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Search of human proteins with 18129632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18129632 sterile alpha motif domain containing 10 [Homo
sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18129632 sterile alpha motif domain containing 10 [Homo sapiens] 411 e-115
gi|156119597 sterile alpha motif domain containing 12 isoform a ... 130 8e-31
gi|156119595 sterile alpha motif domain containing 12 isoform b ... 127 5e-30
gi|93204861 protein phosphatase 1, regulatory (inhibitor) subuni... 40 0.001
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 36 0.019
gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Ho... 36 0.019
gi|25777596 diacylglycerol kinase, delta 130kDa isoform 1 [Homo ... 35 0.033
gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo ... 35 0.033
gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens] 35 0.043
gi|126032345 sterile alpha motif domain containing 3 isoform b [... 34 0.097
gi|126032305 sterile alpha motif domain containing 3 isoform a [... 34 0.097
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca... 33 0.16
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca... 33 0.16
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca... 33 0.16
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal... 33 0.16
gi|170784854 PTPRF interacting protein, binding protein 2 (lipri... 33 0.16
gi|82880648 MLK-related kinase isoform 1 [Homo sapiens] 33 0.22
gi|189571685 WD repeat, sterile alpha motif and U-box domain con... 33 0.22
gi|189571683 WD repeat, sterile alpha motif and U-box domain con... 33 0.22
gi|189571681 WD repeat, sterile alpha motif and U-box domain con... 33 0.22
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 33 0.22
gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens] 32 0.28
gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens] 32 0.28
gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens] 32 0.28
gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens] 32 0.28
gi|154090976 sterile alpha and TIR motif containing 1 [Homo sapi... 32 0.28
gi|5174669 sex comb on midleg-like 2 [Homo sapiens] 32 0.48
gi|158508495 sex comb on midleg-like 4 [Homo sapiens] 31 0.82
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 31 0.82
gi|29294627 PTPRF interacting protein binding protein 1 isoform ... 30 1.8
>gi|18129632 sterile alpha motif domain containing 10 [Homo sapiens]
Length = 202
Score = 411 bits (1057), Expect = e-115
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MFTELRSKLSPPRGRAGAVRAGFGERRDVDATAHFSFCRTLLEHTVSAESIPCHLPRTPG 60
MFTELRSKLSPPRGRAGAVRAGFGERRDVDATAHFSFCRTLLEHTVSAESIPCHLPRTPG
Sbjct: 1 MFTELRSKLSPPRGRAGAVRAGFGERRDVDATAHFSFCRTLLEHTVSAESIPCHLPRTPG 60
Query: 61 TSLTWHDSRSQRAASSRPIKLLQQPGTDTPQGRLYSDHYGLYHTSPSLGGLTRPVVLWSQ 120
TSLTWHDSRSQRAASSRPIKLLQQPGTDTPQGRLYSDHYGLYHTSPSLGGLTRPVVLWSQ
Sbjct: 61 TSLTWHDSRSQRAASSRPIKLLQQPGTDTPQGRLYSDHYGLYHTSPSLGGLTRPVVLWSQ 120
Query: 121 QDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQVLR 180
QDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQVLR
Sbjct: 121 QDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQVLR 180
Query: 181 LQVREEGRSLQLLSQASFGKMS 202
LQVREEGRSLQLLSQASFGKMS
Sbjct: 181 LQVREEGRSLQLLSQASFGKMS 202
>gi|156119597 sterile alpha motif domain containing 12 isoform a
[Homo sapiens]
Length = 161
Score = 130 bits (327), Expect = 8e-31
Identities = 61/87 (70%), Positives = 75/87 (86%)
Query: 111 LTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQ 170
L++PV LW+QQDVCKWLKKHCP+ Y +Y E+F QH ITGRALLRL +KL+RMG+AQE
Sbjct: 70 LSKPVALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLERMGIAQENL 129
