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Search of human proteins with 10047102
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10047102 ribosomal protein L24-like [Homo sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10047102 ribosomal protein L24-like [Homo sapiens] 338 9e-94
gi|169213020 PREDICTED: similar to ribosomal protein L24-like [H... 285 9e-78
gi|89047474 PREDICTED: similar to ribosomal protein L24-like [Ho... 285 9e-78
gi|27485363 PREDICTED: similar to ribosomal protein L24-like [Ho... 285 9e-78
gi|239747737 PREDICTED: similar to hCG1644578 [Homo sapiens] 282 8e-77
gi|169164029 PREDICTED: similar to hCG1644578 [Homo sapiens] 136 7e-33
gi|169163248 PREDICTED: similar to hCG1644578 [Homo sapiens] 136 7e-33
gi|4506619 ribosomal protein L24 [Homo sapiens] 79 2e-15
gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2 ... 39 0.003
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 37 0.006
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 37 0.006
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 37 0.006
gi|12083581 phosphoinositide-specific phospholipase C beta 1 iso... 35 0.037
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 35 0.037
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 35 0.037
gi|154354979 myosin X [Homo sapiens] 33 0.084
gi|148746195 trichohyalin [Homo sapiens] 33 0.11
gi|33356544 phosphoinositide-specific phospholipase C beta 1 iso... 33 0.14
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 33 0.14
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i... 32 0.19
gi|12597655 centromere protein H [Homo sapiens] 32 0.19
gi|38788274 bromodomain PHD finger transcription factor isoform ... 32 0.19
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 32 0.19
gi|209862789 microtubule associated monoxygenase, calponin and L... 32 0.19
gi|8922071 zinc finger protein 821 [Homo sapiens] 32 0.19
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 32 0.24
gi|155722985 SMC5 protein [Homo sapiens] 32 0.24
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 32 0.24
gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo sapi... 32 0.32
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 32 0.32
>gi|10047102 ribosomal protein L24-like [Homo sapiens]
Length = 163
Score = 338 bits (868), Expect = 9e-94
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMEDAP 163
VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMEDAP
Sbjct: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMEDAP 163
>gi|169213020 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 285 bits (730), Expect = 9e-78
Identities = 138/160 (86%), Positives = 149/160 (93%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
MRIEKCYFCSGPIYPG+ M+F+ NDCKVF FCKSKCHK+FKKK NPRKVR TK F+KAAG
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KELTVDNSFEF+K RNE IKYQRELWNKTIDAMKRVEEIKQK QAKFIMNRLKKNKELQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDME 160
VQDIKEVKQ+IHL +A LAGKGK+LEEKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|89047474 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 285 bits (730), Expect = 9e-78
Identities = 138/160 (86%), Positives = 149/160 (93%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
MRIEKCYFCSGPIYPG+ M+F+ NDCKVF FCKSKCHK+FKKK NPRKVR TK F+KAAG
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KELTVDNSFEF+K RNE IKYQRELWNKTIDAMKRVEEIKQK QAKFIMNRLKKNKELQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDME 160
VQDIKEVKQ+IHL +A LAGKGK+LEEKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|27485363 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 285 bits (730), Expect = 9e-78
