Guide to the Human Genome
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Search of human proteins with 10190702

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10190702 MRS2-like, magnesium homeostasis factor [Homo
sapiens]
         (443 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens]    865   0.0  
gi|167614504 laminin, beta 1 precursor [Homo sapiens]                  33   0.40 
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    33   0.40 
gi|224586823 coiled-coil domain containing 110 isoform b [Homo s...    33   0.40 
gi|22749515 coiled-coil domain containing 110 isoform a [Homo sa...    33   0.40 
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    33   0.52 
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    33   0.52 
gi|18641360 collectin sub-family member 12 [Homo sapiens]              31   2.0  
gi|217416372 coiled-coil domain containing 142 [Homo sapiens]          31   2.0  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    31   2.6  
gi|110347568 centrosomal protein 152kDa [Homo sapiens]                 31   2.6  
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa...    31   2.6  
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    30   3.4  
gi|156104908 myosin heavy chain 6 [Homo sapiens]                       30   3.4  
gi|148762985 pseudouridylate synthase 7 homolog (S. cerevisiae)-...    30   3.4  
gi|148762948 pseudouridylate synthase 7 homolog (S. cerevisiae)-...    30   3.4  
gi|148762961 pseudouridylate synthase 7 homolog (S. cerevisiae)-...    30   3.4  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    30   4.4  
gi|29648315 small G protein signaling modulator 3 [Homo sapiens]       30   4.4  
gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens]     30   4.4  
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   30   4.4  
gi|169178850 PREDICTED: similar to coiled-coil domain containing...    30   5.7  
gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ...    30   5.7  
gi|221316624 dystonin isoform 4 [Homo sapiens]                         30   5.7  
gi|221316622 dystonin isoform 3 [Homo sapiens]                         30   5.7  
gi|221316618 dystonin isoform 2 [Homo sapiens]                         30   5.7  
gi|34577047 dystonin isoform 1 [Homo sapiens]                          30   5.7  
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              30   5.7  
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    30   5.7  
gi|189217904 RPGRIP1-like isoform b [Homo sapiens]                     29   7.5  

>gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens]
          Length = 443

 Score =  865 bits (2236), Expect = 0.0
 Identities = 443/443 (100%), Positives = 443/443 (100%)

Query: 1   MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANLIGRSRAAQLCGPDRL 60
           MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANLIGRSRAAQLCGPDRL
Sbjct: 1   MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANLIGRSRAAQLCGPDRL 60

Query: 61  RVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQGNVTSFERKKTELYQELGLQARDLRF 120
           RVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQGNVTSFERKKTELYQELGLQARDLRF
Sbjct: 61  RVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQGNVTSFERKKTELYQELGLQARDLRF 120

Query: 121 QHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTY 180
           QHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTY
Sbjct: 121 QHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTY 180

Query: 181 PLPFEFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS 240
           PLPFEFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS
Sbjct: 181 PLPFEFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS 240

Query: 241 LSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYY 300
           LSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYY
Sbjct: 241 LSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYY 300

Query: 301 RLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMGVAFG 360
           RLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMGVAFG
Sbjct: 301 RLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMGVAFG 360

Query: 361 MNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQLEAPLPPMMASLPKKTLLADR 420
           MNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQLEAPLPPMMASLPKKTLLADR
Sbjct: 361 MNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQLEAPLPPMMASLPKKTLLADR 420

Query: 421 SMELKNSLRLDGLGSGRSILTNR 443
           SMELKNSLRLDGLGSGRSILTNR
Sbjct: 421 SMELKNSLRLDGLGSGRSILTNR 443


>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
          Length = 1786

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 14/42 (33%), Positives = 26/42 (61%)

Query: 222  KHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEE 263
            +HS+ D ++  +LL+  K  S+  TD+K+  + + E L+E E
Sbjct: 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAE 1603


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPL--ILETLDALVDPK 222
            + L  +LSG  + +   L  E +A++   Q  ++ LQ +   +  L      L+  V+  
Sbjct: 977  KNLTEELSGLDETIA-KLTREKKALQEAHQQALDDLQAEEDKVNSLNKTKSKLEQQVEDL 1035

