Guide to the Human Genome
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Search of human proteins with 178057341

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
[Homo sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   343   5e-95
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   328   1e-90
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   327   2e-90
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         327   2e-90
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   327   2e-90
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 293   3e-80
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   271   2e-73
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   270   3e-73
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    270   3e-73
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   270   3e-73
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             268   1e-72
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   268   1e-72
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              268   1e-72
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   268   1e-72
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              268   1e-72
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             256   5e-69
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             256   5e-69
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             256   5e-69
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   252   9e-68
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   252   9e-68
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   252   9e-68
gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   249   1e-66
gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   249   1e-66
gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   249   1e-66
gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]             243   4e-65
gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]             243   4e-65
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]        237   4e-63
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             229   6e-61
gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]             229   6e-61
gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]             229   6e-61

>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  343 bits (879), Expect = 5e-95
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
Sbjct: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
Sbjct: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164
           WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  328 bits (841), Expect = 1e-90
 Identities = 157/164 (95%), Positives = 159/164 (96%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVNSV+FF+IT DGKPLGRISIK FADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT PNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFIC AKTE
Sbjct: 61  MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164
           WLDGKHVAFGKVKERVNIVEA EHFGYRNSKTSKKITIADCGQF
Sbjct: 121 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF 164


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  327 bits (839), Expect = 2e-90
 Identities = 158/164 (96%), Positives = 159/164 (96%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVNSV+FFDITVDGKPLGRISIK FADKI KTAENFRALSTGEKGFRYKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT  NGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164
           WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  327 bits (839), Expect = 2e-90
 Identities = 158/164 (96%), Positives = 159/164 (96%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVNSV+FFDITVDGKPLGRISIK FADKI KTAENFRALSTGEKGFRYKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT  NGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164
           WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  327 bits (839), Expect = 2e-90
 Identities = 158/164 (96%), Positives = 159/164 (96%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVNSV+FFDITVDGKPLGRISIK FADKI KTAENFRALSTGEKGFRYKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT  NGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164
           WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 164


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  293 bits (751), Expect = 3e-80
 Identities = 139/163 (85%), Positives = 146/163 (89%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FFDI VDG+PLGR+S + FADK+PKTAENFRALSTGEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT  NGTG KSIYGEKF+DEN I KHTG GILSMANAGPNTNGSQFFICTAKTE
Sbjct: 61  MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  271 bits (692), Expect = 2e-73
 Identities = 130/163 (79%), Positives = 139/163 (85%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FFDI+V GKPLG +S + FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT+ NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFICTAKTE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  270 bits (691), Expect = 3e-73
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FF I+VDG+ LGRIS + FADK PKTAENF AL+TGEKGF YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NGTG KSIYGEK DD+N I KHTG GILSMANAGPNTNGSQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLD KHV  GKVKE +NIVEAMEHFG RN KTSKK+TI D GQ
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQ 163


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (691), Expect = 3e-73
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FF I+VDG+ LGRIS + FADK PKTAENF AL+TGEKGF YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NGTG KSIYGEK DD+N I KHTG GILSMANAGPNTNGSQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLD KHV  GKVKE +NIVEAMEHFG RN KTSKK+TI D GQ
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQ 163


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (691), Expect = 3e-73
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FF I+VDG+ LGRIS + FADK PKTAENF AL+TGEKGF YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NGTG KSIYGEK DD+N I KHTG GILSMANAGPNTNGSQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLD KHV  GKVKE +NIVEAMEHFG RN KTSKK+TI D GQ
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQ 163


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  268 bits (686), Expect = 1e-72
 Identities = 128/158 (81%), Positives = 133/158 (84%)

Query: 6   IFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGG 65
           +FFDIT++ KPLG +S K FADK PKTAENF ALSTGEKGF YK SCFHRIIPGFMCQGG
Sbjct: 9   VFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQGG 68