Query: 171 RQEVLQQVLRLQVREEGRSLQLLSQAS 197
RQ +LQQVL+L+VREE R+LQLL+QAS
Sbjct: 130 RQHILQQVLQLKVREEVRNLQLLTQAS 156
>gi|156119595 sterile alpha motif domain containing 12 isoform b
[Homo sapiens]
Length = 201
Score = 127 bits (320), Expect = 5e-30
Identities = 59/87 (67%), Positives = 74/87 (85%)
Query: 111 LTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQ 170
L++PV LW+QQDVCKWLKKHCP+ Y +Y E+F QH ITGRALLRL +KL+RMG+AQE
Sbjct: 70 LSKPVALWTQQDVCKWLKKHCPNQYQIYSESFKQHDITGRALLRLTDKKLERMGIAQENL 129
Query: 171 RQEVLQQVLRLQVREEGRSLQLLSQAS 197
RQ +LQQVL+L+VREE R+LQLL+Q +
Sbjct: 130 RQHILQQVLQLKVREEVRNLQLLTQGT 156
>gi|93204861 protein phosphatase 1, regulatory (inhibitor) subunit 9A
[Homo sapiens]
Length = 1098
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 113 RPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQ 172
R V WS Q V WL N YV FS ITG LL+L+ KL+ +G+ R
Sbjct: 983 RAVQEWSVQQVSHWLMSL---NLEQYVSEFSAQNITGEQLLQLDGNKLKALGMTASQDRA 1039
Query: 173 EVLQQVLRLQVR-EEGRSLQ 191
V +++ +++ E+ R Q
Sbjct: 1040 VVKKKLKEMKMSLEKARKAQ 1059
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 36.2 bits (82), Expect = 0.019
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 112 TRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQR 171
T+PV LW++ DV WL+ N + EAF + I G L L E L +G+ + R
Sbjct: 1780 TKPVHLWTKPDVADWLES---LNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHR 1836
Query: 172 QEV---LQQVL 179
+ L+Q+L
Sbjct: 1837 MNIERALKQLL 1847
>gi|41393057 connector enhancer of kinase suppressor of Ras 2 [Homo
sapiens]
Length = 1034
Score = 36.2 bits (82), Expect = 0.019
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 111 LTRPVVLWSQQDVCKWLK--KHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQE 168
+ PV WS V W+K C Y ++ F + I+G LLR+ ++L+ +G+++
Sbjct: 4 IMEPVSKWSPSQVVDWMKGLDDCLQQY---IKNFEREKISGDQLLRITHQELEDLGVSRI 60
Query: 169 AQRQEVLQQV 178
++ +L+ V
Sbjct: 61 GHQELILEAV 70
>gi|25777596 diacylglycerol kinase, delta 130kDa isoform 1 [Homo
sapiens]
Length = 1170
Score = 35.4 bits (80), Expect = 0.033
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 111 LTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQ 170
L PV LW ++V WL+ + Y + F++H I G LL L L+ +G+ +
Sbjct: 1094 LGAPVHLWGTEEVAAWLEH---LSLCEYKDIFTRHDIRGSELLHLERRDLKDLGVTKVGH 1150
Query: 171 RQEVL 175
+ +L
Sbjct: 1151 MKRIL 1155
>gi|25777598 diacylglycerol kinase, delta 130kDa isoform 2 [Homo
sapiens]
Length = 1214
Score = 35.4 bits (80), Expect = 0.033
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 111 LTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQ 170
L PV LW ++V WL+ + Y + F++H I G LL L L+ +G+ +
Sbjct: 1138 LGAPVHLWGTEEVAAWLEH---LSLCEYKDIFTRHDIRGSELLHLERRDLKDLGVTKVGH 1194
Query: 171 RQEVL 175
+ +L
Sbjct: 1195 MKRIL 1199
>gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens]
Length = 1220
Score = 35.0 bits (79), Expect = 0.043
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 112 TRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQR 171
++PV W ++V WL N Y + F +H I G LL L L+ +G+ +
Sbjct: 1145 SQPVQKWGTEEVAAWLDL---LNLGEYKDIFIRHDIRGAELLHLERRDLKDLGIPKVGHV 1201
Query: 172 QEVLQQVLRLQVREEGRS 189
+ +LQ ++E GRS
Sbjct: 1202 KRILQ-----GIKELGRS 1214
>gi|126032345 sterile alpha motif domain containing 3 isoform b
[Homo sapiens]
Length = 221
Score = 33.9 bits (76), Expect = 0.097
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQ 177
WS + VC WL + N V F + ++G ALL LN +Q+ L ++ Q VL
Sbjct: 4 WSVEQVCSWLVE---KNLGELVHRFQEEEVSGAALLALNDRMVQQ--LVKKIGHQAVLMD 58
Query: 178 VLR 180
+++
Sbjct: 59 LIK 61
>gi|126032305 sterile alpha motif domain containing 3 isoform a
