/226 (66%), Gaps = 1/226 (0%)

Query: 19  VDRLLVGLRWRRLEEPLGFIKVLQWLFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIV 78
           V +L     +R L+EPL F++ L+ LFAIFAF +CG YSG     V C N+ +   SI +
Sbjct: 4   VSQLASAGTFRVLKEPLAFLRALELLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDI 63

Query: 79  AFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLR 138
           AF YPFRLH++ +E+P C+ +   K + L+GD S+ AEFFVT+ +F+F Y++AA V+Y+ 
Sbjct: 64  AFAYPFRLHQVTFEVPTCEGKERQK-LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIF 122

Query: 139 FHNLYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEE 198
           F N Y EN R PL+DF VTV F+F WLV ++AW KGL+DVK AT P  +   MS C    
Sbjct: 123 FQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPS 182

Query: 199 AVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWHGQGQ 244
             C A  +P M   N SV+FGF+NF LWAGN WFVFKET WH  GQ
Sbjct: 183 NKCMAIHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQ 228


>gi|27764867 synaptophysin [Homo sapiens]
          Length = 313

 Score =  228 bits (580), Expect = 6e-60
 Identities = 118/268 (44%), Positives = 157/268 (58%), Gaps = 18/268 (6%)

Query: 19  VDRLLVGLRWRRLEEPLGFIKVLQWLFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIV 78
           V++L+ G ++R ++EPLGF+KVLQW+FAIFAF +CGSYSGE    V C N+ +   SI V
Sbjct: 10  VNQLVAGGQFRVVKEPLGFVKVLQWVFAIFAFATCGSYSGELQLSVDCANKTESDLSIEV 69

Query: 79  AFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLR 138
            F YPFRLH++ ++ P C     +  + L+GD+S+ AEFFVT+ +F+F Y+M AL  Y+ 
Sbjct: 70  EFEYPFRLHQVYFDAPTC--RGGTTKVFLVGDYSSSAEFFVTVAVFAFLYSMGALATYIF 127

Query: 139 FHNLYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEE 198
             N Y EN + P++DF  T  F F WLV+++AW KGL+DVK AT P ++   M VC    
Sbjct: 128 LQNKYRENNKGPMLDFLATAVFAFMWLVSSSAWAKGLSDVKMATDPENIIKEMPVCRQTG 187

Query: 199 AVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPW------------HGQGQGQ 246
             C     P     N SV+FGF+N  LW GN WFVFKET W              Q    
Sbjct: 188 NTCKELRDPVTSGLNTSVVFGFLNLVLWVGNLWFVFKETGWAAPFLRAPPGAPEKQPAPG 247

Query: 247 DQDQDQDQGQGPS----QESAAEQGAVE 270
           D   D   GQGP     Q+S   QG  +
Sbjct: 248 DAYGDAGYGQGPGGYGPQDSYGPQGGYQ 275


>gi|21389481 synaptoporin isoform 2 [Homo sapiens]
          Length = 265

 Score =  222 bits (566), Expect = 2e-58
 Identities = 106/201 (52%), Positives = 135/201 (67%), Gaps = 1/201 (0%)

Query: 44  LFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESSSK 103
           LFAIFAF +CG YSG     V C N+ +   SI +AF YPFRLH++ +E+P C+ +   K
Sbjct: 9   LFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQK 68

Query: 104 TMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFF 163
            + L+GD S+ AEFFVT+ +F+F Y++AA V+Y+ F N Y EN R PL+DF VTV F+F 
Sbjct: 69  -LALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFL 127

Query: 164 WLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINF 223
           WLV ++AW KGL+DVK AT P  +   MS C      C A  +P M   N SV+FGF+NF
Sbjct: 128 WLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNF 187

Query: 224 FLWAGNCWFVFKETPWHGQGQ 244
            LWAGN WFVFKET WH  GQ
Sbjct: 188 ILWAGNIWFVFKETGWHSSGQ 208


>gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]
          Length = 241

 Score =  198 bits (504), Expect = 4e-51
 Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 7/214 (3%)

Query: 31  LEEPLGFIKVLQWLFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQ 90
           L+EPLGFIKVL+W+ +IFAF +CG + G+T   V C     +  ++   FGYPFRL+   
Sbjct: 11  LKEPLGFIKVLEWIASIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEAS 70

