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Search of human proteins with 18643385
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 583 e-167
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 583 e-167
gi|30520327 F-box protein 27 [Homo sapiens] 336 2e-92
gi|15812198 F-box only protein 2 [Homo sapiens] 181 5e-46
gi|8922188 F-box only protein 6 [Homo sapiens] 174 8e-44
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens] 163 2e-40
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens] 163 2e-40
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 75 8e-14
gi|34878749 F-box protein 44 isoform 2 [Homo sapiens] 67 2e-11
gi|34878753 F-box protein 44 isoform 2 [Homo sapiens] 67 2e-11
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 40 0.002
gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens] 38 0.011
gi|27312027 F-box only protein 16 [Homo sapiens] 37 0.025
gi|83035136 F-box protein 31 [Homo sapiens] 36 0.042
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 35 0.094
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 35 0.094
gi|122937219 F-box protein 41 [Homo sapiens] 35 0.094
gi|85540447 solute carrier family 26, member 11 [Homo sapiens] 32 0.47
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 32 0.80
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 32 0.80
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 32 0.80
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 31 1.4
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 31 1.4
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 31 1.4
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 31 1.4
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 31 1.4
gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo ... 30 2.3
gi|239750878 PREDICTED: hypothetical protein [Homo sapiens] 30 2.3
gi|239745238 PREDICTED: hypothetical protein XP_002343415 [Homo ... 30 2.3
gi|118601070 hypothetical protein LOC158724 [Homo sapiens] 30 3.0
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 583 bits (1503), Expect = e-167
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 60
MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL
Sbjct: 10 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 69
Query: 61 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 120
LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR
Sbjct: 70 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 129
Query: 121 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 180
GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE
Sbjct: 130 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 189
Query: 181 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 240
ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG
Sbjct: 190 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 249
Query: 241 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 250 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 583 bits (1503), Expect = e-167
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 60
MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL
Sbjct: 1 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 60
Query: 61 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 120
LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR
Sbjct: 61 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 120
Query: 121 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 180
GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE
Sbjct: 121 GWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIE 180
Query: 181 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 240
ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG
Sbjct: 181 ICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFG 240
Query: 241 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS
Sbjct: 241 KGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 336 bits (861), Expect = 2e-92
Identities = 164/286 (57%), Positives = 202/286 (70%), Gaps = 11/286 (3%)
Query: 1 MGARLSR---RRLPA---DPSLALDA--LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDI 52
MGA +SR R+PA +P ALD LPPELL+ VLSHVPPR+L+ RCR VCR WR +
Sbjct: 1 MGASVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRAL 60
Query: 53 VDGPTVWLLQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFN 112
VDG +WLL LARD A GRAL +A+ C + C L R+C R P GRNLI N
Sbjct: 61 VDGQALWLLILARDHGATGRALLHLARSCQSPARNARP---CPLGRFCARRPIGRNLIRN 117
Query: 113 SCGEQGFRGWEVEHGGNGWAIEKNLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQE 172
CG++G R W V+HGG+GW +E+N T VPGAPSQTCFVTSF WC K+Q++DL EG+W E
Sbjct: 118 PCGQEGLRKWMVQHGGDGWVVEENRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPE 177
Query: 173 LLDSAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQV 232
LLDS +IEICV+DWWGAR + GC+Y+L V+LLD + + KFSA PDP+ QW C V
Sbjct: 178 LLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHV 237
Query: 233 SHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
+HVF+N G+R+VSFE G+D W GHYGA VT+SSV VR+RLS
Sbjct: 238 THVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 181 bits (460), Expect = 5e-46
Identities = 100/267 (37%), Positives = 152/267 (56%), Gaps = 30/267 (11%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 77
LD LP LL++VL+ +P LV CR VC W+++VDG +WLL+ ++ +
Sbjct: 47 LDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGGV--- 103
