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Search of human proteins with 101943240
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|101943240 general transcription factor IIIC, polypeptide 1,
alpha 220kDa [Homo sapiens]
(2109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|101943240 general transcription factor IIIC, polypeptide 1, a... 4233 0.0
gi|40556370 PHD finger protein 15 [Homo sapiens] 45 6e-04
gi|55741849 WD repeat domain 22 [Homo sapiens] 42 0.006
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 42 0.008
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 42 0.008
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 42 0.008
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.011
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 41 0.014
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 41 0.014
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 40 0.018
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 40 0.018
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 40 0.018
gi|7662162 ALEX2 protein [Homo sapiens] 40 0.018
gi|29540562 ALEX2 protein [Homo sapiens] 40 0.018
gi|119395716 forkhead box C1 [Homo sapiens] 39 0.041
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 39 0.041
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.041
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 39 0.041
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 39 0.041
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 39 0.041
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 39 0.041
gi|146219832 myosin light chain kinase 3 [Homo sapiens] 39 0.041
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 39 0.054
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.054
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.054
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.054
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.054
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ... 39 0.054
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 39 0.054
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.054
>gi|101943240 general transcription factor IIIC, polypeptide 1, alpha
220kDa [Homo sapiens]
Length = 2109
Score = 4233 bits (10978), Expect = 0.0
Identities = 2109/2109 (100%), Positives = 2109/2109 (100%)
Query: 1 MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFY 60
MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFY
Sbjct: 1 MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFY 60
Query: 61 EEPRERPDLQLQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKER 120
EEPRERPDLQLQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKER
Sbjct: 61 EEPRERPDLQLQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKER 120
Query: 121 KNITNDIRTKSLQPRCTMVEAFDRWGKKLIIVASQAMRYRALIGQEGDPDLKLPDFSYCI 180
KNITNDIRTKSLQPRCTMVEAFDRWGKKLIIVASQAMRYRALIGQEGDPDLKLPDFSYCI
Sbjct: 121 KNITNDIRTKSLQPRCTMVEAFDRWGKKLIIVASQAMRYRALIGQEGDPDLKLPDFSYCI 180
Query: 181 LERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSI 240
LERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSI
Sbjct: 181 LERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSI 240
Query: 241 LLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLREELGLCERTFKRLYQYMLNA 300
LLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLREELGLCERTFKRLYQYMLNA
Sbjct: 241 LLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLREELGLCERTFKRLYQYMLNA 300
Query: 301 GLAKVVSLRLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRNDHDDDEDEEVISKTVPPV 360
GLAKVVSLRLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRNDHDDDEDEEVISKTVPPV
Sbjct: 301 GLAKVVSLRLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRNDHDDDEDEEVISKTVPPV 360
Query: 361 DIVFERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDE 420
DIVFERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDE
Sbjct: 361 DIVFERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDE 420
Query: 421 GRQRTTKYISCVFAEESDLSRQYQREKARSELLTTVSLASMQEESLLPEGEDTFLSESDS 480
GRQRTTKYISCVFAEESDLSRQYQREKARSELLTTVSLASMQEESLLPEGEDTFLSESDS
Sbjct: 421 GRQRTTKYISCVFAEESDLSRQYQREKARSELLTTVSLASMQEESLLPEGEDTFLSESDS 480
Query: 481 EEERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAE 540
EEERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAE
Sbjct: 481 EEERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAE 540
Query: 541 ERACQSLASRDSLLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRMENPKESSSSLKTGR 600
ERACQSLASRDSLLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRMENPKESSSSLKTGR
Sbjct: 541 ERACQSLASRDSLLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRMENPKESSSSLKTGR 600
Query: 601 HSSGQDKPHETYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIV 660
HSSGQDKPHETYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIV
Sbjct: 601 HSSGQDKPHETYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIV 660
Query: 661 RLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSSTA 720
RLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSSTA
Sbjct: 661 RLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSSTA 720
Query: 721 NRVKTSQPPVPQGEAEEDSQGKEGPSGSGDSQLSASSRSESGRMKKSDNKMGITPLRNYH 780
NRVKTSQPPVPQGEAEEDSQGKEGPSGSGDSQLSASSRSESGRMKKSDNKMGITPLRNYH
Sbjct: 721 NRVKTSQPPVPQGEAEEDSQGKEGPSGSGDSQLSASSRSESGRMKKSDNKMGITPLRNYH 780
Query: 781 PIVVPGLGRSLGFLPKMPRLRVVHMFLWYLIYGHPASNTVEKPSFISERRTIKQESGRAG 840
PIVVPGLGRSLGFLPKMPRLRVVHMFLWYLIYGHPASNTVEKPSFISERRTIKQESGRAG
Sbjct: 781 PIVVPGLGRSLGFLPKMPRLRVVHMFLWYLIYGHPASNTVEKPSFISERRTIKQESGRAG 840
Query: 841 VRPSSSGSAWEACSEAPSKGSQDGVTWEAEVELATETVYVDDASWMRYIPPIPVHRDFGF 900
VRPSSSGSAWEACSEAPSKGSQDGVTWEAEVELATETVYVDDASWMRYIPPIPVHRDFGF
Sbjct: 841 VRPSSSGSAWEACSEAPSKGSQDGVTWEAEVELATETVYVDDASWMRYIPPIPVHRDFGF 900
Query: 901 GWALVSDILLCLPLSIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLYKRR 960
GWALVSDILLCLPLSIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLYKRR
Sbjct: 901 GWALVSDILLCLPLSIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLYKRR 960
Query: 961 YIFSVVENLQRLCYMGLLQFGPTEKFQDKDQVFIFLKKNAVIVDTTICDPHYNLARSSRP 1020