Query: 223  HSSVDRSK-LHILLQNGKSLSELETDIKIFKESILEILDEEELLEE 267
             SS+++ K L + L+  K   +LE D+K+ +ESIL++ ++++ L+E
Sbjct: 1036 ESSLEQEKKLRVDLERNKR--KLEGDLKLAQESILDLENDKQQLDE 1079


>gi|224586823 coiled-coil domain containing 110 isoform b [Homo
           sapiens]
          Length = 796

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 41/241 (17%)

Query: 94  QGNVTSFERKKTELYQELG--------LQARDLRFQHVMSITVR-NNRIIMRMEYLKAVI 144
           QG   + E K  +L  E          L++++ + Q  M+I    NNR+ + ME +K  I
Sbjct: 482 QGQNKTLEEKNIQLSLEKQQMMEALDQLKSKEHKTQSDMAIVNNENNRMSIEMEAMKTNI 541

Query: 145 TPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPF-EFRAIEALLQYWINTLQGK 203
               LLI D + + LE+   + L  + S   +L    L   + +  E L +    TL   
Sbjct: 542 ----LLIQDEKEM-LEKKTHQLLKEKSSLGNELKESQLEIIQLKEKERLAKTEQETL--- 593

Query: 204 LSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS------------LSELETDIKIF 251
           L I++ +  E L+     + S+  R  +   ++N ++            +   +++  I+
Sbjct: 594 LQIIETVKDEKLNLETTLQESTAARQIMEREIENIQTYQSTAEENFLQEIKNAKSEASIY 653

Query: 252 KESILEILDEEELLEELCVSKWSDPQVFE-----------KSSAGIDHAEEMELLLENYY 300
           K S+ EI  E E+L ++ +   +D Q+ +           K    I    E ++LLENY 
Sbjct: 654 KNSLSEIGKECEMLSKMVMETKTDNQILKEELKKHSQENIKFENSISRLTEDKILLENYV 713

Query: 301 R 301
           R
Sbjct: 714 R 714



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 214 TLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKW 273
           TL  L   KH   D+ +   L++ G  +SE E   K+   +   +   + L   L  S  
Sbjct: 344 TLSFLDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQYLQNYLKESVQ 403

Query: 274 SDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSI 323
              +V E  S  ++   +M+ L+     L   +    ++L+ L+++  +I
Sbjct: 404 IQKKVMELESENLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEKSTI 453


>gi|22749515 coiled-coil domain containing 110 isoform a [Homo
           sapiens]
          Length = 833

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 41/241 (17%)

Query: 94  QGNVTSFERKKTELYQELG--------LQARDLRFQHVMSITVR-NNRIIMRMEYLKAVI 144
           QG   + E K  +L  E          L++++ + Q  M+I    NNR+ + ME +K  I
Sbjct: 519 QGQNKTLEEKNIQLSLEKQQMMEALDQLKSKEHKTQSDMAIVNNENNRMSIEMEAMKTNI 578

Query: 145 TPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPF-EFRAIEALLQYWINTLQGK 203
               LLI D + + LE+   + L  + S   +L    L   + +  E L +    TL   
Sbjct: 579 ----LLIQDEKEM-LEKKTHQLLKEKSSLGNELKESQLEIIQLKEKERLAKTEQETL--- 630

Query: 204 LSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS------------LSELETDIKIF 251
           L I++ +  E L+     + S+  R  +   ++N ++            +   +++  I+
Sbjct: 631 LQIIETVKDEKLNLETTLQESTAARQIMEREIENIQTYQSTAEENFLQEIKNAKSEASIY 690

Query: 252 KESILEILDEEELLEELCVSKWSDPQVFE-----------KSSAGIDHAEEMELLLENYY 300
           K S+ EI  E E+L ++ +   +D Q+ +           K    I    E ++LLENY 
Sbjct: 691 KNSLSEIGKECEMLSKMVMETKTDNQILKEELKKHSQENIKFENSISRLTEDKILLENYV 750

Query: 301 R 301
           R
Sbjct: 751 R 751



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/110 (21%), Positives = 47/110 (42%)

Query: 214 TLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKW 273
           TL  L   KH   D+ +   L++ G  +SE E   K+   +   +   + L   L  S  
Sbjct: 381 TLSFLDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQYLQNYLKESVQ 440

Query: 274 SDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSI 323
              +V E  S  ++   +M+ L+     L   +    ++L+ L+++  +I
Sbjct: 441 IQKKVMELESENLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEKSTI 490