Identities = 138/160 (86%), Positives = 149/160 (93%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
MRIEKCYFCSGPIYPG+ M+F+ NDCKVF FCKSKCHK+FKKK NPRKVR TK F+KAAG
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KELTVDNSFEF+K RNE IKYQRELWNKTIDAMKRVEEIKQK QAKFIMNRLKKNKELQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDME 160
VQDIKEVKQ+IHL +A LAGKGK+LEEKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|239747737 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 161
Score = 282 bits (722), Expect = 8e-77
Identities = 140/162 (86%), Positives = 147/162 (90%), Gaps = 2/162 (1%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
M IEKCYFCSG IYPGH MMFV+N+CKVFRFC SK HKNFKKKRNPRKV WTKAF KAA
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KELTVDNSFEFEKRRNEPIKYQ ELWNKTI+A+KRVEEIKQKRQAKF++NRLKKNK LQK
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMEDA 162
+ KEVKQNIHLI APLAGKGKQL EKMVQQLQEDVDMEDA
Sbjct: 121 L--XKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDA 160
>gi|169164029 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 184
Score = 136 bits (343), Expect = 7e-33
Identities = 63/73 (86%), Positives = 65/73 (89%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
M IEKCYFCSG IYPGH MMFV+N+CKVFRFC SK HKNFKKKRNPRKV WTKAF KAA
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEK 73
KELTVDNSFEFEK
Sbjct: 61 KELTVDNSFEFEK 73
>gi|169163248 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 184
Score = 136 bits (343), Expect = 7e-33
Identities = 63/73 (86%), Positives = 65/73 (89%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
M IEKCYFCSG IYPGH MMFV+N+CKVFRFC SK HKNFKKKRNPRKV WTKAF KAA
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEK 73
KELTVDNSFEFEK
Sbjct: 61 KELTVDNSFEFEK 73
>gi|4506619 ribosomal protein L24 [Homo sapiens]
Length = 157
Score = 78.6 bits (192), Expect = 2e-15
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
M++E C F IYPGHG + R D KVF+F +KC F KRNPR++ WT +R+
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KELTVDNSFEFEKRR-NEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQ 119
K S E +K+R +K+QR + ++ +I KR K + + ++ + ++
Sbjct: 61 K----GQSEEIQKKRTRRAVKFQRAITGASL------ADIMAKRNQKPEVRKAQREQAIR 110
Query: 120 KVQDIKEVKQ 129
++ K+ KQ
Sbjct: 111 AAKEAKKAKQ 120
>gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2
[Homo sapiens]
Length = 1235
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 37 HKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQ-RELWNKTIDAMKR 95
+K K++ + T+ K ++ T + FEKRR+ ++ +++ + D KR
Sbjct: 375 YKELKEQVRKKVATMTQQLEKLQWEQKTDEERLAFEKRRHGEVQGNLKQIKEQIEDHKKR 434
Query: 96 VEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVK-------QNIHLIRAPLAGKGKQLEEK 148
+E++++ + + KK +E V +I++ K + ++LIR+ L G E
Sbjct: 435 IEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEFNEELNLIRSELQNAGIDTHEG 494
Query: 149 MVQQLQEDV 157
QQ + +V
Sbjct: 495 KRQQKRAEV 503
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 37.4 bits (85), Expect = 0.006
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 41 KKKRNPRKVRWTKAFR--KAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEE 98
+K+R ++ W K K K+ ++ E E+R++ +RE + ++ +R+E
Sbjct: 406 RKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIE---RREAAKQELERQRRLEW 462
Query: 99 IKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKM 149
+ +RQ ++N+ KN+E +++ + K+N+HL L GK +Q+ ++
Sbjct: 463 ERIRRQE--LLNQ--KNREQEEIVRLNSKKKNLHLELEALNGKHQQISGRL 509
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 37.4 bits (85), Expect = 0.006