Query: 91  YEMP----LCDEESSSKTMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTEN 146
           ++ P    +CD   + K   L+GD+S+ A+F+VT  +F F Y +AAL++Y+ + +LY ++
Sbjct: 71  FQPPPGVNICDV--NWKDYVLIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDS 128

Query: 147 KRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGAT 206
           ++ P++DF VT+  TF WLV+ +AW K LTD+K AT   ++   +  C  +  +C  G+ 
Sbjct: 129 RKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIAT-GHNIIDELPPCKKKAVLCYFGSV 187

Query: 207 PSMGLANISVLFGFINFFLWAGNCWFVFKETPWH 240
            SMG  N+SV+FGF+N  LW GN WFV+KET  H
Sbjct: 188 TSMGSLNVSVIFGFLNMILWGGNAWFVYKETSLH 221


>gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]
          Length = 259

 Score =  198 bits (504), Expect = 4e-51
 Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 7/214 (3%)

Query: 31  LEEPLGFIKVLQWLFAIFAFGSCGSYSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQ 90
           L+EPLGFIKVL+W+ +IFAF +CG + G+T   V C     +  ++   FGYPFRL+   
Sbjct: 29  LKEPLGFIKVLEWIASIFAFATCGGFKGQTEIQVNCPPAVTENKTVTATFGYPFRLNEAS 88

Query: 91  YEMP----LCDEESSSKTMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTEN 146
           ++ P    +CD   + K   L+GD+S+ A+F+VT  +F F Y +AAL++Y+ + +LY ++
Sbjct: 89  FQPPPGVNICDV--NWKDYVLIGDYSSSAQFYVTFAVFVFLYCIAALLLYVGYTSLYLDS 146

Query: 147 KRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGAT 206
           ++ P++DF VT+  TF WLV+ +AW K LTD+K AT   ++   +  C  +  +C  G+ 
Sbjct: 147 RKLPMIDFVVTLVATFLWLVSTSAWAKALTDIKIAT-GHNIIDELPPCKKKAVLCYFGSV 205

Query: 207 PSMGLANISVLFGFINFFLWAGNCWFVFKETPWH 240
            SMG  N+SV+FGF+N  LW GN WFV+KET  H
Sbjct: 206 TSMGSLNVSVIFGFLNMILWGGNAWFVYKETSLH 239


>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
          Length = 397

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 236 ETPWHGQGQGQDQDQDQDQGQGPSQESAAEQG 267
           +T   GQGQGQ Q Q Q QGQG  Q     QG
Sbjct: 174 QTQAEGQGQGQGQGQGQGQGQGQGQGQGQGQG 205



 Score = 33.5 bits (75), Expect = 0.20
 Identities = 16/29 (55%), Positives = 16/29 (55%)

Query: 241 GQGQGQDQDQDQDQGQGPSQESAAEQGAV 269
           GQGQGQ Q Q Q QGQG  Q      G V
Sbjct: 183 GQGQGQGQGQGQGQGQGQGQGQGRRPGLV 211



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 236 ETPWHGQGQGQDQDQDQDQGQGPSQESAAEQG 267
           E     +GQGQ Q Q Q QGQG  Q     QG
Sbjct: 172 EAQTQAEGQGQGQGQGQGQGQGQGQGQGQGQG 203



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/23 (60%), Positives = 15/23 (65%)

Query: 241 GQGQGQDQDQDQDQGQGPSQESA 263
           GQGQGQ Q Q Q QG+ P   SA
Sbjct: 191 GQGQGQGQGQGQGQGRRPGLVSA 213


>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
          Length = 2039

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 2   SSTESAGRTADKSPRQQVDRLLVGLRWRRLEEPL------GFIKVLQWLFAIFAFGSCGS 55
           S T  A +    S  +Q D+  V  R  R E PL      G +K ++ L ++ A  +   
Sbjct: 135 SQTTPAQKKTPSSSSRQKDK--VNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKD 192

Query: 56  YSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESS 101
           ++G T     CN    DV+ I++A G       +  + PL D  SS
Sbjct: 193 FAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASS 238


