Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 18640736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens] 1117 0.0
gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo... 499 e-141
gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo... 478 e-135
gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens] 91 4e-18
gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens] 90 6e-18
gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens] 89 8e-18
gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens] 89 1e-17
gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 47 5e-05
gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isofor... 47 5e-05
gi|116812600 START domain containing 10 [Homo sapiens] 46 1e-04
gi|21040261 START domain containing protein 6 [Homo sapiens] 38 0.028
gi|215820652 StAR-related lipid transfer (START) domain containi... 33 0.52
gi|215820650 StAR-related lipid transfer (START) domain containi... 33 0.52
gi|31543659 StAR-related lipid transfer (START) domain containin... 33 0.52
gi|151301035 START domain containing 7 [Homo sapiens] 33 0.89
gi|110349717 titin isoform novex-2 [Homo sapiens] 31 3.4
gi|110349713 titin isoform novex-1 [Homo sapiens] 31 3.4
gi|110349715 titin isoform N2-B [Homo sapiens] 31 3.4
gi|41281907 StAR-related lipid transfer (START) domain containin... 30 4.4
gi|16445031 StAR-related lipid transfer (START) domain containin... 30 4.4
gi|41281898 StAR-related lipid transfer (START) domain containin... 30 4.4
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 30 4.4
gi|11968009 SIL1 protein precursor [Homo sapiens] 30 7.6
gi|83641896 SIL1 protein precursor [Homo sapiens] 30 7.6
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 29 9.9
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 29 9.9
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 29 9.9
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 29 9.9
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 29 9.9
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 29 9.9
>gi|18640736 acyl-CoA thioesterase 12 [Homo sapiens]
Length = 555
Score = 1117 bits (2889), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MERPAPGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQ 60
MERPAPGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQ
Sbjct: 1 MERPAPGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQ 60
Query: 61 FEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEK 120
FEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEK
Sbjct: 61 FEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEK 120
Query: 121 IHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRG 180
IHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRG
Sbjct: 121 IHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRG 180
Query: 181 TSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPST 240
TSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPST
Sbjct: 181 TSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPST 240
Query: 241 VGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITF 300
VGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITF
Sbjct: 241 VGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITF 300
Query: 301 PRIQPISKDDFRRYRGAIARKRIRLGRKYVISHKEEVPLCIHWDISKQASLSDSNVEALK 360
PRIQPISKDDFRRYRGAIARKRIRLGRKYVISHKEEVPLCIHWDISKQASLSDSNVEALK
Sbjct: 301 PRIQPISKDDFRRYRGAIARKRIRLGRKYVISHKEEVPLCIHWDISKQASLSDSNVEALK 360
Query: 361 KLAAKRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHF 420
KLAAKRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHF
Sbjct: 361 KLAAKRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHF 420
Query: 421 VSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVP 480
VSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVP
Sbjct: 421 VSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVP 480
Query: 481 PSPQYIRSEIICAGFLIHAIDSNSCIVSYFNHMSASILPYFAGNLGGWSKSIEETAASCI 540
PSPQYIRSEIICAGFLIHAIDSNSCIVSYFNHMSASILPYFAGNLGGWSKSIEETAASCI
Sbjct: 481 PSPQYIRSEIICAGFLIHAIDSNSCIVSYFNHMSASILPYFAGNLGGWSKSIEETAASCI 540
Query: 541 QFLENPPDDGFVSTF 555
QFLENPPDDGFVSTF
Sbjct: 541 QFLENPPDDGFVSTF 555
>gi|22165400 thioesterase, adipose associated isoform BFIT2 [Homo
sapiens]
Length = 594
Score = 499 bits (1286), Expect = e-141
Identities = 271/546 (49%), Positives = 358/546 (65%), Gaps = 5/546 (0%)
Query: 6 PGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETA 65
P EV MSQ + P H RGELS GQLLKWIDTTACL+AE+HAG CVTAS+DDI FE T
Sbjct: 44 PTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTI 103
Query: 66 RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125
VGQV+ IKAKV RAF++SME+ I+V +D+ + + V A +TFVA+ K+ LK
Sbjct: 104 SVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARRE-ITKVKLKQ 162
Query: 126 VTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRGTSVQS 185
+T TE++ +EH++AAERR++RL + DT +L+ + DL + V T V+S
Sbjct: 163 ITPRTEEEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVES 222
Query: 186 IELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRL 245
+ELVLPPHANH GNTFGGQIMAWME VATI+ASRLC AHP LK+++MF FRGPS VGDRL
Sbjct: 223 VELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRL 282
Query: 246 VFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRIQP 305
V AIVNN F+ +EVGV VEA+ ++ AE RHINSAF+ + D + P I+P
Sbjct: 283 VLKAIVNNAFKHSMEVGVCVEAY--RQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRP 340
Query: 306 ISKDDFRRYRGAIARKRIRLGRKYVISHKE-EVPLCIHWDISKQASLSDSNVEALKKLAA 364
D RRYR A ARK+IRL RKY++S K+ EVPL + WD S Q LS +NV +LK L A
Sbjct: 341 QPGDGERRYREASARKKIRLDRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVA 400
Query: 365 KRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHFVSCE 424
K W ++S + ++++YTLE+ LS +E V A A+ LLSD +RP WD H+ S E
Sbjct: 401 KDNWVLSSEISQVRLYTLEDDKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVE 460
Query: 425 VIDWVSEDDQLYHITCPIL-NDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPPSP 483
++ V EDD +YH+T P L KP+D V+L SRRKP +G+ Y +A++SV LP+ +P
Sbjct: 461 LVQQVDEDDAIYHVTSPALGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 520
Query: 484 QYIRSEIICAGFLIHAIDSNSCIVSYFNHMSASILPYFAGNLGGWSKSIEETAASCIQFL 543
+Y R E +C+GF + VSY+N + +L Y N+ G S T +C QFL
Sbjct: 521 EYRRGETLCSGFCLWREGDQLTKVSYYNQATPGVLNYVTTNVAGLSSEFYTTFKACEQFL 580
Query: 544 ENPPDD 549
+ +D
Sbjct: 581 LDNRND 586
>gi|22165355 thioesterase, adipose associated isoform BFIT1 [Homo
sapiens]
Length = 607
Score = 478 bits (1230), Expect = e-135
Identities = 256/494 (51%), Positives = 336/494 (68%), Gaps = 5/494 (1%)
Query: 6 PGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETA 65
P EV MSQ + P H RGELS GQLLKWIDTTACL+AE+HAG CVTAS+DDI FE T
Sbjct: 44 PTEVQMSQLVLPCHTNQRGELSVGQLLKWIDTTACLSAERHAGCPCVTASMDDIYFEHTI 103
Query: 66 RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125
VGQV+ IKAKV RAF++SME+ I+V +D+ + + V A +TFVA+ K+ LK
Sbjct: 104 SVGQVVNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVCKALATFVARRE-ITKVKLKQ 162
Query: 126 VTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTRGTSVQS 185
+T TE++ +EH++AAERR++RL + DT +L+ + DL + V T V+S
Sbjct: 163 ITPRTEEEKMEHSVAAERRRMRLVYADTIKDLLANCAIQGDLESRDCSRMVPAEKTRVES 222
Query: 186 IELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRL 245
+ELVLPPHANH GNTFGGQIMAWME VATI+ASRLC AHP LK+++MF FRGPS VGDRL
Sbjct: 223 VELVLPPHANHQGNTFGGQIMAWMENVATIAASRLCRAHPTLKAIEMFHFRGPSQVGDRL 282
Query: 246 VFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRIQP 305
V AIVNN F+ +EVGV VEA+ ++ AE RHINSAF+ + D + P I+P