YIFSVVENLQRLCYMGLLQFGPTEKFQDKDQVFIFLKKNAVIVDTTICDPHYNLARSSRP
Sbjct: 961 YIFSVVENLQRLCYMGLLQFGPTEKFQDKDQVFIFLKKNAVIVDTTICDPHYNLARSSRP 1020
Query: 1021 FERRLYVLNSMQDVENYWFDLQCVCLNTPLGVVRCPRVRKNSSTDQGSDEEGSLQKEQES 1080
FERRLYVLNSMQDVENYWFDLQCVCLNTPLGVVRCPRVRKNSSTDQGSDEEGSLQKEQES
Sbjct: 1021 FERRLYVLNSMQDVENYWFDLQCVCLNTPLGVVRCPRVRKNSSTDQGSDEEGSLQKEQES 1080
Query: 1081 AMDKHNLERKCAMLEYTTGSREVVDEGLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQ 1140
AMDKHNLERKCAMLEYTTGSREVVDEGLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQ
Sbjct: 1081 AMDKHNLERKCAMLEYTTGSREVVDEGLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQ 1140
Query: 1141 AKKENTAAENGLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDRE 1200
AKKENTAAENGLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDRE
Sbjct: 1141 AKKENTAAENGLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDRE 1200
Query: 1201 PSLDRNRRVRGGKSQKRKRLKKDPGKKIKRKKKGEFPGEKSKRLRYHDEADQSALQRMTR 1260
PSLDRNRRVRGGKSQKRKRLKKDPGKKIKRKKKGEFPGEKSKRLRYHDEADQSALQRMTR
Sbjct: 1201 PSLDRNRRVRGGKSQKRKRLKKDPGKKIKRKKKGEFPGEKSKRLRYHDEADQSALQRMTR 1260
Query: 1261 LRVTWSMQEDGLLVLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRA 1320
LRVTWSMQEDGLLVLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRA
Sbjct: 1261 LRVTWSMQEDGLLVLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRA 1320
Query: 1321 RYIVKNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSS 1380
RYIVKNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSS
Sbjct: 1321 RYIVKNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSS 1380
Query: 1381 ALRNSNLEIPDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALS 1440
ALRNSNLEIPDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALS
Sbjct: 1381 ALRNSNLEIPDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALS 1440
Query: 1441 DSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVPMS 1500
DSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVPMS
Sbjct: 1441 DSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVPMS 1500
Query: 1501 YQLSQTYYRIFTWRFPSTICTESFQFLDRMRAAGKLDQPDRFSFKDQDNNEPTNDMVAFS 1560
YQLSQTYYRIFTWRFPSTICTESFQFLDRMRAAGKLDQPDRFSFKDQDNNEPTNDMVAFS
Sbjct: 1501 YQLSQTYYRIFTWRFPSTICTESFQFLDRMRAAGKLDQPDRFSFKDQDNNEPTNDMVAFS 1560
Query: 1561 LDGPGGNCVAVLTLFSLGLISVDVRIPEQIIVVDSSMVENEVIKSLGKDGSLEDDEDEED 1620
LDGPGGNCVAVLTLFSLGLISVDVRIPEQIIVVDSSMVENEVIKSLGKDGSLEDDEDEED
Sbjct: 1561 LDGPGGNCVAVLTLFSLGLISVDVRIPEQIIVVDSSMVENEVIKSLGKDGSLEDDEDEED 1620
Query: 1621 DLDEGVGGKRRSMEVKPAQASHTNYLLMRGYYSPGIVSTRNLNPNDSIVVNSCQMKFQLR 1680
DLDEGVGGKRRSMEVKPAQASHTNYLLMRGYYSPGIVSTRNLNPNDSIVVNSCQMKFQLR
Sbjct: 1621 DLDEGVGGKRRSMEVKPAQASHTNYLLMRGYYSPGIVSTRNLNPNDSIVVNSCQMKFQLR 1680
Query: 1681 CTPVPARLRPAAAPLEELTMGTSCLPDTFTKLINPQENTCSLEEFVLQLELSGYSPEDLT 1740
CTPVPARLRPAAAPLEELTMGTSCLPDTFTKLINPQENTCSLEEFVLQLELSGYSPEDLT
Sbjct: 1681 CTPVPARLRPAAAPLEELTMGTSCLPDTFTKLINPQENTCSLEEFVLQLELSGYSPEDLT 1740
Query: 1741 AALEILEAIIATGCFGIDKEELRRRFSALEKAGGGRTRTFADCIQALLEQHQVLEVGGNT 1800
AALEILEAIIATGCFGIDKEELRRRFSALEKAGGGRTRTFADCIQALLEQHQVLEVGGNT
Sbjct: 1741 AALEILEAIIATGCFGIDKEELRRRFSALEKAGGGRTRTFADCIQALLEQHQVLEVGGNT 1800
Query: 1801 ARLVAMGSAWPWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGT 1860
ARLVAMGSAWPWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGT
Sbjct: 1801 ARLVAMGSAWPWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGT 1860
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA
Sbjct: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
Query: 1921 AAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARERDCESV 1980
AAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARERDCESV
Sbjct: 1921 AAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARERDCESV 1980
Query: 1981 CFIGRPWRVVDGHLNLPVCKGMMEAMLYHIMTRPGIPESSLLRHYQGVLQPVAVLELLQG 2040
CFIGRPWRVVDGHLNLPVCKGMMEAMLYHIMTRPGIPESSLLRHYQGVLQPVAVLELLQG
Sbjct: 1981 CFIGRPWRVVDGHLNLPVCKGMMEAMLYHIMTRPGIPESSLLRHYQGVLQPVAVLELLQG 2040
Query: 2041 LESLGCIRKRWLRKPRPVSLFSTPVVEEVEVPSSLDESPMAFYEPTLDCTLRLGRVFPHE 2100
LESLGCIRKRWLRKPRPVSLFSTPVVEEVEVPSSLDESPMAFYEPTLDCTLRLGRVFPHE
Sbjct: 2041 LESLGCIRKRWLRKPRPVSLFSTPVVEEVEVPSSLDESPMAFYEPTLDCTLRLGRVFPHE 2100
Query: 2101 VNWNKWIHL 2109
VNWNKWIHL
Sbjct: 2101 VNWNKWIHL 2109
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 45.4 bits (106), Expect = 6e-04
Identities = 43/162 (26%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARP------------LEGSSSEDSPPEGQAPPSHSPR 1858
P LL L+D E DP RP L PP P S +
Sbjct: 562 PGLLSEELLQDEETLLSFMRDPSLRPGDPARKARGRTRLPAKKKPPPPPPQDGPGSRTTP 621
Query: 1859 GTKRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALED 1918
+ +W + G +G Q P ++P + S+ PS + A SPPP +
Sbjct: 622 DKAPKKTWGQDAGS--GKGGQGPPTRKPPRRTSSHLPSSPAAGDCPILATPESPPPLAPE 679
Query: 1919 T---AAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPR 1957
T AA+ AA D + G +SP + G+ +PP S+ R
Sbjct: 680 TPDEAASVAADSDVQVPGPAASP---KPLGRLRPPRESKVTR 718
>gi|55741849 WD repeat domain 22 [Homo sapiens]
Length = 942
Score = 42.0 bits (97), Expect = 0.006
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 1809 AWPWLLHSV----RLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRA 1864
A+ WL +S KD E + + E + R G+S +D+P PS S A
Sbjct: 663 AYKWLRYSYISYSNNKDGETSLVTGEADEGRA--GTSHKDNPA-----PSSSKEACLNIA 715
Query: 1865 SWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGA 1924
A N + EG K +++ PS GPG E + A A P +DT +G+
Sbjct: 716 M-AQRNQDLPPEGCSKDTFK----EETPRTPSNGPGHEHSSHAWAEVPEGTSQDTGNSGS 770
Query: 1925 AQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPR--GFTESFGAANI----SQAARERDCE 1978
E E + LS +A+ P P+ G T + G+ N S + ER E
Sbjct: 771 V----EHPFETKKLNGKALSSRAEEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLE 826
Query: 1979 SVC 1981
++C
Sbjct: 827 TIC 829
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 1818 RLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEG 1877
++++ E+ +ED PL E+ + +A + +S D+
Sbjct: 1203 KIQESEETVEPKED---MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSN 1259
Query: 1878 TQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAP--SPPPALEDTAAAGAAQE-----DQE 1930