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 19/163 (11%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQG---KLSILQPLILETLDALVDP 221
            + L  +++G  + +   L  E +A++   Q  ++ LQ    K++ L    ++    + D 
Sbjct: 982  KNLTEEMAGLDETIA-KLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDL 1040

Query: 222  KHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEK 281
            + S     KL + L+  K   +LE D+K+ +ESI++I +E++ L+E    K      FE 
Sbjct: 1041 EGSLEQEKKLRMDLERAKR--KLEGDLKLAQESIMDIENEKQQLDEKLKKK-----EFEI 1093

Query: 282  SSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSII 324
            S+        ++  +E+   L   L    +EL+  I++ +  I
Sbjct: 1094 SN--------LQSKIEDEQALGIQLQKKIKELQARIEELEEEI 1128


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
            sapiens]
          Length = 1941

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 19/163 (11%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQG---KLSILQPLILETLDALVDP 221
            + L  +++G  + +   L  E +A++   Q  ++ LQ    K++ L    ++    + D 
Sbjct: 982  KNLTEEMAGLDETIA-KLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDL 1040

Query: 222  KHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEK 281
            + S     KL + L+  K   +LE D+K+ +ESI++I +E++ L+E    K      FE 
Sbjct: 1041 EGSLEQEKKLRMDLERAKR--KLEGDLKLAQESIMDIENEKQQLDEKLKKK-----EFEI 1093

Query: 282  SSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSII 324
            S+        ++  +E+   L   L    +EL+  I++ +  I
Sbjct: 1094 SN--------LQSKIEDEQALGIQLQKKIKELQARIEELEEEI 1128


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 9/141 (6%)

Query: 212 LETLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDE-EELLEELCV 270
           +ET     D K ++V+     +  Q GK      +++  F+  IL++  +  E+ E+   
Sbjct: 72  METSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQLREITEKTSK 131

Query: 271 SKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQ---SIIFIN 327
           +K +  ++     A +D   +++  LEN   L   ++   +     + + Q   S++  N
Sbjct: 132 NKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGN 191

Query: 328 LD----SHRNVMMRL-NLQLT 343
           L     SH  V+M L NL LT
Sbjct: 192 LQNQMYSHNVVIMNLNNLNLT 212


>gi|217416372 coiled-coil domain containing 142 [Homo sapiens]
          Length = 743

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 199 TLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEI 258
           T  G   +LQ L    LDAL +P        +L  +      L  L+T +  F     + 
Sbjct: 387 TSSGTAELLQQLFPPLLDALREP--------RLRRIFCQPAGLCTLQTTLLWFLGRAQQY 438

Query: 259 LDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLID 318
           L   +    L + +   P +  ++ A    A E  L LE   +L  ++     ++++L +
Sbjct: 439 LAAWDPASFLLLIQKDLPPLLHEAEALYSLASEESLALEVEQQLGLEIQKLTAQIQLLPE 498

Query: 319 DSQSIIFINLDSHRNVMMRLNLQLTMGTF 347
           +S S+   + + H+  M    L +  G +
Sbjct: 499 ESLSV--FSQECHKQAMQGFKLYMPRGRY 525


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 199  TLQGKLSILQPLILETLDALVDPKHSSVDRSKL-HILLQNGKSLSELETD-IKIFKESIL 256
            T QG    LQ  +L T+     P H    RSKL   +  +  +L ELE   + + ++++ 
Sbjct: 3413 TFQG----LQDQLLSTVVTHEVP-HLEDQRSKLLESISLDAITLEELEEKTLNLLQKALG 3467

Query: 257  EILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLA 303
             ILD++++++ L  SK +  ++ ++  A      E++ + +NY  +A
Sbjct: 3468 SILDDDKIVDTLRKSKMTSNEISKRIEATKKAESEIQAIRKNYLPIA 3514


>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
          Length = 1654

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 22/92 (23%)

Query: 226  VDRSKLHILLQNGKSLSELETDIKIFKESILEIL---------------DEEELLEEL-- 268
            +D+S+    +Q  K    ++ +I  ++E IL +L               ++++LLE +  
Sbjct: 1020 LDQSRREWTMQEAK---RIQLEIYQYEEDILTVLGVLLSDTQKEHISDSEDKQLLEIMST 1076