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 41 KKKRNPRKVRWTKAFR--KAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEE 98
+K+R ++ W K K K+ ++ E E+R++ +RE + ++ +R+E
Sbjct: 406 RKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIE---RREAAKQELERQRRLEW 462
Query: 99 IKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKM 149
+ +RQ ++N+ KN+E +++ + K+N+HL L GK +Q+ ++
Sbjct: 463 ERIRRQE--LLNQ--KNREQEEIVRLNSKKKNLHLELEALNGKHQQISGRL 509
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 37.4 bits (85), Expect = 0.006
Identities = 27/111 (24%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 41 KKKRNPRKVRWTKAFR--KAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEE 98
+K+R ++ W K K K+ ++ E E+R++ +RE + ++ +R+E
Sbjct: 406 RKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIE---RREAAKQELERQRRLEW 462
Query: 99 IKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKM 149
+ +RQ ++N+ KN+E +++ + K+N+HL L GK +Q+ ++
Sbjct: 463 ERIRRQE--LLNQ--KNREQEEIVRLNSKKKNLHLELEALNGKHQQISGRL 509
>gi|12083581 phosphoinositide-specific phospholipase C beta 1 isoform
a [Homo sapiens]
Length = 1216
Score = 34.7 bits (78), Expect = 0.037
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 17 HGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRN 76
H + ++ V C++ K K+ K K K +++T S + +
Sbjct: 1034 HIKLLIQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEE 1093
Query: 77 EPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHL-IR 135
E + R + + +KR+EE + KRQ K + +K+KE++ Q I + K + + +
Sbjct: 1094 EKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLV----EKHKEIR--QQILDEKPKLQVELE 1147
Query: 136 APLAGKGKQLEEKMVQQLQE 155
K K+L ++++ +QE
Sbjct: 1148 QEYQDKFKRLPLEILEFVQE 1167
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 34.7 bits (78), Expect = 0.037
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 65 VDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDI 124
V+NS + + E K DA EE+K+++ + R+KKN E Q +
Sbjct: 1745 VENSIQESRNAEEKAK------KAITDAAMMAEELKKEQDTSAHLERMKKNLE----QTV 1794
Query: 125 KEVKQNI-HLIRAPLAGKGKQLE--EKMVQQLQEDVDME 160
K+++ + + L G KQ++ E V++L+ ++D+E
Sbjct: 1795 KDLQHRLDEAEQLALKGGKKQIQKLENRVRELENELDVE 1833
Score = 28.1 bits (61), Expect = 3.5
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 107 FIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLA---GKGKQLEEKMVQQLQEDVDME 160
F + L K+ E +K ++ +K++ + LA + K+LEEKMV LQE D++
Sbjct: 838 FKIKPLLKSAEAEK--EMATMKEDFERTKEELARSEARRKELEEKMVSLLQEKNDLQ 892
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 34.7 bits (78), Expect = 0.037
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 66 DNSFEFEKRRNEPIKYQRELWNKT-IDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDI 124
D + + ++R E K ++E T ++ +KRV+EI+ F+ + +KE++K +
Sbjct: 198 DEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEP 257
Query: 125 KEVKQ 129
EVKQ
Sbjct: 258 SEVKQ 262
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 33.5 bits (75), Expect = 0.084
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 70 EFEKRRNEPIKYQRELWNKTIDAMKRVEEIK--QKRQAKFIMNR-LKKNKELQKVQDIKE 126
E E+R E + + EL + + ++ +E++ QK Q + + R L+K KE ++V++I
Sbjct: 833 EEEERERERERREAELRAQQEEETRKQQELEALQKSQKEAELTRELEKQKENKQVEEILR 892
Query: 127 VKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDME 160
+++ I ++ + L E +Q+LQE D E
Sbjct: 893 LEKEIEDLQRMKEQQELSLTEASLQKLQERRDQE 926
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 33.1 bits (74), Expect = 0.11
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 38 KNFKKKRNPRKVRWTKAFRKAAGKELTVDNSF---EFEKRRNEPIKYQRELWNKT--IDA 92
