Guide to the Human Genome
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Name: TTYH2 Sequence: fasta or formatted (213aa) NCBI GI: 53988387
Description:

tweety 2 isoform 2

Referenced in:

Chloride Channels

Other entries for this name:
alt prot [534aa] tweety 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         22           2
 C cysteine            1.9          4           1
 D aspartate           6.1         13           4
 E glutamate           2.8          6           2
 F phenylalanine       4.7         10           1
 G glycine             6.1         13           1
 H histidine           3.3          7           1
 I isoleucine          3.3          7           1
 K lysine              0.9          2           1
 L leucine            12.7         27           3
 M methionine          3.3          7           1
 N asparagine          3.8          8           1
 P proline             7.5         16           3
 Q glutamine           6.1         13           1
 R arginine            5.2         11           1
 S serine              9.4         20           2
 T threonine           4.2          9           2
 V valine              2.8          6           1
 W tryptophan          0.9          2           1
 Y tyrosine            4.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tweety 2 isoform 2 
TTYH2                 1.000   tweety 2 isoform 1 
TTYH3                 0.343   tweety 3 
TTYH1                 0.229   tweety 1 isoform 1 
TTYH1                 0.179   tweety 1 isoform 2 
BSN                   0.019   bassoon protein 
CNTN2                 0.017   contactin 2 precursor 
ZFR2                  0.014   zinc finger RNA binding protein 2 isoform 1 
ZNF366                0.012   zinc finger protein 366 
KIF3C                 0.012   kinesin family member 3C 
NFATC4                0.010   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.010   nuclear factor of activated T-cells, cytoplasmic, ca...
LOC729159             0.010   PREDICTED: UPF0607 protein ENSP00000381418-like [Ho...
ODZ2                  0.010   odz, odd Oz/ten-m homolog 2 
SOX10                 0.007   SRY (sex determining region Y)-box 10 
FAM83D                0.007   hypothetical protein LOC81610 
FAM90A20              0.005   PREDICTED: hypothetical protein 
MAGEC1                0.005   melanoma antigen family C, 1 
CLNS1A                0.005   chloride channel, nucleotide-sensitive, 1A 
FGD6                  0.005   FYVE, RhoGEF and PH domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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