Guide to the Human Genome
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Name: ZNF45 Sequence: fasta or formatted (682aa) NCBI GI: 4508029
Description:

zinc finger protein 45

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         27           1
 C cysteine            5.9         40           1
 D aspartate           3.1         21           2
 E glutamate           8.4         57           3
 F phenylalanine       4.1         28           1
 G glycine             8.2         56           1
 H histidine           6.9         47           2
 I isoleucine          2.1         14           2
 K lysine              8.8         60           2
 L leucine             5.6         38           2
 M methionine          0.9          6           2
 N asparagine          2.6         18           1
 P proline             3.5         24           1
 Q glutamine           6.5         44           2
 R arginine            6.7         46           2
 S serine              9.2         63           3
 T threonine           3.8         26           1
 V valine              4.8         33           2
 W tryptophan          0.9          6           1
 Y tyrosine            4.1         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 45 
ZNF234                0.521   zinc finger protein 234 
ZNF234                0.521   zinc finger protein 234 
ZNF227                0.506   zinc finger protein 227 
ZNF235                0.499   zinc finger protein 93 homolog 
ZNF226                0.493   zinc finger protein 226 isoform a 
ZNF226                0.493   zinc finger protein 226 isoform a 
ZNF224                0.489   zinc finger protein 224 
ZNF225                0.485   zinc finger protein 225 
ZNF208                0.455   zinc finger protein 208 
ZNF420                0.454   zinc finger protein 420 
ZNF665                0.449   zinc finger protein 665 
ZNF726                0.443   PREDICTED: zinc finger protein 726 
ZNF726                0.443   PREDICTED: zinc finger protein 726 
ZNF726                0.443   PREDICTED: zinc finger protein 726 
ZNF569                0.442   zinc finger protein 569 
ZFP112                0.436   zinc finger protein 228 isoform 1 
ZFP112                0.436   zinc finger protein 228 isoform 2 
ZNF184                0.434   zinc finger protein 184 
ZNF99                 0.433   zinc finger protein 99 
ZNF616                0.432   zinc finger protein 616 
ZNF229                0.431   zinc finger protein 229 
ZNF493                0.428   zinc finger protein 493 isoform 3 
ZNF43                 0.428   zinc finger protein 43 
ZNF595                0.427   zinc finger protein 595 
ZNF91                 0.426   zinc finger protein 91 
ZNF658                0.424   zinc finger protein 658 
ZNF761                0.424   zinc finger protein 761 
LOC100292052          0.423   PREDICTED: similar to hCG1773661 
LOC100287226          0.423   PREDICTED: similar to hCG1773661 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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