Query: 269  CVSKWSDPQVFEKSSAGIDHA--EEMELLLEN 298
            C SKW   Q FEK    I  A  + + LL+EN
Sbjct: 1077 CSSKWMSVQYFEKLKGCIQKAFQDTLPLLVEN 1108


>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
           sapiens]
          Length = 641

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 36/276 (13%)

Query: 97  VTSFERKKTELYQELGLQARDL-RFQHVMSITVRNNRIIM-----RMEYLKAVITPECLL 150
           V S E+  T+L +EL +   ++ + Q         N++I+      +E  K  +  E L 
Sbjct: 262 VDSLEKSNTKLIEELAIAKNNIIKLQEENHQLRSENKLILMKTQQHLEVTKVDVETE-LQ 320

Query: 151 ILDYRNLNLEQWLFRELPSQLSGEGQL---------VTYPLPFEFRAIEALLQYWINT-- 199
              +    L++ ++ E   QL  E QL         V   +  E      LL+  I+   
Sbjct: 321 TYKHSRQGLDE-MYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEKDIHEKQ 379

Query: 200 -----LQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKS-----LSELETDIK 249
                L+ +L  ++ + +E    L   +    +++++   L+   +     + +LE  ++
Sbjct: 380 DTLIGLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAAMRQLEQRLQ 439

Query: 250 IFKESILEILDEEELLEELCVSKWS--DPQVFEKSSAGIDHAEEMELLLENYYRLADDLS 307
             +++ +E  DE+E   + C+SK      Q+ +K    +    ++++  E    L +DL 
Sbjct: 440 QAEKAQMEAEDEDEKYLQECLSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQ 499

Query: 308 NAARELRVLIDDSQSII-----FINLDSHRNVMMRL 338
                L  L +++Q II     F+NL      + ++
Sbjct: 500 KEKDALSHLRNETQQIISLKKEFLNLQDENQQLKKI 535


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/105 (21%), Positives = 57/105 (54%), Gaps = 4/105 (3%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPLILET--LDALVDPK 222
            + L  +++G  +++   L  E +A++   Q  ++ LQ +   +  L      L+  VD  
Sbjct: 976  KNLTEEMAGLDEIIA-KLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 1034

Query: 223  HSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEE 267
              S+++ K  + +   ++  +LE D+K+ +ESI+++ ++++ L+E
Sbjct: 1035 EGSLEQEK-KVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLDE 1078


>gi|156104908 myosin heavy chain 6 [Homo sapiens]
          Length = 1939

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPLILET--LDALVDPK 222
            + L  +++G  +++   L  E +A++   Q  ++ LQ +   +  L      L+  VD  
Sbjct: 978  KNLTEEMAGLDEIIA-KLTKEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDDL 1036

Query: 223  HSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCV----------SK 272
              S+++ K  + +   ++  +LE D+K+ +ESI+++ +++  LEE             SK
Sbjct: 1037 EGSLEQEK-KVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEFDINQQNSK 1095

Query: 273  WSDPQV--------FEKSSAGIDHAEEMELLLENYYR-----LADDLSNAARELRVLIDD 319
              D QV         +++ A I+  EE EL  E   R     L  DLS    E+   +++
Sbjct: 1096 IEDEQVLALQLQKKLKENQARIEELEE-ELEAERTARAKVEKLRSDLSRELEEISERLEE 1154

Query: 320  SQSIIFINLDSHR 332
            +     + ++ ++
Sbjct: 1155 AGGATSVQIEMNK 1167


>gi|148762985 pseudouridylate synthase 7 homolog (S.
           cerevisiae)-like [Homo sapiens]
          Length = 701

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 197 INTLQGKLSILQPLILETLDALVDPKH--SSVDRSKLHIL-LQNGKSLSELETDIKIFKE 253
           ++T Q  L++L+  +++ +   + P+     V+R+K + L  ++ K    L  + K+ + 
Sbjct: 440 VHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRER 499

Query: 254 SILEILDEEELLEELCVSKW 273
           ++LE L    + EE C+  W
Sbjct: 500 ALLEALHRFGMTEEGCIQAW 519


>gi|148762948 pseudouridylate synthase 7 homolog (S.
           cerevisiae)-like [Homo sapiens]
          Length = 701