+ T K P +++ P + E Q P P E+ AAA AQ D E
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDE 1319
Query: 1931 GVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARER 1975
G S +++L Q + E+P G ESF AN+ Q +RE+
Sbjct: 1320 DDGHLESTKKKELEEQPTREDVKEEP-GVQESFLDANM-QKSREK 1362
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 1818 RLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEG 1877
++++ E+ +ED PL E+ + +A + +S D+
Sbjct: 1203 KIQESEETVEPKED---MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSN 1259
Query: 1878 TQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAP--SPPPALEDTAAAGAAQE-----DQE 1930
+ T K P +++ P + E Q P P E+ AAA AQ D E
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDE 1319
Query: 1931 GVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARER 1975
G S +++L Q + E+P G ESF AN+ Q +RE+
Sbjct: 1320 DDGHLESTKKKELEEQPTREDVKEEP-GVQESFLDANM-QKSREK 1362
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 1818 RLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEG 1877
++++ E+ +ED PL E+ + +A + +S D+
Sbjct: 1203 KIQESEETVEPKED---MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADSSN 1259
Query: 1878 TQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAP--SPPPALEDTAAAGAAQE-----DQE 1930
+ T K P +++ P + E Q P P E+ AAA AQ D E
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDE 1319
Query: 1931 GVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAARER 1975
G S +++L Q + E+P G ESF AN+ Q +RE+
Sbjct: 1320 DDGHLESTKKKELEEQPTREDVKEEP-GVQESFLDANM-QKSREK 1362
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 41.2 bits (95), Expect = 0.011
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 1832 PQARPLEGSS--SEDSPPEGQAPPS-----HSPRGTKRRASWASENGET-DAEGTQMTPA 1883
PQ PL S ++SPP +PP+ SP + S+ E + E +++
Sbjct: 1022 PQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEP 1081
Query: 1884 KRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQL 1943
+ PAL+ S +P P + APSP PAL+D + G ED + +PG +
Sbjct: 1082 ECPALEPSATSPLPSPMGD--LSCPAPSPAPALDDFSGLG---EDTAPLDGIDAPGSQPE 1136
Query: 1944 SGQAQPPEGSE 1954
GQ SE
Sbjct: 1137 PGQTPGSLASE 1147
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 40.8 bits (94), Expect = 0.014
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 7/134 (5%)
Query: 1823 EDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTP 1882
E+A + + P A+ G S E++P E Q PPS + ++ T+A +
Sbjct: 553 EEAPAEVQSPSAK---GVSIEEAPLELQ-PPSGEETTAEEASAAIQLLAATEASAEEAPA 608
Query: 1883 AKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQ 1942
+P + A P AE EA A PP E+ A +E E P E+
Sbjct: 609 EVQPPPAEEAPAEVQPPPAE---EAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEE 665
Query: 1943 LSGQAQPPEGSEDP 1956
+ QPP E P
Sbjct: 666 APAEVQPPPAEEAP 679
Score = 38.9 bits (89), Expect = 0.054
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Query: 1825 ADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGE-TDAE----GTQ 1879
AD + Q+ E +S+E++P E Q+P + + +GE T AE Q
Sbjct: 535 ADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQ 594
Query: 1880 MTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPG 1939
+ A + +++ P E AE Q PPPA E+ A +E E P
Sbjct: 595 LLAATEASAEEAPAEVQPPPAEEAPAEVQ---PPPA-EEAPAEVQPPPAEEAPAEVQPPP 650
Query: 1940 QEQLSGQAQPPEGSEDP 1956
E+ + QPP E P
Sbjct: 651 AEEAPAEVQPPPAEEAP 667
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 40.8 bits (94), Expect = 0.014
Identities = 41/138 (29%), Positives = 49/138 (35%), Gaps = 25/138 (18%)
Query: 1836 PLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETD--AEGTQMTPAKRPALQDSNL 1893
P +S+ D + P H P T AS E E AEGT P + +
Sbjct: 1981 PSASASTLDQSKDPGPPRPHRPEATPSMASLGPEGEELARVAEGTSFPPQEPRHSPQVKM 2040
Query: 1894 APS--------------LGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSP- 1938
AP+ LG GAE + P D A AA E Q SSP
Sbjct: 2041 APTSSPAEPHCWPAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQP----LSSPP 2096
Query: 1939 ----GQEQLSGQAQPPEG 1952
+ SG AQPPEG
Sbjct: 2097 TAASSKAPSSGSAQPPEG 2114
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 40.4 bits (93), Expect = 0.018
Identities = 47/155 (30%), Positives = 55/155 (35%), Gaps = 21/155 (13%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
P A+ L GS P PP P G R G G P + A +
Sbjct: 535 PGAKGLTGSPGSPGPDGKTGPPG--PAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEP 592
Query: 1892 NLAP---------SLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQ 1942
A ++GP +DG EA A PP AG A E E G SPG +
Sbjct: 593 GKAGERGVPGPPGAVGPAGKDG-EAGAQGPP------GPAGPAGERGEQ-GPAGSPGFQG 644
Query: 1943 LSGQAQPP--EGSEDPRGFTESFGAANISQAARER 1975
L G A PP G +G GA S A ER
Sbjct: 645 LPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 679
Score = 32.3 bits (72), Expect = 5.0
Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 12/138 (8%)
Query: 1848 EGQAPPSHSPRGTKRRASWASENGE---TDAEGTQMTPAK--RPALQDSNLAPSLG---- 1898
+G+A P PRG++ E G A G P +P + +N AP +
Sbjct: 352 KGEAGPQ-GPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPG 410
Query: 1899 -PGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEGSEDPR 1957
PGA + Q P PP + + A + G PG + G P G E R
Sbjct: 411 FPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG-PPGPAGEEGKR 469
Query: 1958 GFTESFGAANISQAARER 1975
G G + ER
Sbjct: 470 GARGEPGPTGLPGPPGER 487
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 40.4 bits (93), Expect = 0.018
Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 27/135 (20%)
Query: 1832 PQARPLEGSSSEDSPP---EGQAPP-----SHSPRGTKRRASWASENGETDAEGTQMTPA 1883
PQ P +G + PP + Q PP S SPR + G +G P
Sbjct: 78 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPG 137
Query: 1884 KRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQL 1943
K GP + G + Q P PP + G D + S PG+
Sbjct: 138 K-----------PQGPPPQGGNKPQGPPPPGKPQGPPPQG----DNKSRSSRSPPGKP-- 180
Query: 1944 SGQAQPPEGSEDPRG 1958
Q PP+G P+G
Sbjct: 181 --QGPPPQGGNQPQG 193
Score = 40.4 bits (93), Expect = 0.018
Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 10/127 (7%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP P P+G + S S G+ +G +P
Sbjct: 201 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK--PQGPPPQGGNQPQGPPP 258
