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Search of human proteins with 10257437
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10257437 tweety 1 isoform 1 [Homo sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10257437 tweety 1 isoform 1 [Homo sapiens] 897 0.0
gi|53831989 tweety 1 isoform 2 [Homo sapiens] 836 0.0
gi|53988385 tweety 2 isoform 1 [Homo sapiens] 362 e-100
gi|51100978 tweety 3 [Homo sapiens] 306 2e-83
gi|53988387 tweety 2 isoform 2 [Homo sapiens] 120 3e-27
gi|197313787 desmoglein 4 isoform 1 [Homo sapiens] 32 1.5
gi|29789445 desmoglein 4 isoform 2 [Homo sapiens] 32 1.5
gi|109255239 centrosomal protein 63 isoform b [Homo sapiens] 31 2.6
gi|22095367 centrosomal protein 63 isoform a [Homo sapiens] 31 2.6
gi|109255236 centrosomal protein 63 isoform d [Homo sapiens] 31 2.6
gi|109255226 centrosomal protein 63 isoform c [Homo sapiens] 31 2.6
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 31 2.6
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 31 2.6
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 31 2.6
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 31 2.6
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 31 2.6
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 31 2.6
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 31 2.6
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 31 2.6
gi|110347433 glycine receptor, alpha 3 isoform b [Homo sapiens] 31 2.6
gi|110347441 glycine receptor, alpha 3 isoform a [Homo sapiens] 31 2.6
gi|169646728 glycine receptor, alpha 2 isoform B [Homo sapiens] 30 5.8
gi|169646723 glycine receptor, alpha 2 isoform A [Homo sapiens] 30 5.8
gi|4504021 glycine receptor, alpha 2 isoform A [Homo sapiens] 30 5.8
gi|181337167 solute carrier family 7 (cationic amino acid transp... 30 5.8
gi|169161779 PREDICTED: similar to nucleophosmin 1 [Homo sapiens] 29 7.6
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 29 7.6
gi|169161624 PREDICTED: similar to nucleophosmin 1 [Homo sapiens] 29 7.6
gi|169162829 PREDICTED: similar to nucleophosmin 1 [Homo sapiens] 29 7.6
gi|52317134 olfactory receptor, family 5, subfamily M, member 3 ... 29 7.6
>gi|10257437 tweety 1 isoform 1 [Homo sapiens]
Length = 450
Score = 897 bits (2317), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI 60
MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI
Sbjct: 1 MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI 60
Query: 61 FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS 120
FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS
Sbjct: 61 FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS 120
Query: 121 QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE 180
QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE
Sbjct: 121 QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE 180
Query: 181 AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK 240
AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK
Sbjct: 181 AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK 240
Query: 241 WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY 300
WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY
Sbjct: 241 WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY 300
Query: 301 LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN 360
LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN
Sbjct: 301 LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN 360
Query: 361 FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF 420
FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF
Sbjct: 361 FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF 420
Query: 421 PPSDDYDDTDDDDPFNPQESKRFVQWQSSI 450
PPSDDYDDTDDDDPFNPQESKRFVQWQSSI
Sbjct: 421 PPSDDYDDTDDDDPFNPQESKRFVQWQSSI 450
>gi|53831989 tweety 1 isoform 2 [Homo sapiens]
Length = 460
Score = 836 bits (2160), Expect = 0.0
Identities = 422/422 (100%), Positives = 422/422 (100%)
Query: 1 MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI 60
MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI
Sbjct: 1 MGAPPGYRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLI 60
Query: 61 FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS 120
FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS
Sbjct: 61 FIAVYLIRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVS 120
Query: 121 QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE 180
QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE
Sbjct: 121 QLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAE 180
Query: 181 AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK 240
AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK
Sbjct: 181 AAAQQLQGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSK 240
Query: 241 WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY 300
WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY
Sbjct: 241 WLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY 300
Query: 301 LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN 360
LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN
Sbjct: 301 LLCNRAVSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGN 360
Query: 361 FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF 420
FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF
Sbjct: 361 FHQLVALLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALF 420
Query: 421 PP 422
PP
Sbjct: 421 PP 422
>gi|53988385 tweety 2 isoform 1 [Homo sapiens]
Length = 534
Score = 362 bits (929), Expect = e-100
Identities = 185/428 (43%), Positives = 272/428 (63%), Gaps = 5/428 (1%)
Query: 12 WVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLIFIAVYLIRFCC 71
WV LH +P +L+PV S F+P ++ YQ++LL + +A + LGL+LIF+ YL+ C
Sbjct: 13 WVVWLHSVPHVGLRLQPVNSTFSPGDESYQESLLFLGLVAAVCLGLNLIFLVAYLVCACH 72
Query: 72 CRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVSQLSSALLHANH 131
CR + +K C+TW+ +VA L C +G+GFYGNSET+DG QL +L ANH
Sbjct: 73 CRRDDAVQTK--QHHSCCITWTAVVAGLICCAAVGVGFYGNSETNDGAYQLMYSLDDANH 130
Query: 132 TLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAEAAAQQLQGLAF 191
T S ID LV T +++ + L L E+ R + + + ++ A + QL GL
Sbjct: 131 TFSGIDALVSGTTQKMKVDLEQHLARLSEIFAARGDYLQTLKFIQQMAGSVVVQLSGLPV 190
Query: 192 WQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSKWLVIVMTVMSL 251
W+ V + ++++ +VE YRWL+Y+LL +L+L++CL LGLAK+SK L+ M
Sbjct: 191 WREVTMELTKLSDQTGYVEYYRWLSYLLLFILDLVICLIACLGLAKRSKCLLASMLCCGA 250
Query: 252 LVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYYLLCNRAVSNPF 311
L L+LSW S+ + + AV SDFC PD ++LN+T+ + +S+++ YYL C+++ S+PF
Sbjct: 251 LSLLLSWASLAADGSAAVATSDFCVAPDTFILNVTEGQ--ISTEVTRYYLYCSQSGSSPF 308
Query: 312 QQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGNFHQLVALLHCR 371
QQ LT QRAL + Q+ GL + AVP F +A++ LL+++ LN +E + HQL A++ CR
Sbjct: 309 QQTLTTFQRALTTMQIQVAGLLQFAVPLFSTAEEDLLAIQLLLNSSESSLHQLTAMVDCR 368
Query: 372 SLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAWALFPPSD-DYDDTD 430
LHKDY AL G+C D L+GLL+L LFS L+A A +T +C+ PRAW F + DYDD D
Sbjct: 369 GLHKDYLDALAGICYDGLQGLLYLGLFSFLAALAFSTMICAGPRAWKHFTTRNRDYDDID 428
Query: 431 DDDPFNPQ 438
DDDPFNPQ
Sbjct: 429 DDDPFNPQ 436