Sbjct: 283 VLKAIVNNAFKHSMEVGVCVEAY--RQEAETHRRHINSAFMTFVVLDADDQPQLLPWIRP 340
Query: 306 ISKDDFRRYRGAIARKRIRLGRKYVISHKE-EVPLCIHWDISKQASLSDSNVEALKKLAA 364
D RRYR A ARK+IRL RKY++S K+ EVPL + WD S Q LS +NV +LK L A
Sbjct: 341 QPGDGERRYREASARKKIRLDRKYIVSCKQTEVPLSVPWDPSNQVYLSYNNVSSLKMLVA 400
Query: 365 KRGWEVTSTVEKIKIYTLEEHDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHFVSCE 424
K W ++S + ++++YTLE+ LS +E V A A+ LLSD +RP WD H+ S E
Sbjct: 401 KDNWVLSSEISQVRLYTLEDDKFLSFHMEMVVHVDAAQAFLLLSDLRQRPEWDKHYRSVE 460
Query: 425 VIDWVSEDDQLYHITCPIL-NDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPPSP 483
++ V EDD +YH+T P L KP+D V+L SRRKP +G+ Y +A++SV LP+ +P
Sbjct: 461 LVQQVDEDDAIYHVTSPALGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 520
Query: 484 QYIRSEIICAGFLI 497
+Y R E +C+GF +
Sbjct: 521 EYRRGETLCSGFCL 534
>gi|32528282 acyl-CoA thioesterase 7 isoform hBACHb [Homo sapiens]
Length = 380
Score = 90.5 bits (223), Expect = 4e-18
Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 19/320 (5%)
Query: 4 PAPGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVD 57
P G + + ++P A G + G +LK I+ + + +H G CV A V+
Sbjct: 49 PPCGACITGRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVE 108
Query: 58 DIQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVG 117
F +G+V + A++T S+E+ + VM +++LTG +KL + A +V
Sbjct: 109 RTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP---- 164
Query: 118 KEKIHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEG 174
+ LK V + E V ++ + + R ++E M+ + D++ + E
Sbjct: 165 ---LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPN 221
Query: 175 AVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFK 234
VS +S+ I LV P HG GG M M+ VA I A+R C + SVD
Sbjct: 222 TVSYSQSSL--IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAIN 279
Query: 235 FRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDK 294
F G + + + T +E+ V V+A + ++ R R SAF Y + +
Sbjct: 280 FHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQE 338
Query: 295 ENLITFPRIQPISKDDFRRY 314
+ P++ P ++D+ +R+
Sbjct: 339 GRSLPVPQLVPETEDEKKRF 358
>gi|75709208 acyl-CoA thioesterase 7 isoform hBACHa [Homo sapiens]
Length = 370
Score = 89.7 bits (221), Expect = 6e-18
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 6 PGEVVMSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVDDI 59
P + + + ++P A G + G +LK I+ + + +H G CV A V+
Sbjct: 41 PSAIQICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERT 100
Query: 60 QFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKE 119
F +G+V + A++T S+E+ + VM +++LTG +KL + A +V
Sbjct: 101 DFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP------ 154
Query: 120 KIHLKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEGAV 176
+ LK V + E V ++ + + R ++E M+ + D++ + E V
Sbjct: 155 -LSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTV 213
Query: 177 STRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFR 236
S +S+ I LV P HG GG M M+ VA I A+R C + SVD F
Sbjct: 214 SYSQSSL--IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH 271
Query: 237 GPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKEN 296
G + + + T +E+ V V+A + ++ R R SAF Y + +
Sbjct: 272 DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQEGR 330
Query: 297 LITFPRIQPISKDDFRRY 314
+ P++ P ++D+ +R+
Sbjct: 331 SLPVPQLVPETEDEKKRF 348
Score = 59.7 bits (143), Expect = 7e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 4 PAPGEVVMSQA-----IQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDD 58
P P V SQ+ + P+ T G + G +K +D A + A +H + VTASVD
Sbjct: 208 PEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDA 267
Query: 59 IQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGK 118
I F + R G VITI ++T + SMEI + V ++ +K A + F + +
Sbjct: 268 INFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQ 327
Query: 119 EKIHLKPVTLLTEQD 133