Query: 1892 NLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPE 1951
GP + G + Q P PP + G ++ S PG+ Q PP+
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSR----SPPGKP----QGPPPQ 310
Query: 1952 GSEDPRG 1958
G P+G
Sbjct: 311 GGNQPQG 317
Score = 34.3 bits (77), Expect = 1.3
Identities = 30/126 (23%), Positives = 41/126 (32%), Gaps = 37/126 (29%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP P P+G + S S G+
Sbjct: 325 PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQ----------------- 367
Query: 1892 NLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPE 1951
GP ++G Q P PP A G Q+ Q +P Q G +PP+
Sbjct: 368 ------GPPQQEGNNPQGPPPP-------AGGNPQQPQ-------APPAGQPQGPPRPPQ 407
Query: 1952 GSEDPR 1957
G R
Sbjct: 408 GGRPSR 413
Score = 33.5 bits (75), Expect = 2.3
Identities = 30/140 (21%), Positives = 44/140 (31%), Gaps = 31/140 (22%)
Query: 1819 LKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGT 1878
+ E + +PQ P +G + PP P P G +G
Sbjct: 23 VSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPP-----------PQGGNQPQGP 71
Query: 1879 QMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSP 1938
P K GP + G + Q P PP + G + + S P
Sbjct: 72 PPPPGK-----------PQGPPPQGGNKPQGPPPPGKPQ-----GPPPQGDKSRSPRSPP 115
Query: 1939 GQEQLSGQAQPPEGSEDPRG 1958
G+ Q PP+G P+G
Sbjct: 116 GKP----QGPPPQGGNQPQG 131
Score = 33.5 bits (75), Expect = 2.3
Identities = 29/140 (20%), Positives = 41/140 (29%), Gaps = 36/140 (25%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP P P+G + S S G+
Sbjct: 139 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQ----------------- 181
Query: 1892 NLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQ-------------EGVGEFSSP 1938
GP + G + Q P PPP + Q +G + S
Sbjct: 182 ------GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSA 235
Query: 1939 GQEQLSGQAQPPEGSEDPRG 1958
Q PP+G P+G
Sbjct: 236 RSPPGKPQGPPPQGGNQPQG 255
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 40.4 bits (93), Expect = 0.018
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 23/134 (17%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP P P+G K R S S G+ Q + P Q
Sbjct: 57 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR-SPRSPPGKPQGPPPQGGKPQGPPAQGG 115
Query: 1892 NLAPSL--------GPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQL 1943
+ + S GP ++G Q P PP A G Q+ Q +P Q
Sbjct: 116 SKSQSARSPPGKPQGPPQQEGNNPQGPPPP-------AGGNPQQPQ-------APPAGQP 161
Query: 1944 SGQAQPPEGSEDPR 1957
G +PP+G R
Sbjct: 162 QGPPRPPQGGRPSR 175
>gi|7662162 ALEX2 protein [Homo sapiens]
Length = 632
Score = 40.4 bits (93), Expect = 0.018
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 1833 QARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSN 1892
+A+ GS ++++ G P + S G ++ A G T+A G PA A
Sbjct: 106 EAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGA----- 160
Query: 1893 LAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEG 1952
P + + ++A PP + T AA A E EG G + + G A P E
Sbjct: 161 --PKVAEAPREAETSRAAVPPGTVVPTEAA-APTEVTEGPGVAAPTKVAEAPGVASPTEA 217
Query: 1953 SEDPRGFTESFGAA 1966
+E P T + AA
Sbjct: 218 AEAPVPATPTGAAA 231
Score = 35.4 bits (80), Expect = 0.60
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 1852 PPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAED-GAEAQAP 1910
P + + GT RA G T G+ +P + + A + GAEA AP
Sbjct: 41 PKNRAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAP 100
Query: 1911 SPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQ-----PPEGSEDPRGFTES--- 1962
+ A A +GA + QE G P E + G A PP G + G E+
Sbjct: 101 AASSA---EAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAM 157
Query: 1963 FGAANISQAARERD 1976
GA +++A RE +
Sbjct: 158 AGAPKVAEAPREAE 171
>gi|29540562 ALEX2 protein [Homo sapiens]
Length = 632
Score = 40.4 bits (93), Expect = 0.018
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 1833 QARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSN 1892
+A+ GS ++++ G P + S G ++ A G T+A G PA A
Sbjct: 106 EAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAMAGA----- 160
Query: 1893 LAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQPPEG 1952
P + + ++A PP + T AA A E EG G + + G A P E
Sbjct: 161 --PKVAEAPREAETSRAAVPPGTVVPTEAA-APTEVTEGPGVAAPTKVAEAPGVASPTEA 217
Query: 1953 SEDPRGFTESFGAA 1966
+E P T + AA
Sbjct: 218 AEAPVPATPTGAAA 231
Score = 35.4 bits (80), Expect = 0.60
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 1852 PPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAED-GAEAQAP 1910
P + + GT RA G T G+ +P + + A + GAEA AP
Sbjct: 41 PKNRAVAGTGARARAGLRAGFTIDLGSGFSPPTPVRAEAEDRAQDEASALDTVGAEAVAP 100
Query: 1911 SPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQ-----PPEGSEDPRGFTES--- 1962
+ A A +GA + QE G P E + G A PP G + G E+
Sbjct: 101 AASSA---EAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALGAAEAPAM 157
Query: 1963 FGAANISQAARERD 1976
GA +++A RE +
Sbjct: 158 AGAPKVAEAPREAE 171
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 39.3 bits (90), Expect = 0.041
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 1832 PQARPL--EGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTP---AKRP 1886
P ARPL +G+ S PP APP H +G S G + +++ A
Sbjct: 278 PSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAA 337
Query: 1887 ALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPG 1939
A + +AP L GA ++ S P T++AG++ G G G
Sbjct: 338 ASSRAGIAPPLALGAYSPGQSSLYSSP--CSQTSSAGSSGGGGGGAGAAGGAG 388
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 230 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 287
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 288 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 346
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 347 PAQAKPSGKAPQVRAASAPAKESPRKGAA 375
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 268 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 327
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 328 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 386
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 387 AQVQVGKQEEDSRSSSEESDSDREALA 413
Score = 36.2 bits (82), Expect = 0.35