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 197 INTLQGKLSILQPLILETLDALVDPKH--SSVDRSKLHIL-LQNGKSLSELETDIKIFKE 253
           ++T Q  L++L+  +++ +   + P+     V+R+K + L  ++ K    L  + K+ + 
Sbjct: 440 VHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRER 499

Query: 254 SILEILDEEELLEELCVSKW 273
           ++LE L    + EE C+  W
Sbjct: 500 ALLEALHRFGMTEEGCIQAW 519


>gi|148762961 pseudouridylate synthase 7 homolog (S.
           cerevisiae)-like [Homo sapiens]
          Length = 701

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 197 INTLQGKLSILQPLILETLDALVDPKH--SSVDRSKLHIL-LQNGKSLSELETDIKIFKE 253
           ++T Q  L++L+  +++ +   + P+     V+R+K + L  ++ K    L  + K+ + 
Sbjct: 440 VHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRER 499

Query: 254 SILEILDEEELLEELCVSKW 273
           ++LE L    + EE C+  W
Sbjct: 500 ALLEALHRFGMTEEGCIQAW 519


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 17/162 (10%)

Query: 165  RELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPLILET--LDALVDPK 222
            + L  +++G  + +   L  E +A++   Q  ++ LQ +   +  L      L+  VD  
Sbjct: 980  KNLTEEMAGLDETIA-KLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDL 1038

Query: 223  HSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEKS 282
              S+++ K  I +   ++  +LE D+K+ +ES ++I ++++ L+E    K      FE S
Sbjct: 1039 EGSLEQEK-KIRMDLERAKRKLEGDLKLAQESTMDIENDKQQLDEKLKKK-----EFEMS 1092

Query: 283  SAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSII 324
                     ++  +E+   L   L    +EL+  I++ +  I
Sbjct: 1093 G--------LQSKIEDEQALGMQLQKKIKELQARIEELEEEI 1126


>gi|29648315 small G protein signaling modulator 3 [Homo sapiens]
          Length = 749

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 32/230 (13%)

Query: 155 RNLNLEQWLFRELPSQLSGEGQLVTYPLPF-----EFRAIEALLQ------YWINTLQGK 203
           R L    WL+ E+     G G +    L F      F  + A+++      Y+  TL G 
Sbjct: 186 RVLRALAWLYPEI-GYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASYFSTTLLGV 244

Query: 204 LS---ILQPLILE---TLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILE 257
            +   +L+ LI++    LD L+      +    LH  L    S+ +++  ++I+     E
Sbjct: 245 QTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLRIWDLFFYE 304

Query: 258 --------ILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNA 309
                    L    L EE  +   +   +F   S      E+ ELLL    RLA  L++ 
Sbjct: 305 GSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMRLAGSLTDV 364

Query: 310 A------RELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFG 353
           A      + L  LI D   ++     ++ + ++R   Q    T +  LFG
Sbjct: 365 AVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALLFG 414


>gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens]
          Length = 428

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 17/115 (14%)

Query: 204 LSILQPLILETLDALVDPKHSSVDRSKLH------ILLQNGKSLSELETDIKIFKESILE 257
           LS L    L+TL  +   + S +D  K H      ++  N KSLS L+ D     +  L+
Sbjct: 131 LSQLVNCSLKTLGLISTARPSFMDLPKSHFISALTVVFVNSKSLSSLKIDDTPVDDPSLK 190

Query: 258 IL--DEEELLEELCVSKWSDPQVFEKSSAGI----DHAEEMELLLENYYRLADDL 306
           +L  +  + L+ L +S  S P V   S AGI    D    +  L  NY+ L+D+L
Sbjct: 191 VLVANNSDTLKLLKMS--SCPHV---SPAGILCVADQCHGLRELALNYHLLSDEL 240


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 59/290 (20%), Positives = 120/290 (41%), Gaps = 35/290 (12%)

Query: 75  SQATLASVAPVFTVTKFDKQGNVTSFERKKTELYQELGLQARDLRFQHVMSITVRNNRII 134
           S   L + +P   V K    G+ T F++K  +              Q + S+  + N++ 
Sbjct: 189 SHPGLLNYSPYENVCKIS--GSSTDFQKKPRDKMFSSSAPVD----QEIKSLREKLNKLR 242