E L L+ E +
Sbjct: 328 EGRSLPVPQLVPETE 342
>gi|32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
Length = 329
Score = 89.4 bits (220), Expect = 8e-18
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 19/313 (6%)
Query: 11 MSQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVDDIQFEET 64
+S+ ++P A G + G +LK I+ + + +H G CV A V+ F
Sbjct: 5 LSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSP 64
Query: 65 ARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLK 124
+G+V + A++T S+E+ + VM +++LTG +KL + A +V + LK
Sbjct: 65 MCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP-------LSLK 117
Query: 125 PVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEGAVSTRGT 181
V + E V ++ + + R ++E M+ + D++ + E VS +
Sbjct: 118 NVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQS 177
Query: 182 SVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTV 241
S+ I LV P HG GG M M+ VA I A+R C + SVD F
Sbjct: 178 SL--IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRK 235
Query: 242 GDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFP 301
G + + + T +E+ V V+A + ++ R R SAF Y + + + P
Sbjct: 236 GCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQEGRSLPVP 294
Query: 302 RIQPISKDDFRRY 314
++ P ++D+ +R+
Sbjct: 295 QLVPETEDEKKRF 307
Score = 59.7 bits (143), Expect = 7e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 4 PAPGEVVMSQA-----IQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDD 58
P P V SQ+ + P+ T G + G +K +D A + A +H + VTASVD
Sbjct: 167 PEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDA 226
Query: 59 IQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGK 118
I F + R G VITI ++T + SMEI + V ++ +K A + F + +
Sbjct: 227 INFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQ 286
Query: 119 EKIHLKPVTLLTEQD 133
E L L+ E +
Sbjct: 287 EGRSLPVPQLVPETE 301
Score = 33.1 bits (74), Expect = 0.68
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 184 QSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAH------PFLKSVDMFKFRG 237
Q ++ P AN GN GG I+ +E I ++R C + L V+ F
Sbjct: 4 QLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS 63
Query: 238 PSTVGDRLVFTAIVNNTFQTCVEVGVRV 265
P +G+ +A + T + VEV V V
Sbjct: 64 PMCIGEVAHVSAEITYTSKHSVEVQVNV 91
>gi|32528284 acyl-CoA thioesterase 7 isoform hBACHc [Homo sapiens]
Length = 350
Score = 88.6 bits (218), Expect = 1e-17
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 19/311 (6%)
Query: 13 QAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA----GVSCVTA--SVDDIQFEETAR 66
Q ++P A G + G +LK I+ + + +H G CV A V+ F
Sbjct: 28 QIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMC 87
Query: 67 VGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPV 126
+G+V + A++T S+E+ + VM +++LTG +KL + A +V + LK V
Sbjct: 88 IGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVP-------LSLKNV 140
Query: 127 TLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMKESSKFDDLI---FDEEEGAVSTRGTSV 183
+ E V ++ + + R ++E M+ + D++ + E VS +S+
Sbjct: 141 DKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSL 200
Query: 184 QSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGD 243
I LV P HG GG M M+ VA I A+R C + SVD F G
Sbjct: 201 --IHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGC 258
Query: 244 RLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNAADDKENLITFPRI 303
+ + + T +E+ V V+A + ++ R R SAF Y + + + P++
Sbjct: 259 VITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYR-AASAFFTYVSLSQEGRSLPVPQL 317
Query: 304 QPISKDDFRRY 314
P ++D+ +R+
Sbjct: 318 VPETEDEKKRF 328
Score = 59.7 bits (143), Expect = 7e-09
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 4 PAPGEVVMSQA-----IQPAHATARGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDD 58
P P V SQ+ + P+ T G + G +K +D A + A +H + VTASVD
