Guide to the Human Genome
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Name: ZNF354B Sequence: fasta or formatted (612aa) NCBI GI: 17530791
Description:

zinc finger protein 354B

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         25           2
 C cysteine            5.4         33           1
 D aspartate           2.0         12           1
 E glutamate           7.2         44           2
 F phenylalanine       4.2         26           1
 G glycine             5.1         31           1
 H histidine           5.6         34           1
 I isoleucine          5.4         33           2
 K lysine             10.8         66           2
 L leucine             7.0         43           2
 M methionine          0.8          5           1
 N asparagine          4.6         28           1
 P proline             2.8         17           1
 Q glutamine           6.2         38           2
 R arginine            6.7         41           2
 S serine             10.9         67           4
 T threonine           5.4         33           1
 V valine              2.5         15           1
 W tryptophan          0.7          4           1
 Y tyrosine            2.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 354B 
ZNF354A               0.835   zinc finger protein 354A 
ZNF135                0.445   zinc finger protein 135 
ZNF624                0.443   zinc finger protein 624 
ZNF184                0.441   zinc finger protein 184 
DKFZp686E2433         0.429   hypothetical protein LOC345462 
ZNF470                0.428   zinc finger protein 470 
ZNF93                 0.427   zinc finger protein 93 
ZNF569                0.426   zinc finger protein 569 
ZNF568                0.425   zinc finger protein 568 
ZNF85                 0.422   zinc finger protein 85 
ZNF429                0.420   zinc finger protein 429 
ZNF287                0.420   zinc finger protein 287 
ZNF30                 0.420   zinc finger protein 30 isoform b 
ZNF726                0.418   PREDICTED: zinc finger protein 726 
ZNF726                0.418   PREDICTED: zinc finger protein 726 
ZNF726                0.418   PREDICTED: zinc finger protein 726 
ZNF595                0.418   zinc finger protein 595 
ZNF420                0.416   zinc finger protein 420 
ZNF30                 0.416   zinc finger protein 30 isoform a 
ZNF30                 0.416   zinc finger protein 30 isoform a 
ZNF91                 0.415   zinc finger protein 91 
ZNF471                0.415   zinc finger protein 471 
ZNF534                0.410   zinc finger protein 534 isoform 1 
ZFP90                 0.410   zinc finger protein 90 
ZNF99                 0.409   zinc finger protein 99 
ZNF43                 0.409   zinc finger protein 43 
ZNF66                 0.408   PREDICTED: zinc finger protein 66 
ZNF66                 0.408   PREDICTED: zinc finger protein 66 
ZNF66                 0.408   PREDICTED: zinc finger protein 66 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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