Query: 66  DFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGK 125
           DFTH NGTG KSIYGEKFDDEN I KHTG GI SMANAGPNTNGSQF  CTAKT WLDG 
Sbjct: 69  DFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLDGM 128

Query: 126 HVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           HV  GKVKE +NI EAME FG RN KTSKKITIADCGQ
Sbjct: 129 HVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQ 166


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  268 bits (686), Expect = 1e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FFDI+V GKPLG +S + FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT+ NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  268 bits (686), Expect = 1e-72
 Identities = 128/158 (81%), Positives = 133/158 (84%)

Query: 6   IFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGG 65
           +FFDIT++ KPLG +S K FADK PKTAENF ALSTGEKGF YK SCFHRIIPGFMCQGG
Sbjct: 9   VFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQGG 68

Query: 66  DFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGK 125
           DFTH NGTG KSIYGEKFDDEN I KHTG GI SMANAGPNTNGSQF  CTAKT WLDG 
Sbjct: 69  DFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLDGM 128

Query: 126 HVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           HV  GKVKE +NI EAME FG RN KTSKKITIADCGQ
Sbjct: 129 HVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQ 166


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  268 bits (686), Expect = 1e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FFDI+V GKPLG +S + FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGGDFT+ NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  268 bits (686), Expect = 1e-72
 Identities = 128/158 (81%), Positives = 133/158 (84%)

Query: 6   IFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGG 65
           +FFDIT++ KPLG +S K FADK PKTAENF ALSTGEKGF YK SCFHRIIPGFMCQGG
Sbjct: 9   VFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQGG 68

Query: 66  DFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGK 125
           DFTH NGTG KSIYGEKFDDEN I KHTG GI SMANAGPNTNGSQF  CTAKT WLDG 
Sbjct: 69  DFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLDGM 128

Query: 126 HVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           HV  GKVKE +NI EAME FG RN KTSKKITIADCGQ
Sbjct: 129 HVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQ 166


>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  256 bits (655), Expect = 5e-69
 Identities = 124/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +F DI V G+PLG I  + FADKIPKT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQ GDFT  NGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  256 bits (655), Expect = 5e-69
 Identities = 124/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +F DI V G+PLG I  + FADKIPKT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQ GDFT  NGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  256 bits (655), Expect = 5e-69
 Identities = 124/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +F DI V G+PLG I  + FADKIPKT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQ GDFT  NGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  252 bits (644), Expect = 9e-68
 Identities = 123/162 (75%), Positives = 132/162 (81%)

Query: 2   VNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFM 61
           VN  +FFDI VDG+PLG +S + FADK PK+AE   ALSTGEKGF YKGSCFHRIIPGFM
Sbjct: 48  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 107

Query: 62  CQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEW 121
           CQGGDFT    TG KS+Y EKFDDEN I KHTG GILSMANAGPNTN SQ FICTAKTE 
Sbjct: 108 CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 167

Query: 122 LDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           LDGKHV FG VKE + IVEAME+FG RN KTSK+ITIADC Q
Sbjct: 168 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQ 209


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  252 bits (644), Expect = 9e-68
 Identities = 123/162 (75%), Positives = 132/162 (81%)

Query: 2   VNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFM 61
           VN  +FFDI VDG+PLG +S + FADK PK+AE   ALSTGEKGF YKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEW 121
           CQGGDFT    TG KS+Y EKFDDEN I KHTG GILSMANAGPNTN SQ FICTAKTE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           LDGKHV FG VKE + IVEAME+FG RN KTSK+ITIADC Q
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQ 185


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  252 bits (644), Expect = 9e-68
 Identities = 123/162 (75%), Positives = 132/162 (81%)

Query: 2   VNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFM 61
           VN  +FFDI VDG+PLG +S + FADK PK+AE   ALSTGEKGF YKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEW 121
           CQGGDFT    TG KS+Y EKFDDEN I KHTG GILSMANAGPNTN SQ FICTAKTE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           LDGKHV FG VKE + IVEAME+FG RN KTSK+ITIADC Q
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQ 185