>gi|51100978 tweety 3 [Homo sapiens]
Length = 523
Score = 306 bits (785), Expect = 2e-83
Identities = 163/411 (39%), Positives = 232/411 (56%), Gaps = 3/411 (0%)
Query: 7 YRPSAWVHLLHQLPRADFQLRPVPSVFAPQEQEYQQALLLVAALAGLGLGLSLIFIAVYL 66
Y WV LLH+LP D S F P++ +YQQALLL+ A A L L L+F+ Y
Sbjct: 6 YAAPWWVSLLHRLPHFDLSWEATSSQFRPEDTDYQQALLLLGAAALACLALDLLFLLFYS 65
Query: 67 IRFCCCRPPEPPGSKIPSPGGGCVTWSCIVALLAGCTGIGIGFYGNSETSDGVSQLSSAL 126
CC R C W I+A L GI +GFYGN ETSDG+ + + +L
Sbjct: 66 FWLCCRRRKSEEHLDADCC---CTAWCVIIATLVCSAGIAVGFYGNGETSDGIHRATYSL 122
Query: 127 LHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTELVAAARGARRQAEAAAQQL 186
HAN T++ + V +T L L TLE L R E + A + + E
Sbjct: 123 RHANRTVAGVQDRVWDTAVGLNHTAEPSLQTLERQLAGRPEPLRAVQRLQGLLETLLGYT 182
Query: 187 QGLAFWQGVPLSPLQVAENVSFVEEYRWLAYVLLLLLELLVCLFTLLGLAKQSKWLVIVM 246
+ FW+ +S +AE V + YRWL Y+ LLLL++++CL L+GL + SK +++ +
Sbjct: 183 AAIPFWRNTAVSLEVLAEQVDLYDWYRWLGYLGLLLLDVIICLLVLVGLIRSSKGILVGV 242
Query: 247 TVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYYLLCNRA 306
++ +L LV+SWG++GLE A +VG SDFC +PD YV + +E + LS DIL YYL C+
Sbjct: 243 CLLGVLALVISWGALGLELAVSVGSSDFCVDPDAYVTKMVEEYSVLSGDILQYYLACSPR 302
Query: 307 VSNPFQQRLTLSQRALANIHSQLLGLEREAVPQFPSAQKPLLSLEETLNVTEGNFHQLVA 366
+NPFQQ+L+ S +AL + + L R + P+ + PLL ++E LN TE N L A
Sbjct: 303 AANPFQQKLSGSHKALVEMQDVVAELLRTVPWEQPATKDPLLRVQEVLNGTEVNLQHLTA 362
Query: 367 LLHCRSLHKDYGAALRGLCEDALEGLLFLLLFSLLSAGALATALCSLPRAW 417
L+ CRSLH DY AL G C D +EGL++L LFS ++A ++ +CS+P W
Sbjct: 363 LVDCRSLHLDYVQALTGFCYDGVEGLIYLALFSFVTALMFSSIVCSVPHTW 413
>gi|53988387 tweety 2 isoform 2 [Homo sapiens]
Length = 213
Score = 120 bits (301), Expect = 3e-27
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 328 QLLGLEREAVPQFPSAQKPLLSLEETLNVTEGNFHQLVALLHCRSLHKDYGAALRGLCED 387
Q+ GL + AVP F +A++ LL+++ LN +E + HQL A++ CR LHKDY AL G+C D
Sbjct: 4 QVAGLLQFAVPLFSTAEEDLLAIQLLLNSSESSLHQLTAMVDCRGLHKDYLDALAGICYD 63
Query: 388 ALEGLLFLLLFSLLSAGALATALCSLPRAWALFPPSD-DYDDTDDDDPFNPQ 438
L+GLL+L LFS L+A A +T +C+ PRAW F + DYDD DDDDPFNPQ
Sbjct: 64 GLQGLLYLGLFSFLAALAFSTMICAGPRAWKHFTTRNRDYDDIDDDDPFNPQ 115
>gi|197313787 desmoglein 4 isoform 1 [Homo sapiens]
Length = 1059
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 51 AGLG---LGLSLIFIAVYLIRFCCCRPPEPPG---SKIPSPGGG 88
AG+G LG+ L+ +A L+ CCC+ +P G P P GG
Sbjct: 631 AGIGMMVLGILLLILAPLLLLLCCCKQRQPEGLGTRFAPVPEGG 674
>gi|29789445 desmoglein 4 isoform 2 [Homo sapiens]
Length = 1040
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 51 AGLG---LGLSLIFIAVYLIRFCCCRPPEPPG---SKIPSPGGG 88
AG+G LG+ L+ +A L+ CCC+ +P G P P GG
Sbjct: 631 AGIGMMVLGILLLILAPLLLLLCCCKQRQPEGLGTRFAPVPEGG 674
>gi|109255239 centrosomal protein 63 isoform b [Homo sapiens]
Length = 541
Score = 30.8 bits (68), Expect = 2.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 119 VSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTL------EEVLEPRTELVAAA 172
+ LSS L AN T+ + + R+ + V T +T L EE L +L+ A
Sbjct: 206 IQHLSSKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEAL 265
Query: 173 RGARRQAEAAAQQLQGL 189
+ +R+ +AA Q + L
Sbjct: 266 QEEKRELKAALQSQENL 282
>gi|22095367 centrosomal protein 63 isoform a [Homo sapiens]
Length = 703
Score = 30.8 bits (68), Expect = 2.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 119 VSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTL------EEVLEPRTELVAAA 172
+ LSS L AN T+ + + R+ + V T +T L EE L +L+ A
Sbjct: 206 IQHLSSKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEAL 265
Query: 173 RGARRQAEAAAQQLQGL 189
+ +R+ +AA Q + L
Sbjct: 266 QEEKRELKAALQSQENL 282
