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Search of human proteins with 10190680
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10190680 ASCL3 [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10190680 ASCL3 [Homo sapiens] 379 e-106
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 106 1e-23
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 106 1e-23
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 106 1e-23
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 96 2e-20
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens] 71 4e-13
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 67 8e-12
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 59 3e-09
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 52 4e-07
gi|23097242 nephew of atonal 3 [Homo sapiens] 52 4e-07
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 51 5e-07
gi|4507741 twist [Homo sapiens] 49 2e-06
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 49 2e-06
gi|148922889 scleraxis homolog B [Homo sapiens] 49 3e-06
gi|17981708 twist homolog 2 [Homo sapiens] 49 3e-06
gi|186972126 scleraxis homolog A [Homo sapiens] 49 3e-06
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 48 4e-06
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 47 7e-06
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 47 9e-06
gi|116517330 factor in the germline alpha [Homo sapiens] 47 1e-05
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 46 2e-05
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 46 2e-05
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 46 2e-05
gi|4885075 atonal homolog 1 [Homo sapiens] 45 3e-05
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 45 4e-05
gi|116805332 musculin [Homo sapiens] 45 4e-05
gi|38202237 transcription factor 21 [Homo sapiens] 44 8e-05
gi|38202239 transcription factor 21 [Homo sapiens] 44 8e-05
gi|4505299 myogenic factor 6 [Homo sapiens] 42 3e-04
gi|21553337 atonal homolog 7 [Homo sapiens] 42 3e-04
>gi|10190680 ASCL3 [Homo sapiens]
Length = 181
Score = 379 bits (973), Expect = e-106
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHVHPEAPVSSPYSEELPRLPFPS 60
MMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHVHPEAPVSSPYSEELPRLPFPS
Sbjct: 1 MMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHVHPEAPVSSPYSEELPRLPFPS 60
Query: 61 DSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCVNEGYAQLRHHL 120
DSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCVNEGYAQLRHHL
Sbjct: 61 DSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCVNEGYAQLRHHL 120
Query: 121 PEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKNNPGKVSSMIATTSHHADPMFRI 180
PEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKNNPGKVSSMIATTSHHADPMFRI
Sbjct: 121 PEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKNNPGKVSSMIATTSHHADPMFRI 180
Query: 181 V 181
V
Sbjct: 181 V 181
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 106 bits (264), Expect = 1e-23
Identities = 72/160 (45%), Positives = 85/160 (53%), Gaps = 33/160 (20%)
Query: 2 MDNRGNSSLPDKLPIFPDSAR----LPLTRSFYLEPM-----VTFHVHP---EAPVSSPY 49
M+N +L D+ P+ P S +P R L P V F ++P E P Y
Sbjct: 108 MNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPPAEPLGNVPFLLYPGPAEPPYYDAY 167
Query: 50 SEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCV 109
+ P +PFP G Y EY + PAF +KRNERERQRVKCV
Sbjct: 168 AGVFPYVPFPG---AFGVY------------------EYPFEPAFIQKRNERERQRVKCV 206
Query: 110 NEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
NEGYA+LR HLP EKRLSKVETLRAAI+YI YLQ LL
Sbjct: 207 NEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 106 bits (264), Expect = 1e-23
Identities = 72/160 (45%), Positives = 85/160 (53%), Gaps = 33/160 (20%)
Query: 2 MDNRGNSSLPDKLPIFPDSAR----LPLTRSFYLEPM-----VTFHVHP---EAPVSSPY 49
M+N +L D+ P+ P S +P R L P V F ++P E P Y
Sbjct: 108 MNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPPAEPLGNVPFLLYPGPAEPPYYDAY 167
Query: 50 SEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCV 109
+ P +PFP G Y EY + PAF +KRNERERQRVKCV
Sbjct: 168 AGVFPYVPFPG---AFGVY------------------EYPFEPAFIQKRNERERQRVKCV 206
Query: 110 NEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
NEGYA+LR HLP EKRLSKVETLRAAI+YI YLQ LL
Sbjct: 207 NEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 106 bits (264), Expect = 1e-23
Identities = 72/160 (45%), Positives = 85/160 (53%), Gaps = 33/160 (20%)
Query: 2 MDNRGNSSLPDKLPIFPDSAR----LPLTRSFYLEPM-----VTFHVHP---EAPVSSPY 49
M+N +L D+ P+ P S +P R L P V F ++P E P Y