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 40/189 (21%)
Query: 1839 GSSSEDSPPEGQAPPSHSPRGT--KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPS 1896
GS + P+G A +H+ G R + E +E + P++ +L + P
Sbjct: 1078 GSEEDGEGPQG-AKSAHTLVGPTPSRTETLVEETAAESSEDDVVAPSQ--SLLSGYMTPG 1134
Query: 1897 LGPGAEDGAEAQAPSPPPALEDTAAAG---AAQEDQEGVGEFS--------SP---GQEQ 1942
L P A +QA P L+ + + AA++D +G E SP G+E
Sbjct: 1135 LTP-----ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEA 1189
Query: 1943 LSGQA-----QPPEGSEDPRGFTESFGAANISQAARERDCESVCFIGRPWRVVDGHLNLP 1997
SG +P +G+ +P+ T + +NI+Q C +G+PW + + +
Sbjct: 1190 ASGTTPQKSRKPKKGAGNPQASTLAL-QSNITQ----------CLLGQPWPLNEAQVQAS 1238
Query: 1998 VCKGMMEAM 2006
V K + E +
Sbjct: 1239 VVKVLTELL 1247
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 756 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 815
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 816 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 867
Score = 32.7 bits (73), Expect = 3.9
Identities = 66/329 (20%), Positives = 116/329 (35%), Gaps = 47/329 (14%)
Query: 482 EERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAEE 541
EE S S S+++ A ++P + H + P K P+ PG
Sbjct: 788 EEDSGSSEEESDSEEEAETLAQVKPSGKTHQ---IRAALAPAKESPRKGAAPTPPGKTGP 844
Query: 542 RACQSLASRDS---------------LLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRM 586
A Q+ DS + ++ V +P + FV +
Sbjct: 845 SAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAA 904
Query: 587 ENPKESSSSLKTGRHSSGQDKPHETYRLLK------RRNLIIEAVTNLRLIE-------S 633
P+++ +S T R SS + + + + R N++ + R+ S
Sbjct: 905 STPRKARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGAS 964
Query: 634 LFTIQKMIMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVH 693
I D +KQEG +T+ KK+ L L++ L L +K +
Sbjct: 965 SSKESSRISDGKKQEGPATQVSKKNPASL--PLTQAALKVL---------AQKASEAQPP 1013
Query: 694 PSMDQNDPLVRSAIEQVRFRISNSSTANRVKTSQPPVPQ-GEAEEDSQGKEGPSGSGDSQ 752
+ Q V SA+ + S++ T++ P+ E ++ ++ E S DS
Sbjct: 1014 VARTQPSSGVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSS 1073
Query: 753 LSASSRSESGR----MKKSDNKMGITPLR 777
S+S E G K + +G TP R
Sbjct: 1074 DSSSGSEEDGEGPQGAKSAHTLVGPTPSR 1102
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 364
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 365 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 423
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 424 PAQAKPSGKAPQVRAASAPAKESPRKGAA 452
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 345 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 404
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 405 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 463
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 464 AQVQVGKQEEDSRSSSEESDSDREALA 490
Score = 36.2 bits (82), Expect = 0.35
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 40/189 (21%)
Query: 1839 GSSSEDSPPEGQAPPSHSPRGT--KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPS 1896
GS + P+G A +H+ G R + E +E + P++ +L + P
Sbjct: 1117 GSEEDGEGPQG-AKSAHTLVGPTPSRTETLVEETAAESSEDDVVAPSQ--SLLSGYMTPG 1173
Query: 1897 LGPGAEDGAEAQAPSPPPALEDTAAAG---AAQEDQEGVGEFS--------SP---GQEQ 1942
L P A +QA P L+ + + AA++D +G E SP G+E
Sbjct: 1174 LTP-----ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEA 1228
Query: 1943 LSGQA-----QPPEGSEDPRGFTESFGAANISQAARERDCESVCFIGRPWRVVDGHLNLP 1997
SG +P +G+ +P+ T + +NI+Q C +G+PW + + +
Sbjct: 1229 ASGTTPQKSRKPKKGAGNPQASTLAL-QSNITQ----------CLLGQPWPLNEAQVQAS 1277
Query: 1998 VCKGMMEAM 2006
V K + E +
Sbjct: 1278 VVKVLTELL 1286
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 833 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 892
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 893 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 944
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 364
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 365 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 423
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 424 PAQAKPSGKAPQVRAASAPAKESPRKGAA 452
Score = 37.0 bits (84), Expect = 0.20
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 1839 GSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQM-TPAKRPALQDSNLAPSL 1897
GS + P+G A +H+ T R E ET AE ++ A +L + P L
Sbjct: 1155 GSEEDGEGPQG-AKSAHTLGPTPSRTETLVE--ETAAESSEDDVVAPSQSLLSGYMTPGL 1211
Query: 1898 GPGAEDGAEAQAPSPPPALEDTAAAG---AAQEDQEGVGEFS--------SP---GQEQL 1943
P A +QA P L+ + + AA++D +G E SP G+E
Sbjct: 1212 TP-----ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAA 1266
Query: 1944 SGQA-----QPPEGSEDPRGFTESFGAANISQAARERDCESVCFIGRPWRVVDGHLNLPV 1998
SG +P +G+ +P+ T + +NI+Q C +G+PW + + + V
Sbjct: 1267 SGTTPQKSRKPKKGAGNPQASTLAL-QSNITQ----------CLLGQPWPLNEAQVQASV 1315
Query: 1999 CKGMMEAM 2006
K + E +
Sbjct: 1316 VKVLTELL 1323
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 345 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 404
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 405 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 463
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 464 AQVQVGKQEEDSRSSSEESDSDREALA 490
Score = 34.3 bits (77), Expect = 1.3
Identities = 67/328 (20%), Positives = 118/328 (35%), Gaps = 46/328 (14%)
Query: 482 EERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAEE 541
EE S S S+++ A ++P + H + P K P+ PG
Sbjct: 865 EEDSGSSEEESDSEEEAETLAQVKPSGKTHQ---IRAALAPAKESPRKGAAPTPPGKTGP 921
Query: 542 RACQSLASRDS---------------LLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRM 586
A Q+ DS + ++ V +P + FV +
Sbjct: 922 SAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAA 981
Query: 587 ENPKESSSSLKTGRHSSGQDKPHETYRLLK------RRNLIIEAVTNLRLIE-------S 633
P+++ +S T R SS + + + + R N++ + R+ S
Sbjct: 982 STPRKARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGAS 1041
Query: 634 LFTIQKMIMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVH 693
I D +KQEG +T+ KK+ L L++ L L +K +
Sbjct: 1042 SSKESSRISDGKKQEGPATQVSKKNPASL--PLTQAALKVL---------AQKASEAQPP 1090
Query: 694 PSMDQNDPLVRSAIEQVRFRISNSSTANRVKTSQPPVPQ-GEAEEDSQGKEGPSGSGDSQ 752
+ Q V SA+ + S++ T++ P+ E ++ ++ E S DS
