Guide to the Human Genome
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Name: CDKN2AIPNL Sequence: fasta or formatted (116aa) NCBI GI: 18087821
Description:

CDKN2A interacting protein N-terminal like

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         10           4
 C cysteine            0.9          1           1
 D aspartate           7.8          9           1
 E glutamate           9.5         11           2
 F phenylalanine       4.3          5           1
 G glycine             6.0          7           2
 H histidine           2.6          3           1
 I isoleucine          1.7          2           1
 K lysine              5.2          6           2
 L leucine            11.2         13           2
 M methionine          5.2          6           1
 N asparagine          1.7          2           1
 P proline             3.4          4           2
 Q glutamine           5.2          6           1
 R arginine            6.0          7           1
 S serine              8.6         10           1
 T threonine           1.7          2           2
 V valine              6.0          7           1
 W tryptophan          1.7          2           1
 Y tyrosine            2.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDKN2A interacting protein N-terminal like 
CDKN2AIP              0.295   CDKN2A interacting protein 
ZNF594                0.010   zinc finger protein 594 
PLEKHA7               0.010   pleckstrin homology domain containing, family A mem...
HLA-F                 0.010   major histocompatibility complex, class I, F isofor...
HLA-F                 0.010   major histocompatibility complex, class I, F isofor...
HLA-F                 0.005   major histocompatibility complex, class I, F isofor...
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.005   Rho/Rac guanine nucleotide exchange factor 18 isofor...
LRRC27                0.005   leucine rich repeat containing 27 isoform c 
LRRC27                0.005   leucine rich repeat containing 27 isoform b 
LRRC27                0.005   leucine rich repeat containing 27 isoform a 
LRRC27                0.005   leucine rich repeat containing 27 isoform a 
DLG5                  0.005   discs large homolog 5 
NKRF                  0.005   transcription factor NRF 
RTEL1                 0.005   regulator of telomere elongation helicase 1 isoform ...
RTEL1                 0.005   regulator of telomere elongation helicase 1 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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