Sbjct: 188 PEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDA 247
Query: 59 IQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGK 118
I F + R G VITI ++T + SMEI + V ++ +K A + F + +
Sbjct: 248 INFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQ 307
Query: 119 EKIHLKPVTLLTEQD 133
E L L+ E +
Sbjct: 308 EGRSLPVPQLVPETE 322
>gi|81295407 acyl-Coenzyme A thioesterase 2, mitochondrial isoform a
[Homo sapiens]
Length = 448
Score = 47.0 bits (110), Expect = 5e-05
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 48/322 (14%)
Query: 15 IQPAHATARGELSAGQLLKWIDTTACLAAEKH--------AGVSCVTASVDDIQF-EETA 65
++ + T + + G++L+ +D+ L H + +S VTA VD I +++
Sbjct: 109 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 168
Query: 66 RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125
Q I V+ TSME+ +++ L G ++ V +TFV E
Sbjct: 169 SPEQDIKFSGHVSWVGKTSMEVKMQMF---QLHG-DEFCPVLDATFVMVARDSENKGPAF 224
Query: 126 VTLLTEQDHVEHNL-------------------------AAERRKVRLQHEDTFNNLMKE 160
V L + E L A ER + HE + L +
Sbjct: 225 VNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTI---HEMFLSTLDPK 281
Query: 161 SSKFDDLIFDEEEGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRL 220
+ F + AV + ++S+E+ P N FGG +M +A +A
Sbjct: 282 TISFRSRVLPSN--AVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSF 339
Query: 221 CWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRH 280
+ PF+ +VD F+ P VG L ++ V T ++V V E QE +H
Sbjct: 340 GGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRVHSEVASLQE-----KQH 394
Query: 281 INSAFLIYNAADDKENLITFPR 302
+ + +KE + FP+
Sbjct: 395 TTTNVFHFTFMSEKEVPLVFPK 416
>gi|81295404 acyl-Coenzyme A thioesterase 2, mitochondrial isoform b
[Homo sapiens]
Length = 439
Score = 47.0 bits (110), Expect = 5e-05
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 48/322 (14%)
Query: 15 IQPAHATARGELSAGQLLKWIDTTACLAAEKH--------AGVSCVTASVDDIQF-EETA 65
++ + T + + G++L+ +D+ L H + +S VTA VD I +++
Sbjct: 100 LREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSL 159
Query: 66 RVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKP 125
Q I V+ TSME+ +++ L G ++ V +TFV E
Sbjct: 160 SPEQDIKFSGHVSWVGKTSMEVKMQMF---QLHG-DEFCPVLDATFVMVARDSENKGPAF 215
Query: 126 VTLLTEQDHVEHNL-------------------------AAERRKVRLQHEDTFNNLMKE 160
V L + E L A ER + HE + L +
Sbjct: 216 VNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTI---HEMFLSTLDPK 272
Query: 161 SSKFDDLIFDEEEGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRL 220
+ F + AV + ++S+E+ P N FGG +M +A +A
Sbjct: 273 TISFRSRVLPSN--AVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSF 330
Query: 221 CWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRH 280
+ PF+ +VD F+ P VG L ++ V T ++V V E QE +H
Sbjct: 331 GGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRVHSEVASLQE-----KQH 385
Query: 281 INSAFLIYNAADDKENLITFPR 302
+ + +KE + FP+
Sbjct: 386 TTTNVFHFTFMSEKEVPLVFPK 407
>gi|116812600 START domain containing 10 [Homo sapiens]
Length = 291
Score = 45.8 bits (107), Expect = 1e-04
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 15/154 (9%)
Query: 399 PAHLAYRLLSDFTKRPLWDPHFVSCEVID----WVSEDDQLYHITCPILNDDKPKDLVVL 454
PA Y +L D R WD + + E D V+ D Y CP KP +
Sbjct: 78 PAETLYDVLHDIEYRKKWDSNVI--ETFDIARLTVNADVGYYSWRCP-----KPLKNRDV 130
Query: 455 VSRRKPLKDGNTYTVAVKSVILPSVPPSPQYIRSEIICAGFLIHAIDSNSCIVSYFNHMS 514
++ R L G Y + SV P PP +R+ I G+LI + SC+++Y +
Sbjct: 131 ITLRSWLPMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQSTGPKSCVITYLAQVD 190
Query: 515 -ASILPYFAGNLGGW---SKSIEETAASCIQFLE 544
LP + N K++++ +C+++ E
Sbjct: 191 PKGSLPKWVVNKSSQFLAPKAMKKMYKACLKYPE 224
>gi|21040261 START domain containing protein 6 [Homo sapiens]
Length = 220
Score = 37.7 bits (86), Expect = 0.028
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 367 GWEVTSTVEKIKIYTLEE---HDVLSVWVEKHVGSPAHLAYRLLSDFTKRPLWDPHFVSC 423