Sbjct: 108 MNNNFCRALVDRRPLGPPSCMQLGVMPPPRQAPLPPAEPLGNVPFLLYPGPAEPPYYDAY 167
Query: 50 SEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCV 109
+ P +PFP G Y EY + PAF +KRNERERQRVKCV
Sbjct: 168 AGVFPYVPFPG---AFGVY------------------EYPFEPAFIQKRNERERQRVKCV 206
Query: 110 NEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
NEGYA+LR HLP EKRLSKVETLRAAI+YI YLQ LL
Sbjct: 207 NEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 95.5 bits (236), Expect = 2e-20
Identities = 46/61 (75%), Positives = 52/61 (85%)
Query: 89 SYGPAFTRKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSL 148
++ PAF RKRNERERQRV+CVNEGYA+LR HLP E +KRLSKVETLRAAI YI +LQ L
Sbjct: 69 AFEPAFLRKRNERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQEL 128
Query: 149 L 149
L
Sbjct: 129 L 129
>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
Length = 236
Score = 71.2 bits (173), Expect = 4e-13
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 82 NYRGCEYSYG---PAFTRKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAA 138
N+ G YS PA +RNERER RVK VN G+A LR H+P K++SKVETLR+A
Sbjct: 104 NFSGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLREHVPNGAANKKMSKVETLRSA 163
Query: 139 IKYINYLQSLL 149
++YI LQ LL
Sbjct: 164 VEYIRALQQLL 174
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 67.0 bits (162), Expect = 8e-12
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 91 GPAFTRKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
G A +RNERER RVK VN G+ LR H+P K+LSKVETLR+A++YI LQ LL
Sbjct: 48 GAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLL 106
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 58.5 bits (140), Expect = 3e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPD 152
N RER+R++ +N+ + LR H+P EKRLSKV+TLR AI YIN+L L+ D
Sbjct: 169 NVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 222
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 51.6 bits (122), Expect = 4e-07
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 40 HPEAPVSSPYSEELPRLPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAF----- 94
H E P + P + P S+ L E + + + +Y G GP
Sbjct: 37 HEENPYFHGWLIGHPEMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPR 96
Query: 95 -TRKR---NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLY 150
++R N +ER+R + +N +A+LR +P + +LSK++TLR A YI YL LL
Sbjct: 97 PVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLA 156
Query: 151 PD 152
D
Sbjct: 157 KD 158
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
N RER+R+ +NE + QLR +P EKRLS++ETLR AI YI+++ LL
Sbjct: 107 NIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELL 157
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 51.2 bits (121), Expect = 5e-07
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 43 APVSSPYSEELPRLPFPSDSLILGNYSEPCPFSF----------PMPYPNYRGCEYSYGP 92
A ++P L L P SL G + EP F P PY E + GP
Sbjct: 127 AAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYE----MEITDGP 182
Query: 93 AFTRKR----NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSL 148
R N RER R + VN +A+LR +P +K+LSK E LR A+KYIN+L L
Sbjct: 183 HTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKL 242
Query: 149 LYPDKAE 155
L + E
Sbjct: 243 LNDQEEE 249
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 49.3 bits (116), Expect = 2e-06
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 85 GCEYSYGPAFTRK--RNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYI 142
G SY T++ N RERQR + +NE +A LR +P +K LSK++TL+ A +YI
Sbjct: 98 GSPQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYI 156
Query: 143 NYLQSLLYPDKAETK 157
++L +L D+ ++K
Sbjct: 157 DFLYQVLQSDELDSK 171
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 49.3 bits (116), Expect = 2e-06
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 95 TRK--RNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
TRK N RER R + VN +A+LR +P +K+LSK ETLR A++YIN+L +L
Sbjct: 2 TRKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVL 58
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKA 154
N RER R VN + LR +P E +++LSK+ETLR A YI++L ++L +A
Sbjct: 81 NARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEA 136
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 48.5 bits (114), Expect = 3e-06
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETK 157
N RERQR + +NE +A LR +P +K LSK++TL+ A +YI++L +L D+ + K
Sbjct: 72 NVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDEMDNK 129
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKA 154
N RER R VN + LR +P E +++LSK+ETLR A YI++L ++L +A
Sbjct: 81 NARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEA 136