Query: 78 AQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFRGW-EVEHGGNGWAIEKN 136
E+++ + ++ + RNL+ N CGE+ GW +VEHGG+GW +E+
Sbjct: 104 -------EEERDHWQ-----QFYFLSKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEE- 150
Query: 137 LTPVPGAPS---------QTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWW 187
+PG + F +SFEWC K Q++DL EG W+ELLD+ Q I V DW+
Sbjct: 151 ---LPGDSGVEFTHDESVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWY 207
Query: 188 GARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTE-RGCRQVSHVFTNFGKGIRYV 246
R + GC+Y+L V+LL +E + +FS+ V Q ++ G ++SH FT++G G+R+V
Sbjct: 208 SGRSDAGCLYELTVKLLSEHENVLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFV 267
Query: 247 SFEQYGRDVSSWVGHYGALVTHSSVRV 273
FE G+D W G +GA VT+SSV V
Sbjct: 268 RFEHGGQDSVYWKGWFGARVTNSSVWV 294
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 174 bits (441), Expect = 8e-44
Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 25/269 (9%)
Query: 17 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYA 76
+++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLW----------------- 54
Query: 77 VAQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAI 133
++CL +++ P+ + RNL+ N C E+ W+++ +GG+ W +
Sbjct: 55 -KRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKV 113
Query: 134 EK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGA 189
E + T P + FVTS+E C K QLVDLV EG W+ELLD+ + +I V DW+ A
Sbjct: 114 ESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAA 173
Query: 190 RENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFE 249
R +CGC YQL+V+L + F P + QW +VS+ F+++ +G+RY+ F+
Sbjct: 174 RADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQ 233
Query: 250 QYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
GRD W G YG VT+SS+ V +++
Sbjct: 234 HGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 163 bits (412), Expect = 2e-40
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 77
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 78 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 134
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
Query: 135 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 190
P + FVTS+ C K Q+VDL EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167
Query: 191 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 250
+CG YQL V+LL + F P + Q ++ R+VSH F+N+ G+RY+ F+
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227
Query: 251 YGRDVSSWVGHYGALVTHSSVRV 273
G D W G YG VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250
>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 163 bits (412), Expect = 2e-40
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 25/263 (9%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 77
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 78 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 134
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
Query: 135 K----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGAR 190
P + FVTS+ C K Q+VDL EG W+EL+D+ + +I V DW+ AR
Sbjct: 108 DLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAAR 167
Query: 191 ENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQ 250
+CG YQL V+LL + F P + Q ++ R+VSH F+N+ G+RY+ F+
Sbjct: 168 PDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQH 227
Query: 251 YGRDVSSWVGHYGALVTHSSVRV 273
G D W G YG VT+SS+ +
Sbjct: 228 GGVDTHYWAGWYGPRVTNSSITI 250
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 74.7 bits (182), Expect = 8e-14
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 155 WCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLD------VYE 208
W K+Q VDL+ EG+W+ELLD Q I V DW+ CVY+L V LL + +
Sbjct: 152 WTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQ 211
Query: 209 KEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTH 268
V ++ P +W QVSHVF ++G G+R++ F ++ G VT
Sbjct: 212 HHVAPRTSGRGPPGRWV-----QVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTD 266
Query: 269 SSVRVRIR 276
SSV V++R
Sbjct: 267 SSVSVQLR 274
>gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 77
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 78 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 134
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
>gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 66.6 bits (161), Expect = 2e-11
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAV 77
++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 6 INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLW------------------ 47
Query: 78 AQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAIE 134
++CL E++ P+ + RNL+ N C E+GF W ++ +GG+ W +E
Sbjct: 48 KRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVE 107
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 4 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW-LLQ 62
RL+ R P ++D LP +VQ+ S +P L RC VCR W ++ P +W ++
Sbjct: 102 RLASR--PQKEQASIDRLPDHSMVQIFSFLPTNQLC-RCARVCRRWYNLAWDPRLWRTIR 158
Query: 63 LARDRSAEGRALYAVAQR 80
L + RAL + +R
Sbjct: 159 LTGETINVDRALKVLTRR 176
>gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]
Length = 458
Score = 37.7 bits (86), Expect = 0.011
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 9 RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLAR 65