[Homo sapiens]
Length = 520
Score = 33.9 bits (76), Expect = 0.097
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQ 177
WS + VC WL + N V F + ++G ALL LN +Q+ L ++ Q VL
Sbjct: 4 WSVEQVCSWLVE---KNLGELVHRFQEEEVSGAALLALNDRMVQQ--LVKKIGHQAVLMD 58
Query: 178 VLR 180
+++
Sbjct: 59 LIK 61
>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 1 [Homo sapiens]
Length = 1075
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 42 LEHTVSAESIPCHLPRTPGTSLTWHDSRSQRAASSRP 78
L H++S PCH PR+ T W R SSRP
Sbjct: 231 LGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRP 267
>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 4 [Homo sapiens]
Length = 1045
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 42 LEHTVSAESIPCHLPRTPGTSLTWHDSRSQRAASSRP 78
L H++S PCH PR+ T W R SSRP
Sbjct: 231 LGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRP 267
>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 3 [Homo sapiens]
Length = 1065
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 42 LEHTVSAESIPCHLPRTPGTSLTWHDSRSQRAASSRP 78
L H++S PCH PR+ T W R SSRP
Sbjct: 231 LGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRP 267
>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 2 [Homo sapiens]
Length = 1068
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 42 LEHTVSAESIPCHLPRTPGTSLTWHDSRSQRAASSRP 78
L H++S PCH PR+ T W R SSRP
Sbjct: 231 LGHSLSPRQSPCHSPRSSVTDENWLSPRPASGPSSRP 267
>gi|170784854 PTPRF interacting protein, binding protein 2 (liprin
beta 2) [Homo sapiens]
Length = 876
Score = 33.1 bits (74), Expect = 0.16
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 114 PVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQR-MGLAQEAQRQ 172
P WS + VC WL+ Y+++ Q +G LL + +++ +G+ R+
Sbjct: 554 PFAQWSTERVCAWLEDFGLAQYVIFAR---QWVSSGHTLLTATPQDMEKELGIKHPLHRK 610
Query: 173 EVLQQVLRLQVREEGRSLQL 192
+++ V + ++E +S L
Sbjct: 611 KLVLAVKAINTKQEEKSALL 630
>gi|82880648 MLK-related kinase isoform 1 [Homo sapiens]
Length = 800
Score = 32.7 bits (73), Expect = 0.22
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 118 WSQQDVCKWL-----KKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQE 168
W++ DV W+ K VY F ++ ITG+ LL L E L+ MG+ +
Sbjct: 339 WTEDDVYCWVQQLVRKGDSSAEMSVYASLFKENNITGKRLLLLEEEDLKDMGIVSK 394
>gi|189571685 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 32.7 bits (73), Expect = 0.22
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAE------KLQRMGLAQEAQR 171
WS++DV WL C + V F + I G+ LL L E K++ +GL R
Sbjct: 332 WSEEDVSTWL---CAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGL-----R 383
Query: 172 QEVLQQVLRLQVREEGRS 189
+VL+++ L+ + + S
Sbjct: 384 SKVLRKIEELRTKVKSLS 401
>gi|189571683 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 32.7 bits (73), Expect = 0.22
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAE------KLQRMGLAQEAQR 171
WS++DV WL C + V F + I G+ LL L E K++ +GL R
Sbjct: 332 WSEEDVSTWL---CAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGL-----R 383
Query: 172 QEVLQQVLRLQVREEGRS 189
+VL+++ L+ + + S
Sbjct: 384 SKVLRKIEELRTKVKSLS 401
>gi|189571681 WD repeat, sterile alpha motif and U-box domain
containing 1 [Homo sapiens]
Length = 476
Score = 32.7 bits (73), Expect = 0.22
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAE------KLQRMGLAQEAQR 171
WS++DV WL C + V F + I G+ LL L E K++ +GL R
Sbjct: 332 WSEEDVSTWL---CAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGL-----R 383
Query: 172 QEVLQQVLRLQVREEGRS 189
+VL+++ L+ + + S
Sbjct: 384 SKVLRKIEELRTKVKSLS 401
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQRMGLAQEAQRQEVLQQ 177
W ++V +W+ + + Y E F + I+GR L+ +N L +MG+ + + +