GW+V T +KI + + H L SPA L+ L R WD
Sbjct: 23 GWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAKLS-DFLYQTGDRITWDKSLQVY 81
Query: 424 EVIDWVSEDDQLYHITCP--ILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPP 481
++ + D + H + P+D + LV ++ +GN ++ KSV P PP
Sbjct: 82 NMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKR--YEGNMNIISSKSVDFPEYPP 139
Query: 482 SPQYIRSEIICAGFLIHAIDSN 503
S YIR GF+ ++ N
Sbjct: 140 SSNYIRGYNHPCGFVCSPMEEN 161
>gi|215820652 StAR-related lipid transfer (START) domain containing
8 isoform b [Homo sapiens]
Length = 1023
Score = 33.5 bits (75), Expect = 0.52
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 353 DSNVEALKKLAAKR--GWEVTSTVEKIKIYTLEEHD--VLSVWVEKH--VGSPAHLAYRL 406
+ N++ L + AA+R GW + ++ + D L +W PA + +R+
Sbjct: 821 EENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRV 880
Query: 407 LSDFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNT 466
L + R LWD + +V++ + +LYH + +D VVL R L G
Sbjct: 881 LRE---RALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGG- 936
Query: 467 YTVAVKSVILPSVPPSPQYIRSEIICAGFLI 497
+ V + P P +R+ ++ + +L+
Sbjct: 937 -CLLVSQSLDPEQPVPESGVRALMLTSQYLM 966
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 33.5 bits (75), Expect = 0.52
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 353 DSNVEALKKLAAKR--GWEVTSTVEKIKIYTLEEHD--VLSVWVEKH--VGSPAHLAYRL 406
+ N++ L + AA+R GW + ++ + D L +W PA + +R+
Sbjct: 901 EENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRV 960
Query: 407 LSDFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNT 466
L + R LWD + +V++ + +LYH + +D VVL R L G
Sbjct: 961 LRE---RALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGG- 1016
Query: 467 YTVAVKSVILPSVPPSPQYIRSEIICAGFLI 497
+ V + P P +R+ ++ + +L+
Sbjct: 1017 -CLLVSQSLDPEQPVPESGVRALMLTSQYLM 1046
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 33.5 bits (75), Expect = 0.52
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 353 DSNVEALKKLAAKR--GWEVTSTVEKIKIYTLEEHD--VLSVWVEKH--VGSPAHLAYRL 406
+ N++ L + AA+R GW + ++ + D L +W PA + +R+
Sbjct: 821 EENIQDLLRDAAERFKGWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRV 880
Query: 407 LSDFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDGNT 466
L + R LWD + +V++ + +LYH + +D VVL R L G
Sbjct: 881 LRE---RALWDEDLLRAQVLEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGG- 936
Query: 467 YTVAVKSVILPSVPPSPQYIRSEIICAGFLI 497
+ V + P P +R+ ++ + +L+
Sbjct: 937 -CLLVSQSLDPEQPVPESGVRALMLTSQYLM 966
>gi|151301035 START domain containing 7 [Homo sapiens]
Length = 370
Score = 32.7 bits (73), Expect = 0.89
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 409 DFTKRPLWDPHFVSCEVI--DWVSEDDQLY---HITCPILNDDKPKDLVVLVSRRKPLKD 463
D R WD + EVI D VS + L+ H P+ + D V V R ++
Sbjct: 185 DTEYRKKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRD-----YVYVRRYSVDQE 239
Query: 464 GNTYTVAVKSVILPSVPPSPQYIR 487
N + ++V PSVP SP+++R
Sbjct: 240 NNMMVLVSRAVEHPSVPESPEFVR 263
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.8 bits (68), Expect = 3.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 417 DPHFVSCEVIDWVSEDDQLYHITCPILNDDK-----PKDLVVLVSRRKPLKDGNTYTVAV 471
D + ++D VSE+ + H+T I N + LV + K L+D NTYT+ +
Sbjct: 4433 DGPMIHTPLVDTVSEEGDIVHLTTSITNAKEVNWYFENKLVPSDEKFKCLQDQNTYTLVI 4492
Query: 472 KSV 474
V
Sbjct: 4493 DKV 4495
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.8 bits (68), Expect = 3.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 417 DPHFVSCEVIDWVSEDDQLYHITCPILNDDK-----PKDLVVLVSRRKPLKDGNTYTVAV 471
D + ++D VSE+ + H+T I N + LV + K L+D NTYT+ +
Sbjct: 4366 DGPMIHTPLVDTVSEEGDIVHLTTSITNAKEVNWYFENKLVPSDEKFKCLQDQNTYTLVI 4425
Query: 472 KSV 474
V
Sbjct: 4426 DKV 4428