>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  249 bits (635), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN   FF+     +P GRISI+ FADK PKTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  249 bits (635), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN   FF+     +P GRISI+ FADK PKTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  249 bits (635), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN   FF+     +P GRISI+ FADK PKTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MC GGDFTH NG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  243 bits (621), Expect = 4e-65
 Identities = 121/163 (74%), Positives = 129/163 (79%), Gaps = 1/163 (0%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FF++ +D KPL  IS   FADK+PKTAENF ALSTGEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGG FT  NGTG KSIYGEK DDEN I KHT  G LSMANAGPNTNGS+FFICTAKT 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
            +  KHV   KVKE +NIV AMEHFG RN KTSK IT ADCGQ
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQ 162


>gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  243 bits (621), Expect = 4e-65
 Identities = 121/163 (74%), Positives = 129/163 (79%), Gaps = 1/163 (0%)

Query: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60
           MVN  +FF++ +D KPL  IS   FADK+PKTAENF ALSTGEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120
           MCQGG FT  NGTG KSIYGEK DDEN I KHT  G LSMANAGPNTNGS+FFICTAKT 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
            +  KHV   KVKE +NIV AMEHFG RN KTSK IT ADCGQ
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQ 162


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score =  237 bits (604), Expect = 4e-63
 Identities = 107/161 (66%), Positives = 129/161 (80%)

Query: 3   NSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62
           N +++ D+  +GKPLGR+ ++  AD +PKTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104

Query: 63  QGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWL 122
           Q GDFT+ NGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFICT KT+WL
Sbjct: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164

Query: 123 DGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163
           DGKHV FG VKE +++V+ +E FG ++ +TSKKI I DCGQ
Sbjct: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  229 bits (585), Expect = 6e-61
 Identities = 110/141 (78%), Positives = 117/141 (82%)

Query: 23  KQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEK 82
           K F +KI K + NF A ST EKGF YKGSCFHRIIPGFMCQ GDFT+ NGTG KS+YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 83  FDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAM 142
           FD EN I KHTG GILSMAN G NTN SQFFICTAKTEWLDGKHV FGKVKE ++I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 143 EHFGYRNSKTSKKITIADCGQ 163
           E FG RN KTSKKITIADCGQ
Sbjct: 200 ERFGSRNGKTSKKITIADCGQ 220


>gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  229 bits (585), Expect = 6e-61
 Identities = 110/141 (78%), Positives = 117/141 (82%)

Query: 23  KQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEK 82
           K F +KI K + NF A ST EKGF YKGSCFHRIIPGFMCQ GDFT+ NGTG KS+YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 83  FDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAM 142
           FD EN I KHTG GILSMAN G NTN SQFFICTAKTEWLDGKHV FGKVKE ++I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 143 EHFGYRNSKTSKKITIADCGQ 163
           E FG RN KTSKKITIADCGQ
Sbjct: 200 ERFGSRNGKTSKKITIADCGQ 220


>gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  229 bits (585), Expect = 6e-61
 Identities = 110/141 (78%), Positives = 117/141 (82%)

Query: 23  KQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEK 82
           K F +KI K + NF A ST EKGF YKGSCFHRIIPGFMCQ GDFT+ NGTG KS+YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 83  FDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAM 142
           FD EN I KHTG GILSMAN G NTN SQFFICTAKTEWLDGKHV FGKVKE ++I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 143 EHFGYRNSKTSKKITIADCGQ 163
           E FG RN KTSKKITIADCGQ
Sbjct: 200 ERFGSRNGKTSKKITIADCGQ 220


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,530,548
Number of Sequences: 37866
Number of extensions: 297341
Number of successful extensions: 575
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 466
Number of HSP's gapped (non-prelim): 83
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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