>gi|109255236 centrosomal protein 63 isoform d [Homo sapiens]
Length = 475
Score = 30.8 bits (68), Expect = 2.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 119 VSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTL------EEVLEPRTELVAAA 172
+ LSS L AN T+ + + R+ + V T +T L EE L +L+ A
Sbjct: 206 IQHLSSKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEAL 265
Query: 173 RGARRQAEAAAQQLQGL 189
+ +R+ +AA Q + L
Sbjct: 266 QEEKRELKAALQSQENL 282
>gi|109255226 centrosomal protein 63 isoform c [Homo sapiens]
Length = 495
Score = 30.8 bits (68), Expect = 2.6
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 119 VSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTL------EEVLEPRTELVAAA 172
+ LSS L AN T+ + + R+ + V T +T L EE L +L+ A
Sbjct: 206 IQHLSSKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEAL 265
Query: 173 RGARRQAEAAAQQLQGL 189
+ +R+ +AA Q + L
Sbjct: 266 QEEKRELKAALQSQENL 282
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1344 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1394
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1348 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1398
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1344 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1394
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1312 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1362
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1481 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1531
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1322 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1372
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1330 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1380
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 141 LETVERLGEAVRTE----LTTLEEVLEPRTELVAAARGARRQAEAAAQQLQ 187
+E ERL E R E L +E LE + +L A A+ QAE A++LQ
Sbjct: 1371 MEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQ 1421
>gi|110347433 glycine receptor, alpha 3 isoform b [Homo sapiens]
Length = 449
Score = 30.8 bits (68), Expect = 2.6
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 178 QAEAAAQQLQGLAF-WQGVPLSPLQVAENVSF----VEEYRWLAYVLLLL-LELLVCLFT 231
Q E+ + L F WQ +P+QVAE ++ ++E + L Y C+
Sbjct: 188 QLESFGYTMNDLIFEWQDE--APVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEV 245
Query: 232 LLGLAKQSKWLVIVMTVMSLLVLVLSWGSMGLE-----AATAVGLSDFCSNPDPYVLNLT 286
L +Q + +I M + SLL+++LSW S + A A+G++ VL +T
Sbjct: 246 RFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT--------VLTMT 297
Query: 287 QEETG 291
+ +G
Sbjct: 298 TQSSG 302
>gi|110347441 glycine receptor, alpha 3 isoform a [Homo sapiens]
Length = 464
Score = 30.8 bits (68), Expect = 2.6
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 178 QAEAAAQQLQGLAF-WQGVPLSPLQVAENVSF----VEEYRWLAYVLLLL-LELLVCLFT 231
Q E+ + L F WQ +P+QVAE ++ ++E + L Y C+
Sbjct: 188 QLESFGYTMNDLIFEWQDE--APVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEV 245
Query: 232 LLGLAKQSKWLVIVMTVMSLLVLVLSWGSMGLE-----AATAVGLSDFCSNPDPYVLNLT 286
L +Q + +I M + SLL+++LSW S + A A+G++ VL +T
Sbjct: 246 RFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT--------VLTMT 297
Query: 287 QEETG 291
+ +G
Sbjct: 298 TQSSG 302
>gi|169646728 glycine receptor, alpha 2 isoform B [Homo sapiens]
Length = 452
Score = 29.6 bits (65), Expect = 5.8
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 199 PLQVAENVSF----VEEYRWLAYVLLLL-LELLVCLFTLLGLAKQSKWLVIVMTVMSLLV 253
P+QVAE ++ ++E + L Y C+ L +Q + +I M + SLL+
Sbjct: 209 PVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLI 268