Query: 135 MRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQL-SGEGQLVTYPLPFE----FRAI 189
            +   L   +T    L+  + +++ E    R   S L S + Q  + P+  E      A 
Sbjct: 243 QQNACL---VTQNHSLMTKFESIHFELTQSRAKVSMLESAQQQAASVPILEEQIINLEAE 299

Query: 190 EALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQN--GK-------- 239
            +     +   + KL   Q +++E   +L + K   + + K+ +L Q   GK        
Sbjct: 300 VSAQDKVLREAENKLEQSQKMVIEKEQSLQESKEECI-KLKVDLLEQTKQGKRAERQRNE 358

Query: 240 ---SLSELETDIKIFKESILEILD----EEELLEELCVSKWSDPQVFEKSSAGIDHAEEM 292
              +  EL    + +K+ + E L+    EEE+LE    +   + +  ++   G+ +  E+
Sbjct: 359 ALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEKENKRLQER-CGL-YKSEL 416

Query: 293 ELLLENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQL 342
           E+L E   +L ++ +N   +LR++     S +   L   R  +++L  +L
Sbjct: 417 EILKEKLRQLKEENNNGKEKLRIMA-VKNSEVMAQLTESRQSILKLESEL 465


>gi|169178850 PREDICTED: similar to coiled-coil domain containing 29
           [Homo sapiens]
          Length = 197

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 248 IKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHA-EEMELLLENYYRLADDL 306
           IK  K+   +++ EEE +   CV+   D QV ++    +    +E E L EN   L +++
Sbjct: 31  IKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEI 90

Query: 307 SN 308
            N
Sbjct: 91  LN 92


>gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo
           sapiens]
          Length = 146

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 248 IKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHA-EEMELLLENYYRLADDL 306
           IK  K+   +++ EEE +   CV+   D QV ++    +    +E E L EN   L +++
Sbjct: 31  IKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEI 90

Query: 307 SN 308
            N
Sbjct: 91  LN 92


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 185  EFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQ 236
            +F+ +EA L+ W+   +  +S+L PL        +DP   +  R ++ ILLQ
Sbjct: 2572 QFQTVEAQLKQWLVEKELMVSVLGPL-------SIDPNMLNTQRQQVQILLQ 2616


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 185  EFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQ 236
            +F+ +EA L+ W+   +  +S+L PL        +DP   +  R ++ ILLQ
Sbjct: 2583 QFQTVEAQLKQWLVEKELMVSVLGPL-------SIDPNMLNTQRQQVQILLQ 2627


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 185  EFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQ 236
            +F+ +EA L+ W+   +  +S+L PL        +DP   +  R ++ ILLQ
Sbjct: 2721 QFQTVEAQLKQWLVEKELMVSVLGPL-------SIDPNMLNTQRQQVQILLQ 2765


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 185  EFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQ 236
            +F+ +EA L+ W+   +  +S+L PL        +DP   +  R ++ ILLQ
Sbjct: 2543 QFQTVEAQLKQWLVEKELMVSVLGPL-------SIDPNMLNTQRQQVQILLQ 2587


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%)

Query: 185  EFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQ 236
            +F+ +EA L+ W+   +  +S+L PL        +DP   +  R ++ ILLQ
Sbjct: 2217 QFQTVEAQLKQWLVEKELMVSVLGPL-------SIDPNMLNTQRQQVQILLQ 2261


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
           [Homo sapiens]
          Length = 1636

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 6/63 (9%)

Query: 205 SILQPLILETLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEEL 264
           S + P ++E   AL      SV    +  L+Q+ + LS + TD++   + I ++L+E+EL
Sbjct: 415 SHIPPQLMEKCAAL------SVRPDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDEL 468

Query: 265 LEE 267
           LE+
Sbjct: 469 LEQ 471


>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
          Length = 1235

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 252 KESILEILDEEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAAR 311
           KE  L+    E+ L  +   K+S+ ++ E      D  +E ELL ENY +L D   +AA 
Sbjct: 318 KEQRLKCCSLEKQLHSM---KFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAH 374

Query: 312 ELRVLIDDSQ 321
           E +  + + Q
Sbjct: 375 EEQWKLKEQQ 384


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,339,801
Number of Sequences: 37866
Number of extensions: 633303
Number of successful extensions: 1849
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1817
Number of HSP's gapped (non-prelim): 62
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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