>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
          Length = 2062

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 2   SSTESAGRTADKSPRQQVDRLLVGLRWRRLEEPL------GFIKVLQWLFAIFAFGSCGS 55
           S T  A +    S  +Q D+  V  R  R E PL      G +K ++ L ++ A  +   
Sbjct: 158 SQTTPAQKKTPSSSSRQKDK--VNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKD 215

Query: 56  YSGETGAMVRCNNEAKDVSSIIVAFGYPFRLHRIQYEMPLCDEESS 101
           ++G T     CN    DV+ I++A G       +  + PL D  SS
Sbjct: 216 FAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASS 261


>gi|207452735 epiplakin 1 [Homo sapiens]
          Length = 5090

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 26/105 (24%)

Query: 169  AAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAG 228
            A +G G  D+   TR   LTA +     EEA  + GA P +  A             W G
Sbjct: 3089 AEFGSGTLDLPALTR--RLTAII-----EEAEEAPGARPQLQDA-------------WRG 3128

Query: 229  NCWFVFKETPWHGQGQGQD-QDQDQDQGQGPSQESAAEQGAVEKQ 272
                  +E    G+G G   + Q + QG+G +QE+AA   A  +Q
Sbjct: 3129 P-----REPGPAGRGDGDSGRSQREGQGEGETQEAAAAAAAARRQ 3168



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 26/105 (24%)

Query: 169  AAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAG 228
            A +G G  D+   TR   LTA +     EEA  + GA P +  A             W G
Sbjct: 3623 AEFGSGTLDLPALTR--RLTAII-----EEAEEAPGARPQLQDA-------------WRG 3662

Query: 229  NCWFVFKETPWHGQGQGQD-QDQDQDQGQGPSQESAAEQGAVEKQ 272
                  +E    G+G G   + Q + QG+G +QE+AA   A  +Q
Sbjct: 3663 P-----REPGPAGRGDGDSGRSQREGQGEGETQEAAAAAAAARRQ 3702



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 26/105 (24%)

Query: 169  AAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAG 228
            A +G G  D+   TR   LTA +     EEA  + GA P +  A             W G
Sbjct: 4157 AEFGSGTLDLPALTR--RLTAII-----EEAEEAPGARPQLQDA-------------WRG 4196

Query: 229  NCWFVFKETPWHGQGQGQD-QDQDQDQGQGPSQESAAEQGAVEKQ 272
                  +E    G+G G   + Q + QG+G +QE+AA   A  +Q
Sbjct: 4197 P-----REPGPAGRGDGDSGRSQREGQGEGETQEAAAATAAARRQ 4236



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 26/105 (24%)

Query: 169  AAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAG 228
            A +G G  D+   TR   LTA +     EEA  + GA P +  A             W G
Sbjct: 4691 AEFGSGTLDLPALTR--RLTAII-----EEAEEAPGARPQLQDA-------------WRG 4730

Query: 229  NCWFVFKETPWHGQGQGQD-QDQDQDQGQGPSQESAAEQGAVEKQ 272
                  +E    G+G G   + Q + QG+G +QE+AA   A  +Q
Sbjct: 4731 P-----REPGPAGRGDGDSGRSQREGQGEGETQEAAAAAAAARRQ 4770


>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
           sapiens]
          Length = 1642

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 114 PAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLV 166
           P    + + +  F Y ++++   L    L+ ++K   +V+F VTV+F F  L+
Sbjct: 292 PQSSSIVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFIGLM 344


>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
           sapiens]
          Length = 1642

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 114 PAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLV 166
           P    + + +  F Y ++++   L    L+ ++K   +V+F VTV+F F  L+
Sbjct: 292 PQSSSIVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFIGLM 344


>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
           sapiens]
          Length = 156

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query: 111 FSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKRFPLVDFCVTVSFTFFWLVAAAA 170
           F+A    ++   +  FF T+A L +Y   +    +   +P +DF   VS    +LV + A
Sbjct: 52  FTASISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFA 111


>gi|116295256 heparan sulfate 6-O-sulfotransferase 2 isoform L [Homo
           sapiens]
          Length = 645