Sbjct: 1091 VARTQPSSGVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSS 1150
Query: 753 LSASSRSESG---RMKKSDNKMGITPLR 777
S+S E G + KS + +G TP R
Sbjct: 1151 DSSSGSEEDGEGPQGAKSAHTLGPTPSR 1178
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 833 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 892
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 893 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 944
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 230 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 287
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 288 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 346
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 347 PAQAKPSGKAPQVRAASAPAKESPRKGAA 375
Score = 37.0 bits (84), Expect = 0.20
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 1839 GSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQM-TPAKRPALQDSNLAPSL 1897
GS + P+G A +H+ T R E ET AE ++ A +L + P L
Sbjct: 1078 GSEEDGEGPQG-AKSAHTLGPTPSRTETLVE--ETAAESSEDDVVAPSQSLLSGYMTPGL 1134
Query: 1898 GPGAEDGAEAQAPSPPPALEDTAAAG---AAQEDQEGVGEFS--------SP---GQEQL 1943
P A +QA P L+ + + AA++D +G E SP G+E
Sbjct: 1135 TP-----ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAA 1189
Query: 1944 SGQA-----QPPEGSEDPRGFTESFGAANISQAARERDCESVCFIGRPWRVVDGHLNLPV 1998
SG +P +G+ +P+ T + +NI+Q C +G+PW + + + V
Sbjct: 1190 SGTTPQKSRKPKKGAGNPQASTLAL-QSNITQ----------CLLGQPWPLNEAQVQASV 1238
Query: 1999 CKGMMEAM 2006
K + E +
Sbjct: 1239 VKVLTELL 1246
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 268 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 327
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 328 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 386
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 387 AQVQVGKQEEDSRSSSEESDSDREALA 413
Score = 34.3 bits (77), Expect = 1.3
Identities = 67/328 (20%), Positives = 118/328 (35%), Gaps = 46/328 (14%)
Query: 482 EERSSSKRRGRGSQKDTRASANLRPKTQPHHSTPTKGGWKVVNLHPLKKQPPSFPGAAEE 541
EE S S S+++ A ++P + H + P K P+ PG
Sbjct: 788 EEDSGSSEEESDSEEEAETLAQVKPSGKTHQ---IRAALAPAKESPRKGAAPTPPGKTGP 844
Query: 542 RACQSLASRDS---------------LLDTSSVSEPNVSFVSHCADSNSGDIAVIEEVRM 586
A Q+ DS + ++ V +P + FV +
Sbjct: 845 SAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQAQAA 904
Query: 587 ENPKESSSSLKTGRHSSGQDKPHETYRLLK------RRNLIIEAVTNLRLIE-------S 633
P+++ +S T R SS + + + + R N++ + R+ S
Sbjct: 905 STPRKARASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGAS 964
Query: 634 LFTIQKMIMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVH 693
I D +KQEG +T+ KK+ L L++ L L +K +
Sbjct: 965 SSKESSRISDGKKQEGPATQVSKKNPASL--PLTQAALKVL---------AQKASEAQPP 1013
Query: 694 PSMDQNDPLVRSAIEQVRFRISNSSTANRVKTSQPPVPQ-GEAEEDSQGKEGPSGSGDSQ 752
+ Q V SA+ + S++ T++ P+ E ++ ++ E S DS
Sbjct: 1014 VARTQPSSGVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESSDDSEDSS 1073
Query: 753 LSASSRSESG---RMKKSDNKMGITPLR 777
S+S E G + KS + +G TP R
Sbjct: 1074 DSSSGSEEDGEGPQGAKSAHTLGPTPSR 1101
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 756 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 815
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 816 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 867
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 364
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 365 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 423
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 424 PAQAKPSGKAPQVRAASAPAKESPRKGAA 452
Score = 37.0 bits (84), Expect = 0.20
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 39/188 (20%)
Query: 1839 GSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQM-TPAKRPALQDSNLAPSL 1897
GS + P+G A +H+ T R E ET AE ++ A +L + P L
Sbjct: 1117 GSEEDGEGPQG-AKSAHTLGPTPSRTETLVE--ETAAESSEDDVVAPSQSLLSGYMTPGL 1173
Query: 1898 GPGAEDGAEAQAPSPPPALEDTAAAG---AAQEDQEGVGEFS--------SP---GQEQL 1943
P A +QA P L+ + + AA++D +G E SP G+E
Sbjct: 1174 TP-----ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAA 1228
Query: 1944 SGQA-----QPPEGSEDPRGFTESFGAANISQAARERDCESVCFIGRPWRVVDGHLNLPV 1998
SG +P +G+ +P+ T + +NI+Q C +G+PW + + + V
Sbjct: 1229 SGTTPQKSRKPKKGAGNPQASTLAL-QSNITQ----------CLLGQPWPLNEAQVQASV 1277
Query: 1999 CKGMMEAM 2006
K + E +
Sbjct: 1278 VKVLTELL 1285
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 345 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 404
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 405 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 463
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 464 AQVQVGKQEEDSRSSSEESDSDREALA 490
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 833 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 892
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 893 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 944
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c [Homo
sapiens]
Length = 958
Score = 39.3 bits (90), Expect = 0.041
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 1834 ARPLEGSSSEDSPP-EGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQ--- 1889
A+ G + +PP + A S + G S +S +D+E + TPA + LQ
Sbjct: 307 AKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE--EETPAAKALLQAKA 364
Query: 1890 ---DSNLAPSLGPGAEDGAEAQAPSPP----PALEDTAAAGAAQED-----QEGVGEFSS 1937
S + + P E + AP+PP PA+ A AG +ED +E E +
Sbjct: 365 SGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVA-KAQAGKREEDSQSSSEESDSEEEA 423
Query: 1938 PGQEQLSGQAQPPEGSEDPRGFTESFGAA 1966
P Q + SG+A + P + GAA
Sbjct: 424 PAQAKPSGKAPQVRAASAPAKESPRKGAA 452
Score = 36.2 bits (82), Expect = 0.35
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)
Query: 1823 EDADIQREDPQARPL-----EGSSSE---------DSPPEGQAPPSHSPRGT-------- 1860
E +D + E P A+ L G +S+ +SP +G AP G
Sbjct: 345 ESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAG 404
Query: 1861 KRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTA 1920
KR S + E+D+E AK P+ + + + P E + AP+PP A
Sbjct: 405 KREEDSQSSSEESDSEEEAPAQAK-PSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAA 463