Query: 254 LVLSWGSMGLE-----AATAVGLSDFCSNPDPYVLNLTQEETG 291
++LSW S + A A+G++ VL +T + +G
Sbjct: 269 VILSWVSFWINMDAAPARVALGITT--------VLTMTTQSSG 303
>gi|169646723 glycine receptor, alpha 2 isoform A [Homo sapiens]
Length = 452
Score = 29.6 bits (65), Expect = 5.8
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 199 PLQVAENVSF----VEEYRWLAYVLLLL-LELLVCLFTLLGLAKQSKWLVIVMTVMSLLV 253
P+QVAE ++ ++E + L Y C+ L +Q + +I M + SLL+
Sbjct: 209 PVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLI 268
Query: 254 LVLSWGSMGLE-----AATAVGLSDFCSNPDPYVLNLTQEETG 291
++LSW S + A A+G++ VL +T + +G
Sbjct: 269 VILSWVSFWINMDAAPARVALGITT--------VLTMTTQSSG 303
>gi|4504021 glycine receptor, alpha 2 isoform A [Homo sapiens]
Length = 452
Score = 29.6 bits (65), Expect = 5.8
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 199 PLQVAENVSF----VEEYRWLAYVLLLL-LELLVCLFTLLGLAKQSKWLVIVMTVMSLLV 253
P+QVAE ++ ++E + L Y C+ L +Q + +I M + SLL+
Sbjct: 209 PVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLI 268
Query: 254 LVLSWGSMGLE-----AATAVGLSDFCSNPDPYVLNLTQEETG 291
++LSW S + A A+G++ VL +T + +G
Sbjct: 269 VILSWVSFWINMDAAPARVALGITT--------VLTMTTQSSG 303
>gi|181337167 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 14 [Homo sapiens]
Length = 771
Score = 29.6 bits (65), Expect = 5.8
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 215 LAYVLLLLLELLVCLFTLLG---LAKQSKWLVIVMTVMSLLVLVL 256
+ +LL +L + C F + G +++QS W ++++ +M LL+ L
Sbjct: 567 ICVLLLFILMFIFCSFIIFGSDYISEQSWWAILLVVLMVLLISTL 611
>gi|169161779 PREDICTED: similar to nucleophosmin 1 [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 7.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 424 DDYDDTDDDDPFNPQESKRFVQWQSSI 450
DD DD DDDD F+ +E++ V + SI
Sbjct: 160 DDDDDDDDDDDFDDEEAEEKVPVKKSI 186
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 29.3 bits (64), Expect = 7.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 262 GLEAATAVGLSDFCSNPDPYVLNLTQEETGLSSDILSYY--LLCNRAVSNP 310
G T G D C+ P P++L L +ETG + +S + LC R S P
Sbjct: 565 GCVDGTPPGQLDACAAPTPHLLFLCSQETGGAGASISGFPEWLCGRDSSRP 615
>gi|169161624 PREDICTED: similar to nucleophosmin 1 [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 7.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 424 DDYDDTDDDDPFNPQESKRFVQWQSSI 450
DD DD DDDD F+ +E++ V + SI
Sbjct: 160 DDDDDDDDDDDFDDEEAEEKVPVKKSI 186
>gi|169162829 PREDICTED: similar to nucleophosmin 1 [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 7.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 424 DDYDDTDDDDPFNPQESKRFVQWQSSI 450
DD DD DDDD F+ +E++ V + SI
Sbjct: 160 DDDDDDDDDDDFDDEEAEEKVPVKKSI 186
>gi|52317134 olfactory receptor, family 5, subfamily M, member 3
[Homo sapiens]
Length = 307
Score = 29.3 bits (64), Expect = 7.6
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 230 FTLLGLAKQSKWLVIVMTVMSLLVLVLSWGSMGLEAATAVGLSDFCSNPDPYVL-NLTQE 288
F LLGL + +W V+ + ++ ++ G++G+ + +S +NP + L +L+
Sbjct: 10 FILLGLTSRREWQVLFFIIFLVVYIITMVGNIGM--MVLIKVSPQLNNPMYFFLSHLSFV 67
Query: 289 ETGLSSDILSYYLLCNRAVSNPFQQRLTLSQRA--------LANIHSQLLGLEREAVPQF 340
+ SS++ + + N F + T++ +A +H ++ L A ++
Sbjct: 68 DVWFSSNVTP------KMLENLFSDKKTITYAGCLVQCFFFIALVHVEIFILAAMAFDRY 121
Query: 341 PSAQKPLL 348
+ PLL
Sbjct: 122 MAIGNPLL 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,382,036
Number of Sequences: 37866
Number of extensions: 840123
Number of successful extensions: 3322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3264
Number of HSP's gapped (non-prelim): 79
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.