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 236 ETPWHGQGQGQDQDQDQDQGQGPS 259
           +T +  QGQGQ Q+ +Q+Q Q P+
Sbjct: 567 QTHFQSQGQGQSQNPNQNQSQNPN 590


>gi|116295254 heparan sulfate 6-O-sulfotransferase 2 isoform S [Homo
           sapiens]
          Length = 605

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 236 ETPWHGQGQGQDQDQDQDQGQGPS 259
           +T +  QGQGQ Q+ +Q+Q Q P+
Sbjct: 527 QTHFQSQGQGQSQNPNQNQSQNPN 550


>gi|225543525 solute carrier organic anion transporter family,
           member 1B1 [Homo sapiens]
          Length = 691

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 22/91 (24%)

Query: 73  VSSIIVAFGYPFRLHRIQYEMPLCDEESSSKTMHLMGDFSAP---AEFFV---------- 119
           VSS I AF Y F+    QY  P      SSK   L+G  + P   +  F+          
Sbjct: 349 VSSYIGAFTYVFKYVEQQYGQP------SSKANILLGVITIPIFASGMFLGGYIIKKFKL 402

Query: 120 -TLGI--FSFFYTMAALVIYLRFHNLYTENK 147
            T+GI  FS F  + +L  YL +  +  ENK
Sbjct: 403 NTVGIAKFSCFTAVMSLSFYLLYFFILCENK 433


>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
           sapiens]
          Length = 1082

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 242 QGQGQDQDQDQDQGQGPSQESAAEQG 267
           +   +DQD+D+++G+G   E + E G
Sbjct: 717 ESDNEDQDEDEEKGRGSESEQSEEDG 742


>gi|63477962 opioid receptor, delta 1 [Homo sapiens]
          Length = 372

 Score = 28.5 bits (62), Expect = 6.5
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 167 AAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINF 223
           A  + G   +   GA   SSL  A+++     AVC+ G      L N+ V+FG + +
Sbjct: 26  ACPSAGANASGPPGARSASSLALAIAITALYSAVCAVGL-----LGNVLVMFGIVRY 77


>gi|5032099 smoothened [Homo sapiens]
          Length = 787

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 44/158 (27%), Positives = 59/158 (37%), Gaps = 38/158 (24%)

Query: 89  IQYEMPLCDEESSSKTMHLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHNLYTENKR 148
           IQ + PL  E +  + MH     S  A F    G+ + F T+A  V   R  N      R
Sbjct: 215 IQCQNPLFTE-AEHQDMH-----SYIAAFGAVTGLCTLF-TLATFVADWRNSN------R 261

Query: 149 FPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPS 208
           +P V     V+  FF  V +  W     D  GA R              E VC A  T  
Sbjct: 262 YPAV-ILFYVNACFF--VGSIGWLAQFMD--GARR--------------EIVCRADGTMR 302

Query: 209 MG------LANISVLFGFINFFLWAGNCWFVFKETPWH 240
           +G        +  ++F  + + L AG  WFV     WH
Sbjct: 303 LGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWH 340


>gi|30794264 glycosylphosphatidylinositol anchored high density
           lipoprotein binding protein 1 [Homo sapiens]
          Length = 184

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 241 GQGQGQDQDQDQDQGQGPSQESAAEQGAVEKQ 272
           G+GQ Q +++++D+  GP      ++  VE++
Sbjct: 18  GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49


>gi|149944554 somatostatin receptor 4 [Homo sapiens]
          Length = 388

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 180 GATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVF 234
           G   PS+  A+ +    EEAV   G   + G+  I  ++  +      GN   +F
Sbjct: 16  GTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLVGLVGNALVIF 70


>gi|156119605 general transcription factor IIIC 4 [Homo sapiens]
          Length = 822

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 60  TGAMVRCNNEAKDVSSIIVAFGYP-FRLHRIQYEMPLCDEESSSKTMHLMGDFSAPAEFF 118
           T   V+ NNE +DV S+++A  +    +   Q+++P   +ES S    +    ++P+  F
Sbjct: 258 TTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESISSCNTIESGITSPSVLF 317


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,309,901
Number of Sequences: 37866
Number of extensions: 436008
Number of successful extensions: 1243
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 35
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.