Query: 1921 A---AGAAQEDQEGVGEFSSPGQEQLS 1944
A G +ED E S +E L+
Sbjct: 464 AQVQVGKQEEDSRSSSEESDSDREALA 490
Score = 33.9 bits (76), Expect = 1.7
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAK-RPALQ 1889
+PQ + P G+A + + T S E+D+E T A+ +P+ +
Sbjct: 833 NPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGK 892
Query: 1890 DSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQE 1941
+ +L P E + AP+PP +AA Q+D E S E
Sbjct: 893 THQIRAALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGE 944
>gi|146219832 myosin light chain kinase 3 [Homo sapiens]
Length = 819
Score = 39.3 bits (90), Expect = 0.041
Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 1831 DPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQD 1890
DP + + P QA P H P TK A E G ++ PA +
Sbjct: 215 DPAQAVVSPGQGDGVPGPAQAFPGHLPLPTKVEAKAPETPSENLRTGLELAPAPG---RV 271
Query: 1891 SNLAPSL--GPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQ 1948
+ ++PSL PGA GA + P P P E T G + + SG
Sbjct: 272 NVVSPSLEVAPGAGQGASSSRPDPEPLEEGTRLTPGPGPQCPGPPGLPAQARATHSGGET 331
Query: 1949 PP 1950
PP
Sbjct: 332 PP 333
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 38.9 bits (89), Expect = 0.054
Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 22/181 (12%)
Query: 1815 HSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPS------HSPRGTKRRASWAS 1868
H+ R + R + I+ ++ G+S S G+A PS T+ S +
Sbjct: 1293 HNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPSSEGDSCDGVEATEGPGSADT 1352
Query: 1869 ENGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDG---------AEAQAPSPPPALEDT 1919
E ++ E + RPA + + PS PG +D E P P PA
Sbjct: 1353 EEPKSQGE-AEREEVPRPA-EQTEPPPSGTPGPDDARDDDHEGGPVEGPGPLPSPASATA 1410
Query: 1920 AAAGAAQEDQEGVGEFSSPGQEQLSGQAQPP----EGSEDPRGFTESFGAANISQAARER 1975
AA AA ED ++PG+ + + PP S PR + + +AA R
Sbjct: 1411 TAAPAAPED-AATSAAAAPGEGPAAPSSAPPPSNSSSSSAPRRPSSLQSLFGLPEAAGAR 1469
Query: 1976 D 1976
D
Sbjct: 1470 D 1470
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 38.9 bits (89), Expect = 0.054
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASE- 1869
P H+V + + + + ED + P SS E +PP A PS SP A
Sbjct: 350 PLASHTVEIHE-PNGMVPSEDLE--PEVESSPELAPPP--ACPSESPVPIAPTAQPEELL 404
Query: 1870 NGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAE-AQAPSPPPALEDTAAAGAAQED 1928
NG ++P P Q + S+ P A A APS ++ +E+
Sbjct: 405 NGAPSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEE 464
Query: 1929 QEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAA 1972
+ GE E+ + PPE + P +++ AA +Q A
Sbjct: 465 EGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVA 508
>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
isoform 2 [Homo sapiens]
Length = 1512
Score = 38.9 bits (89), Expect = 0.054
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASE- 1869
P H+V + + + + ED + P SS E +PP A PS SP A
Sbjct: 263 PLASHTVEIHE-PNGMVPSEDLE--PEVESSPELAPPP--ACPSESPVPIAPTAQPEELL 317
Query: 1870 NGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAE-AQAPSPPPALEDTAAAGAAQED 1928
NG ++P P Q + S+ P A A APS ++ +E+
Sbjct: 318 NGAPSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEE 377
Query: 1929 QEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAA 1972
+ GE E+ + PPE + P +++ AA +Q A
Sbjct: 378 EGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVA 421
>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
isoform 3 [Homo sapiens]
Length = 1435
Score = 38.9 bits (89), Expect = 0.054
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASE- 1869
P H+V + + + + ED + P SS E +PP A PS SP A
Sbjct: 186 PLASHTVEIHE-PNGMVPSEDLE--PEVESSPELAPPP--ACPSESPVPIAPTAQPEELL 240
Query: 1870 NGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAE-AQAPSPPPALEDTAAAGAAQED 1928
NG ++P P Q + S+ P A A APS ++ +E+
Sbjct: 241 NGAPSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEE 300
Query: 1929 QEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAA 1972
+ GE E+ + PPE + P +++ AA +Q A
Sbjct: 301 EGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVA 344
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 38.9 bits (89), Expect = 0.054
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASE- 1869
P H+V + + + + ED + P SS E +PP A PS SP A
Sbjct: 350 PLASHTVEIHE-PNGMVPSEDLE--PEVESSPELAPPP--ACPSESPVPIAPTAQPEELL 404
Query: 1870 NGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAE-AQAPSPPPALEDTAAAGAAQED 1928
NG ++P P Q + S+ P A A APS ++ +E+
Sbjct: 405 NGAPSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEE 464
Query: 1929 QEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAA 1972
+ GE E+ + PPE + P +++ AA +Q A
Sbjct: 465 EGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVA 508
>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
isoform 4 [Homo sapiens]
Length = 1403
Score = 38.9 bits (89), Expect = 0.054
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 1811 PWLLHSVRLKDREDADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASE- 1869
P H+V + + + + ED + P SS E +PP A PS SP A
Sbjct: 154 PLASHTVEIHE-PNGMVPSEDLE--PEVESSPELAPPP--ACPSESPVPIAPTAQPEELL 208
Query: 1870 NGETDAEGTQMTPAKRPALQDSNLAPSLGPGAEDGAE-AQAPSPPPALEDTAAAGAAQED 1928
NG ++P P Q + S+ P A A APS ++ +E+
Sbjct: 209 NGAPSPPAVDLSPVSEPEEQAKEVTASMAPPTIPSATPATAPSATSPAQEEEMEEEEEEE 268
Query: 1929 QEGVGEFSSPGQEQLSGQAQPPEGSEDPRGFTESFGAANISQAA 1972
+ GE E+ + PPE + P +++ AA +Q A
Sbjct: 269 EGEAGEAGEAESEKGGEELLPPESTPIPANLSQNLEAAAATQVA 312
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.9 bits (89), Expect = 0.054
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 18/146 (12%)
Query: 1821 DREDADIQREDPQARP-LEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQ 1879
+ E + + +A+P EG ++D+ E Q P A A E + + EG +
Sbjct: 2128 ESEGIEAPEAEGEAQPESEGVEAQDAEGEAQ------PESEGIEAQEAEEEAQPELEGVE 2181
Query: 1880 MTPAKRPALQDSN----------LAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQ 1929
A+ A +S P L AE +A P +E A G AQ +
Sbjct: 2182 APEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPES 2241
Query: 1930 EGVGEFSSPGQEQLS-GQAQPPEGSE 1954
EG + G Q+S G Q E SE
Sbjct: 2242 EGETQGEKKGSPQVSLGDGQSEEASE 2267
Score = 37.4 bits (85), Expect = 0.16