K ++K+ R+ R + F++ KE + E EK + E + QREL + +
Sbjct: 221 KGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRK 280
Query: 93 MKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQ 152
++R E +++++ + RL++ ++L++ Q+ + +Q R + +Q EE+ QQ
Sbjct: 281 LERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEE--RREQQERREQQEERREQQ 338
Query: 153 LQED 156
L+ +
Sbjct: 339 LRRE 342
Score = 28.1 bits (61), Expect = 3.5
Identities = 20/90 (22%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 72 EKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNI 131
++RR + +K ++E + +KR EE +Q+R + RL++ + ++V+ +++ ++
Sbjct: 560 QERREQRLKREQE--ERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERRE 617
Query: 132 HLIRAPLAGKGKQLEEKMVQQLQEDVDMED 161
+ K ++ EE+ QQL + + E+
Sbjct: 618 QRL------KREEPEEERRQQLLKSEEQEE 641
Score = 27.7 bits (60), Expect = 4.6
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 70 EFEKRRNEP----IKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIK 125
E E R EP ++ +++L + EE + +RQ + R ++++ ++ + ++
Sbjct: 1505 EQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLR 1564
Query: 126 EVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMED 161
+ ++ L R K + E+K+ +Q QE MED
Sbjct: 1565 QEREEQQLSRQERDRKFRLEEQKVRRQEQERKFMED 1600
>gi|33356544 phosphoinositide-specific phospholipase C beta 1 isoform
b [Homo sapiens]
Length = 1173
Score = 32.7 bits (73), Expect = 0.14
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 17 HGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRN 76
H + ++ V C++ K K+ K K K +++T S + +
Sbjct: 1034 HIKLLIQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEE 1093
Query: 77 EPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKEL-QKVQDIK 125
E + R + + +KR+EE + KRQ K + +K+KE+ Q++ D K
Sbjct: 1094 EKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLV----EKHKEIRQQILDEK 1139
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 32.7 bits (73), Expect = 0.14
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 34 SKCHKNFKKKRNPRKVRWTKAFRKA------AGKELTV--DNSFEFEKRRNEPIKYQREL 85
S K K P V+ A ++A A KE TV + + E ++ E K ++E+
Sbjct: 601 SVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEV 660
Query: 86 WNKTIDA-MKRVEEIKQKRQAKFIMNRLKKN------KELQKVQDIKEVKQNIHLIRAPL 138
K +K+ E+ K++ K + +KK KE++K KEVK+ +
Sbjct: 661 AKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKE 720
Query: 139 AGKGKQLEEKMVQQLQEDVDMEDAP 163
K ++ +K +++L +D P
Sbjct: 721 VKKEEKEPKKEIKKLPKDAKKSSTP 745
>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
isoform 1 [Homo sapiens]
Length = 721
Score = 32.3 bits (72), Expect = 0.19
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 90 IDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQN-IHLIRAPLAGKGKQLEEK 148
+D +K V E ++++ A+F +K+KEL++ + + V Q+ + ++ L + + +EEK
Sbjct: 400 VDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEEK 459
Query: 149 MVQQLQEDVD 158
Q++Q+ +D
Sbjct: 460 --QRMQQKID 467
>gi|12597655 centromere protein H [Homo sapiens]
Length = 247
Score = 32.3 bits (72), Expect = 0.19
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 30/148 (20%)
Query: 42 KKRNPRKVRWTKAFRKAAGK-----ELTVDNSFEFEKRRNEPIKYQRELWN---KTIDAM 93
KK ++R + A +K K + +DN + +K Q+E W+ K +D
Sbjct: 99 KKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR 158
Query: 94 KRVEEIKQKRQAKFIMNRLKKNKE------LQKVQDIKEVKQNI-----------HLIRA 136
K+ ++KQ ++K + + +KNK+ ++ + IK ++QN+ H+ +
Sbjct: 159 KKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQN 218
Query: 137 PLAGKGKQLEE-----KMVQQLQEDVDM 159
+ G E ++V QL+++VDM
Sbjct: 219 LILGSKVNWAEDPALKEIVLQLEKNVDM 246