R+ A L +LPPELL+++ S++ R ++ VC A RD+V W L+ R
Sbjct: 70 RVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLRALR 126
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 36.6 bits (83), Expect = 0.025
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 4 RLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQL 63
R + ++PA+ LP L + + S + PRSL RC VC W+++ + +W+L+
Sbjct: 75 RKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKC 133
Query: 64 AR 65
R
Sbjct: 134 LR 135
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 35.8 bits (81), Expect = 0.042
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 1 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+G L P P +L LPPELLV++ + +P L + + VC +R I+ T+W
Sbjct: 50 VGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPGTDLPSLAQ-VCTKFRRILHTDTIW 107
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 34.7 bits (78), Expect = 0.094
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 16 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+++ PPEL+ ++S +P R LV + CR + ++ DG VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 34.7 bits (78), Expect = 0.094
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 16 LALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+++ PPEL+ ++S +P R LV + CR + ++ DG VW
Sbjct: 37 ISIQLFPPELVEHIISFLPVRDLVALGQ-TCRYFHEVCDGEGVW 79
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 34.7 bits (78), Expect = 0.094
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 2 GARLSRRRLPADPSLALDALPPELLVQ------VLSHVPPRSLVTRCRPVCRAWRDIVDG 55
G+ RR PS + + + PE+L + +++ R+L+ VCR WR +
Sbjct: 588 GSGRGRRAERVSPSRSNEVISPEILKMRAALFCIFTYLDTRTLL-HAAEVCRDWRFVARH 646
Query: 56 PTVWLLQLARDRSAEGRALYAVAQRC 81
P VW L + + L +AQ C
Sbjct: 647 PAVWTRVLLENARVCSKFLAMLAQWC 672
>gi|85540447 solute carrier family 26, member 11 [Homo sapiens]
Length = 606
Score = 32.3 bits (72), Expect = 0.47
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 17 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRAL 74
A++AL E+L + L PPR LV C VC +V G L +L +D +G AL
Sbjct: 493 AMEALREEILSRALEVSPPRCLVLECTHVCSIDYTVVLG----LGELLQDFQKQGVAL 546
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 31.6 bits (70), Expect = 0.80
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 10 LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 56
LP +L+ + +LP E+L V + +P L VC WR+I+ P
Sbjct: 254 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 301
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 31.6 bits (70), Expect = 0.80
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 10 LPADPSLA-LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGP 56
LP +L+ + +LP E+L V + +P L VC WR+I+ P
Sbjct: 203 LPCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDP 250
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
sapiens]
Length = 326
Score = 31.6 bits (70), Expect = 0.80
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
LP +L+++ S++P R + R VC W+ +VD +W
Sbjct: 7 LPDSVLLEIFSYLPVRDRI-RISRVCHRWKRLVDDRWLW 44
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 163 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 203
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 281 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 321
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 18 LDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVW 59
+ LP EL + VLS + P+ L+ + CR WR + + +W
Sbjct: 201 ISLLPKELALYVLSFLEPKDLL-QAAQTCRYWRILAEDNLLW 241
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 19 DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 59
D +P E+LVQ+ + P + R VCR W++ P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 30.8 bits (68), Expect = 1.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 19 DALPPELLVQVLSHVP----PRSLVTRCRPVCRAWRDIVDGPTVW 59
D +P E+LVQ+ + P + R VCR W++ P +W
Sbjct: 113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|239756352 PREDICTED: hypothetical protein XP_002344902 [Homo
sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 16 LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 61
++ ++PP + QV PP L + C P+C + GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202
>gi|239750878 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 16 LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 61
++ ++PP + QV PP L + C P+C + GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202
>gi|239745238 PREDICTED: hypothetical protein XP_002343415 [Homo
sapiens]
Length = 211
Score = 30.0 bits (66), Expect = 2.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 16 LALDALPPELLVQVLSHVPPRSLVTRCRPVCR-AWRDIVDGPTVWLL 61
++ ++PP + QV PP L + C P+C + GP++WLL
Sbjct: 156 ISSSSVPPSPISQVSPASPPPPLPSSCLPMCSLVPSPLGTGPSLWLL 202
>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
Length = 791
Score = 29.6 bits (65), Expect = 3.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 5 LSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 57
+++ L P+L D +PP+LL+QVL H+ P + C + PT
Sbjct: 126 MAKHPLAMYPNLGED-MPPDLLLQVLKHLDPERELEDAWACCETQEKTTEVPT 177
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,166,907
Number of Sequences: 37866
Number of extensions: 569938
Number of successful extensions: 1643
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1579
Number of HSP's gapped (non-prelim): 73
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.