Identities = 52/210 (24%), Positives = 77/210 (36%), Gaps = 40/210 (19%)
Query: 1775 GRTRTFADCIQALLEQHQVLEVGGNTARLVAMGSAWPWLLHSVRLKDREDADIQREDPQA 1834
G + +D ++A + + E G A G A P + ED D Q + +A
Sbjct: 2046 GDAQPESDGVEAPEAEEEAQEAEGEVQE--AEGEAHP---------ESEDVDAQEAEGEA 2094
Query: 1835 RPLEGSSSEDSPPEGQAPPSHS-----------PRGTKRRASWASENGETDAEGTQMTPA 1883
+P E E EG+A + P A A + ++EG + A
Sbjct: 2095 QP-ESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDA 2153
Query: 1884 KRPALQDSN----------LAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVG 1933
+ A +S P L AE +A +E A G AQ + EGV
Sbjct: 2154 EGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGV- 2212
Query: 1934 EFSSPGQEQLSGQAQP-PEGSEDPRGFTES 1962
+P E+ +AQP PEG E P E+
Sbjct: 2213 --EAPEAEE---EAQPEPEGVETPEAEGEA 2237
Score = 36.2 bits (82), Expect = 0.35
Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 27/163 (16%)
Query: 1805 AMGSAWPWLLHSVRLKDREDAD-IQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRR 1863
A G P L + + ED + QR + P G + D+ + + +H+
Sbjct: 1726 AEGGLGPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSE----- 1780
Query: 1864 ASWASENGETDAEGTQMTPAKRPALQDSNLAPSL----------GPGAEDGAEAQAPSPP 1913
S SE GE + EG ++ Q S +L PG DGAE
Sbjct: 1781 TSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEG------ 1834
Query: 1914 PALEDTAAAGAAQEDQEGVGEFSSPGQ-EQLSGQAQPPEGSED 1955
+E A G AQ + EGV + G ++ G+AQP SED
Sbjct: 1835 --IEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPE--SED 1873
Score = 32.7 bits (73), Expect = 3.9
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 17/139 (12%)
Query: 1824 DADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPA 1883
+A + ED +A EG E E +A P G + + E + TQ T
Sbjct: 1992 EAQPESEDVEAPEAEGEMQE---AEEEAQPESD--GVEAQPKSEGEEAQEVEGETQKTEG 2046
Query: 1884 KRPALQDSNLAPSLGPGAEDG------AEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSS 1937
D AP A++ AE +A ++ A G AQ + EGV +
Sbjct: 2047 DAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGV---EA 2103
Query: 1938 PGQEQLSGQAQPPEGSEDP 1956
P E G+AQ EG E P
Sbjct: 2104 PEAE---GEAQKAEGIEAP 2119
Score = 32.3 bits (72), Expect = 5.0
Identities = 37/169 (21%), Positives = 56/169 (33%), Gaps = 27/169 (15%)
Query: 1841 SSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDSNLAPSLGPG 1900
SS SP G+ P PR + R S + + P +R A QD ++ G
Sbjct: 649 SSPSSPGLGRVAPRGHPRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSS 708
Query: 1901 AEDGAEAQAPSPP--------------------PALEDTAAAGAAQEDQEGVGEFSSPGQ 1940
+ +A P PA+ +G + + G G
Sbjct: 709 SSTRTQASGNLRPPSSGSLPSQDLLGTSSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGS 768
Query: 1941 EQLSGQAQPPEGSEDPRGFTESFGAANISQAARERDCES---VCFIGRP 1986
S PP S+ GAA++ + AR+ S V +GRP
Sbjct: 769 RTCSPAPIPPHTSDS----CSKSGAASLGEEARDTPQPSSPLVLQVGRP 813
Score = 32.0 bits (71), Expect = 6.6
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 6/131 (4%)
Query: 1824 DADIQREDPQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPA 1883
+ D Q + +A+P E E EG+A P T A W + ++EG + A
Sbjct: 1857 EGDAQEAEGEAQP-ESEDVEAPEAEGEAQPESEDVETPE-AEWEVQ---PESEGAEAPEA 1911
Query: 1884 KRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQL 1943
++ A ++ +L ED E++ A E+ A Q E S +E+
Sbjct: 1912 EKEAQPETESVEALETEGEDEPESEGAEAQEA-EEAAQEAEGQTQPESEVIESQEAEEEA 1970
Query: 1944 SGQAQPPEGSE 1954
+++ E E
Sbjct: 1971 QPESEDVEALE 1981
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.9 bits (89), Expect = 0.054
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 6/129 (4%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G PP P P+G K R +S++ +G +P
Sbjct: 179 PQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSR---SSQSPPGKPQGPPPQGGNQPQGPPP 235
Query: 1892 NLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGA--AQEDQEGVGEFSSPGQEQLSG-QAQ 1948
GP + G + Q P PP + A G +Q + G+ P Q++ + Q
Sbjct: 236 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP 295
Query: 1949 PPEGSEDPR 1957
PP +P+
Sbjct: 296 PPPAGGNPQ 304
Score = 38.1 bits (87), Expect = 0.092
Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 28/135 (20%)
Query: 1832 PQARPLEGSSSEDSPP---EGQAPP-----SHSPRGTKRRASWASENGETDAEGTQMTPA 1883
PQ P +G + PP + Q PP S SPR + G +G P
Sbjct: 57 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPG 116
Query: 1884 KRPALQDSNLAPSLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQL 1943
K GP + G Q P PP + G + + S PG+
Sbjct: 117 K-----------PQGPPPQGGNRPQGPPPPGKPQ-----GPPPQGDKSRSPRSPPGKP-- 158
Query: 1944 SGQAQPPEGSEDPRG 1958
Q PP+G P+G
Sbjct: 159 --QGPPPQGGNQPQG 171
Score = 36.6 bits (83), Expect = 0.27
Identities = 34/129 (26%), Positives = 47/129 (36%), Gaps = 22/129 (17%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP PP P+G + G Q PA+ + S
Sbjct: 219 PQGPPPQGGNQPQGPP----PPPGKPQGPPPQGG-NKPQGPPPPGKPQGPPAQGGSKSQS 273
Query: 1892 NLAP---SLGPGAEDGAEAQAPSPPPALEDTAAAGAAQEDQEGVGEFSSPGQEQLSGQAQ 1948
+P GP ++G Q P PP A G Q+ Q +P Q G +
Sbjct: 274 ARSPPGKPQGPPQQEGNNPQGPPPP-------AGGNPQQPQ-------APPAGQPQGPPR 319
Query: 1949 PPEGSEDPR 1957
PP+G R
Sbjct: 320 PPQGGRPSR 328
Score = 34.3 bits (77), Expect = 1.3
Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 15/139 (10%)
Query: 1832 PQARPLEGSSSEDSPPEGQAPPSHSPRGTKRRASWASENGETDAEGTQMTPAKRPALQDS 1891
PQ P +G + PP P P R G+ Q ++ P S
Sbjct: 97 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPR---S 153
Query: 1892 NLAPSLGPGAEDGAEAQAPSPPPALED--TAAAGAAQEDQEGVGEFSSP---GQEQLSGQ 1946
GP + G + Q P PPP G + G+ P G + S Q
Sbjct: 154 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQ 213
Query: 1947 A-------QPPEGSEDPRG 1958
+ PP+G P+G
Sbjct: 214 SPPGKPQGPPPQGGNQPQG 232
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,043,295
Number of Sequences: 37866
Number of extensions: 4118441
Number of successful extensions: 20800
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 19667
Number of HSP's gapped (non-prelim): 1526
length of query: 2109
length of database: 18,247,518
effective HSP length: 118
effective length of query: 1991
effective length of database: 13,779,330
effective search space: 27434646030
effective search space used: 27434646030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.