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 32.3 bits (72), Expect = 0.19
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 10/139 (7%)
Query: 26 CKVFRFCKSKCHKNFKKKRN-PRKVRWT-KAFRKAAGKELTVD-----NSFEFEKRRNEP 78
CK+ + + H++ + K R + K+F AA +E+ + K E
Sbjct: 517 CKILEEMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEET 576
Query: 79 IKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQ---KVQDIKEVKQNIHLIR 135
K + E N + DA K EE + + K ++ + Q +V D K K N L
Sbjct: 577 EKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEVGDFKSEKSNGELSE 636
Query: 136 APLAGKGKQLEEKMVQQLQ 154
+P AGKG +++ +L+
Sbjct: 637 SPGAGKGASGSTRIITRLR 655
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 32.3 bits (72), Expect = 0.19
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 52 TKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRV--EEIKQKRQAKFIM 109
T+A R+ + + +++ K +NE +KYQ EL + I R+ +E K K +A +
Sbjct: 325 TEALRRQEQNIKSFEETYD-RKLKNELLKYQLELKDDYIIRTNRLIEDERKNKEKAVHLQ 383
Query: 110 NRL-----KKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQ---LEEKM 149
L KK + Q V +KE++ + ++A KQ L EK+
Sbjct: 384 EELIAINSKKEELNQSVNRVKELELELESVKAQSLAITKQNHMLNEKV 431
Score = 31.2 bits (69), Expect = 0.41
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 26 CKVFRFCK----SKCHKNFKKKRNPRKVRWTKAFRKAAG---------KELTVDNSFEFE 72
C+ +F K +K KKK + F KA ++ T++ + +
Sbjct: 216 CQKLKFFKDTEIAKIKMEAKKKYEKELTMFQNDFEKACQAKSEALVLREKSTLERIHKHQ 275
Query: 73 KRRNEPIKYQRELWNKTIDAMK-RVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNI 131
+ + I QR+L K +D ++ R E+KQ+ +A + +L++ K + ++ +QNI
Sbjct: 276 EIETKEIYAQRQLLLKDMDLLRGREAELKQRVEAFELNQKLQEEKHKSITEALRRQEQNI 335
Query: 132 HLIRAPLAGKGKQLEEKMVQQLQED 156
K K K +L++D
Sbjct: 336 KSFEETYDRKLKNELLKYQLELKDD 360
Score = 29.3 bits (64), Expect = 1.6
Identities = 17/84 (20%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 78 PIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAP 137
P+ YQ + ++D K++EE K++ + + + ++ +E ++ +++EV +
Sbjct: 860 PLSYQ----HPSVD-QKQIEEQKEEEKIREQQVKERRQREERRQSNLQEVLERERRELEK 914
Query: 138 LAGKGKQLEEKMVQQLQEDVDMED 161
L + K +EE + +++++++ME+
Sbjct: 915 LYQERKMIEESLKIKIKKELEMEN 938
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 32.3 bits (72), Expect = 0.19
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 41 KKKRNPRKVRWTKAFRKAAGKELTVDNS-----FEFEKRRNEPIKYQRELWNKTIDAMKR 95
+++ R V KA R AG D F+ + +N ++Y+ EL I A +
Sbjct: 1865 QRRLEERGVAVEKALRGEAGMGKKDDPKLMQEWFKLVQEKNAMVRYESELM---IFAREL 1921
Query: 96 VEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQ---LEEKMVQQ 152
E +Q R + + R+ L+ +++ E KQ ++ + + + LEE+ +++
Sbjct: 1922 ELEDRQSRLQQELRERMAVEDHLKTEEELSEEKQILNEMLEVVEQRDSLVALLEEQRLRE 1981
Query: 153 LQEDVDMEDA 162
+ED D+E A
Sbjct: 1982 REEDKDLEAA 1991
>gi|8922071 zinc finger protein 821 [Homo sapiens]
Length = 370
Score = 32.3 bits (72), Expect = 0.19
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 24/135 (17%)
Query: 10 SGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKK-----KRNPRKVRWTKAFRKAAGKELT 64
S P+YP G++ V N+C +R + +K + P +VR + R+ K+
Sbjct: 184 SPPVYPA-GILLVCNNCAAYRKLLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSR 242
Query: 65 VDNSFEFEK--------------RRNEPIKYQRELWNKTIDAM--KRVEEIKQKRQAKFI 108
DN E+ R E + + + +AM KR E +KRQA+ I
Sbjct: 243 RDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLI 302
Query: 109 MNRLKK--NKELQKV 121
R K + L+K+
Sbjct: 303 REREAKRLKRRLEKM 317
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 32.0 bits (71), Expect = 0.24
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 91 DAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNI-HLIRAPLAGKGKQLE--E 147