Sbjct: 545 WDPEEVAEWISQL---GFPQYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISRH 601
Query: 178 VLRLQVREE 186
L EE
Sbjct: 602 TQELLEIEE 610
>gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
Length = 329
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 109 GGLTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKL 160
G +T+ WS + V +LK+ P V+ F H I G+ALL L ++ L
Sbjct: 249 GSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 300
>gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 109 GGLTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKL 160
G +T+ WS + V +LK+ P V+ F H I G+ALL L ++ L
Sbjct: 128 GSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 179
>gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]
Length = 208
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 109 GGLTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKL 160
G +T+ WS + V +LK+ P V+ F H I G+ALL L ++ L
Sbjct: 128 GSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 179
>gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]
Length = 302
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 109 GGLTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKL 160
G +T+ WS + V +LK+ P V+ F H I G+ALL L ++ L
Sbjct: 222 GSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVL 273
>gi|154090976 sterile alpha and TIR motif containing 1 [Homo
sapiens]
Length = 724
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQR-MGLAQEAQRQEVLQ 176
W + +V WL++ + Y E+F + + G LLRL E+LQ +G+ R+ +
Sbjct: 412 WKEAEVQTWLQQI---GFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFR 468
Query: 177 QVLRLQ 182
++ L+
Sbjct: 469 ELTELK 474
>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
Length = 700
Score = 31.6 bits (70), Expect = 0.48
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 53 CHLPRTPGTSLTWHDSRSQRAASSRPIKLLQQPGTDTPQGRLYSDHYGLYHTS--PSLGG 110
C P TS++ SRS +S P+ G +P+ + + + S PS
Sbjct: 559 CRNPMYIHTSVSQDFSRSVPGTTSSPLV-----GDISPKSSPHEVKFQMQRKSEAPSYIA 613
Query: 111 LTRPVVL----------WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKL 160
+ P VL WS +V +++K P + F QH I G+AL L ++ +
Sbjct: 614 VPDPSVLKQGFSKDPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEIDGKALFLLKSDVM 673
Query: 161 QR-MGL 165
+ MGL
Sbjct: 674 MKYMGL 679
>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
Length = 414
Score = 30.8 bits (68), Expect = 0.82
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 118 WSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQR 162
W+ +DV ++K P +VE F +H I G ALL L ++ + +
Sbjct: 346 WTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMK 390
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 30.8 bits (68), Expect = 0.82
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 30 DATAHFSFCRTLLEHTVSAESIPCHLPRTPGTSLTWHDSRSQRAASSRP 78
DA + C+ L E +S +S P LPR G L H R A++ P
Sbjct: 1393 DARPFNALCKRLSEDGISRKSFPWRLPRGNGLVLPPHKERPYTIAAALP 1441
>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
[Homo sapiens]
Length = 1005
Score = 29.6 bits (65), Expect = 1.8
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 111 LTRPVVLWSQQDVCKWLKKHCPHNYLVYVEAFSQHAITGRALLRLNAEKLQR-MGLAQEA 169
L P W+++ VC WL + +YL + +G+ LL+ + + L++ +G+
Sbjct: 634 LDMPFAKWTKEQVCNWLMEQGLGSYL---NSGKHWIASGQTLLQASQQDLEKELGIKHSL 690
Query: 170 QRQEVLQQVLRLQVREE 186
R+++ + L EE
Sbjct: 691 HRKKLQLALQALGSEEE 707
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,918,333
Number of Sequences: 37866
Number of extensions: 354306
Number of successful extensions: 1119
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1092
Number of HSP's gapped (non-prelim): 54
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.