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 48.1 bits (113), Expect = 4e-06
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
N RER R + VN + LR +P E ++++LSK+ETLR A YI +L ++L
Sbjct: 78 NARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 47.4 bits (111), Expect = 7e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 100 ERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPD------- 152
++ER+R + +N +A+LR +P + +LSK++TLR A YI YL +L D
Sbjct: 101 KKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQSGDPE 160
Query: 153 --KAETKNNPG 161
KAE K G
Sbjct: 161 AFKAELKKADG 171
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 47.0 bits (110), Expect = 9e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKN 158
N RER R + VN +A+LR LP +++LSK E LR A+KYI +L LL A
Sbjct: 156 NSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAA 215
Query: 159 NP 160
P
Sbjct: 216 GP 217
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 46.6 bits (109), Expect = 1e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 96 RKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAE 155
R N +ER+R+K +N G+A+L+ +P ++ SKV+ L+ A +YI L LL K
Sbjct: 68 RVANAKERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEGAKDS 127
Query: 156 TKNNPGKVSSMIATTSHH 173
K +P + S ++ H
Sbjct: 128 KKQDPDEQSYSNNSSESH 145
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 101 RERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
RER RV+ N +A+LR LP +K+LSK+E LR AI YI+YL +L
Sbjct: 85 RERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 101 RERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
RER RV+ N +A+LR LP +K+LSK+E LR AI YI+YL +L
Sbjct: 85 RERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 101 RERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
RER RV+ N +A+LR LP +K+LSK+E LR AI YI+YL +L
Sbjct: 83 RERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 45.1 bits (105), Expect = 3e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAETKN 158
N RER+R+ +N + QLR+ +P +K+LSK ETL+ A YIN L LL +
Sbjct: 165 NARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPSGGEQP 224
Query: 159 NPGKVSSMIATTSHH 173
P S + HH
Sbjct: 225 PPPPAS---CKSDHH 236
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 44.7 bits (104), Expect = 4e-05
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 56 LPFPSDSLILGNYSEPCPFSFPMPYPNYRGCEYSYGPAFTR--------KRNERERQRVK 107
LP P G S P + P R GP R + NERERQR+
Sbjct: 30 LPNPGPEPAKGLRSRPARAAARAPGEGRRRRPGPSGPGGRRDSSIQRRLESNERERQRMH 89
Query: 108 CVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
+N + LR +P +K+LSK+ETL A YI L + +
Sbjct: 90 KLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATI 131
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 44.7 bits (104), Expect = 4e-05
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAE 155
N RER R++ +++ +++L+ LP + +LSK++TLR A YI +L+ LL D+ E
Sbjct: 113 NARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYE 169
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 43.9 bits (102), Expect = 8e-05
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAE 155
N RER R++ +++ +++L+ LP + +LSK++TLR A YI +L+ +L DK E
Sbjct: 85 NARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYE 141
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 43.9 bits (102), Expect = 8e-05
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAE 155
N RER R++ +++ +++L+ LP + +LSK++TLR A YI +L+ +L DK E
Sbjct: 85 NARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYE 141
>gi|4505299 myogenic factor 6 [Homo sapiens]
Length = 242
Score = 42.0 bits (97), Expect = 3e-04
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 86 CEYSYGPAFTRKRNE-RERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINY 144
C+ P RK RER+R+K +NE + L+ +RL KVE LR+AI YI
Sbjct: 85 CKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIER 143
Query: 145 LQSLLY 150
LQ LL+
Sbjct: 144 LQDLLH 149
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 42.0 bits (97), Expect = 3e-04
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 99 NERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
N RER+R++ +N + +LR +P+ +K+LSK ETL+ A+ YI L +L
Sbjct: 46 NARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRIL 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,107,400
Number of Sequences: 37866
Number of extensions: 420044
Number of successful extensions: 1203
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1116
Number of HSP's gapped (non-prelim): 105
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.