DA EE+K+++ + R+KKN E Q IK+++ + + L G KQL+ E
Sbjct: 1761 DAAMMAEELKKEQDTSAHLERMKKNME----QTIKDLQHRLDEAEQIALKGGKKQLQKLE 1816
Query: 148 KMVQQLQEDVDME 160
V++L+ +++ E
Sbjct: 1817 ARVRELENELEAE 1829
>gi|155722985 SMC5 protein [Homo sapiens]
Length = 1101
Score = 32.0 bits (71), Expect = 0.24
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
KE + + E+ NE + + K D + ++ KQK+ ++ R K+K +++
Sbjct: 300 KEGQIPVTCRIEEMENERHNLEARIKEKATDIKEASQKCKQKQD---VIER--KDKHIEE 354
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMED 161
+Q VKQN L R G +++ E + +L+ + E+
Sbjct: 355 LQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCEN 395
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 32.0 bits (71), Expect = 0.24
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 68 SFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEV 127
S E E+ E + + + DA EE+K+++ + R+KK E Q ++E+
Sbjct: 1787 SGEVEEAAQERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKTLE----QTVREL 1842
Query: 128 KQNI-HLIRAPLAGKGKQLE--EKMVQQLQEDVDME 160
+ + +A L G KQ++ E V++L+ ++D E
Sbjct: 1843 QARLEEAEQAALRGGKKQVQKLEAKVRELEAELDAE 1878
>gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo
sapiens]
Length = 1085
Score = 31.6 bits (70), Expect = 0.32
Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 74 RRNEPIKYQR-ELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNK 116
R +P+ + R E ++ ++K++E++K+KRQAK+ N+LK K
Sbjct: 195 RSGDPVFHIRLEERHQRRSSVKKIEKMKEKRQAKYSENKLKSIK 238
Score = 26.9 bits (58), Expect = 7.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 110 NRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMED 161
+R KK+KE+ I E + + IRA L + K LE++ ++Q D++D
Sbjct: 5 SRFKKDKEI-----IAEYESQVKEIRAQLVEQQKCLEQQTEMRVQLLQDLQD 51
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 31.6 bits (70), Expect = 0.32
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 33 KSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDA 92
K K H+ +K R + W + K +E + E R+ E I+ Q E + +
Sbjct: 542 KEKIHEQEEKIRKQEEKMWRQE-EKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEK 600
Query: 93 MKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQ 152
++ EE+ Q+++ K K ++ +K+Q+ +E + K ++ EEK+ +Q
Sbjct: 601 IREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQ 660
Query: 153 LQEDVDMED 161
+ + E+
Sbjct: 661 EEMMQEQEE 669
Score = 29.6 bits (65), Expect = 1.2
Identities = 21/92 (22%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 72 EKRRNEPIKYQRE---LWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVK 128
EK R + K +R+ +W K + M+R EE+ +++ K R ++ +K + I+E++
Sbjct: 389 EKIREQEEKMRRQEEMMWEKE-EKMRRQEEMMWEKEEKM---RRQEEMMWEKEEKIRELE 444
Query: 129 QNIHLIRAPLAGKGKQLEEKMVQQLQEDVDME 160
+ +H + K+ EE+ +++ ++ + E
Sbjct: 445 EKMHEQEKIREQEEKRQEEEKIREQEKRQEQE 476
Score = 29.3 bits (64), Expect = 1.6
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 70 EFEKRRNEPIKYQRE---------LWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
E + RR E + +++E +W K + M+R EE+ +++ K I +K E +K
Sbjct: 395 EEKMRRQEEMMWEKEEKMRRQEEMMWEKE-EKMRRQEEMMWEKEEK-IRELEEKMHEQEK 452
Query: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMED 161
+++ +E +Q IR K ++ E KM +Q ++ + E+
Sbjct: 453 IREQEEKRQEEEKIRE--QEKRQEQEAKMWRQEEKIREQEE 491
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,217,806
Number of Sequences: 37866
Number of extensions: 259007
Number of successful extensions: 1531
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 1318
Number of HSP's gapped (non-prelim): 336
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.