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.8 bits (68), Expect = 3.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 417 DPHFVSCEVIDWVSEDDQLYHITCPILNDDK-----PKDLVVLVSRRKPLKDGNTYTVAV 471
D + ++D VSE+ + H+T I N + LV + K L+D NTYT+ +
Sbjct: 4241 DGPMIHTPLVDTVSEEGDIVHLTTSITNAKEVNWYFENKLVPSDEKFKCLQDQNTYTLVI 4300
Query: 472 KSV 474
V
Sbjct: 4301 DKV 4303
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 30.4 bits (67), Expect = 4.4
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 356 VEALKKLAAKR--GWEVTSTVEK--IKIYTLEEHDVLSVW---VEKHVGSPAHLAYRLLS 408
++ L+K A ++ GW S+ + + + + + L +W VE P+ + R+L
Sbjct: 906 IQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEA-PPSVVLNRVLR 964
Query: 409 DFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDG 464
+ R LWD FV +V++ + ++Y + +D VVL + + L G
Sbjct: 965 E---RHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKG 1017
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 30.4 bits (67), Expect = 4.4
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 356 VEALKKLAAKR--GWEVTSTVEK--IKIYTLEEHDVLSVW---VEKHVGSPAHLAYRLLS 408
++ L+K A ++ GW S+ + + + + + L +W VE P+ + R+L
Sbjct: 796 IQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEA-PPSVVLNRVLR 854
Query: 409 DFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDG 464
+ R LWD FV +V++ + ++Y + +D VVL + + L G
Sbjct: 855 E---RHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKG 907
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 30.4 bits (67), Expect = 4.4
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 356 VEALKKLAAKR--GWEVTSTVEK--IKIYTLEEHDVLSVW---VEKHVGSPAHLAYRLLS 408
++ L+K A ++ GW S+ + + + + + L +W VE P+ + R+L
Sbjct: 914 IQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEA-PPSVVLNRVLR 972
Query: 409 DFTKRPLWDPHFVSCEVIDWVSEDDQLYHITCPILNDDKPKDLVVLVSRRKPLKDG 464
+ R LWD FV +V++ + ++Y + +D VVL + + L G
Sbjct: 973 E---RHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKG 1025
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 30.4 bits (67), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 437 HITCPILNDDKPKDLVVLVSRRKPLKDGNTYTVAVKSVILPSVPPSP 483
H + + + +P+ V + RR+ LK NT +V I S PP+P
Sbjct: 1145 HKSTALPEEKRPETAVSRLERREQLKKANTLPTSVTVEISDSAPPAP 1191
>gi|11968009 SIL1 protein precursor [Homo sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 123 LKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMK 159
L+P + HV NL R+ +LQ+ED F N +K
Sbjct: 79 LQPGQAVPAGSHVRLNLQTGEREAKLQYEDKFRNNLK 115
>gi|83641896 SIL1 protein precursor [Homo sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 123 LKPVTLLTEQDHVEHNLAAERRKVRLQHEDTFNNLMK 159
L+P + HV NL R+ +LQ+ED F N +K
Sbjct: 79 LQPGQAVPAGSHVRLNLQTGEREAKLQYEDKFRNNLK 115
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 1581 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 1628
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 245 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 292
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 248 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 295
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 1466 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 1513
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 1585 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 1632
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 82 STSMEISIKVMVQDMLTGIEKLVSVAFSTFVAKPVGKEKIHLKPVTLLTE 131
+T ME++ + V+ M + ++ VA+ K + K+K+HLK +T + E
Sbjct: 1466 ATDMELTKRSAVEGMPSNLDS--EVAWGKATQKEIEKQKVHLKSITEVGE 1513
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,833,387
Number of Sequences: 37866
Number of extensions: 872940
Number of successful extensions: 1992
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1935
Number of HSP's gapped (non-prelim): 51
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.