Guide to the Human Genome
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Name: ZNF239 Sequence: fasta or formatted (458aa) NCBI GI: 149999362
Description:

zinc finger protein 239

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [458aa] zinc finger protein 239
alt mRNA [458aa] zinc finger protein 239
alt mRNA [458aa] zinc finger protein 239
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          8           1
 C cysteine            6.6         30           1
 D aspartate           4.1         19           1
 E glutamate           8.5         39           2
 F phenylalanine       2.6         12           1
 G glycine             7.9         36           1
 H histidine           6.8         31           2
 I isoleucine          4.4         20           1
 K lysine              8.7         40           2
 L leucine             6.1         28           3
 M methionine          0.9          4           1
 N asparagine          3.3         15           2
 P proline             4.1         19           1
 Q glutamine           7.0         32           2
 R arginine            4.4         20           2
 S serine             11.6         53           3
 T threonine           4.4         20           1
 V valine              3.9         18           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 239 
ZNF239                1.000   zinc finger protein 239 
ZNF239                1.000   zinc finger protein 239 
ZNF239                1.000   zinc finger protein 239 
ZNF214                0.409   zinc finger protein 214 
ZNF227                0.397   zinc finger protein 227 
ZNF229                0.392   zinc finger protein 229 
ZNF45                 0.391   zinc finger protein 45 
ZNF180                0.389   zinc finger protein 180 
ZFP112                0.384   zinc finger protein 228 isoform 1 
ZFP112                0.384   zinc finger protein 228 isoform 2 
ZNF226                0.383   zinc finger protein 226 isoform a 
ZNF226                0.383   zinc finger protein 226 isoform a 
ZNF235                0.383   zinc finger protein 93 homolog 
ZNF300                0.382   zinc finger protein 300 
ZNF436                0.374   zinc finger protein 436 
ZNF436                0.374   zinc finger protein 436 
ZNF234                0.373   zinc finger protein 234 
ZNF234                0.373   zinc finger protein 234 
ZFP2                  0.373   zinc finger protein 2 homolog 
ZSCAN2                0.371   zinc finger protein 29 isoform 1 
ZNF135                0.371   zinc finger protein 135 
ZNF167                0.370   zinc finger protein 167 isoform 1 
ZNF782                0.370   zinc finger protein 782 
ZNF91                 0.369   zinc finger protein 91 
ZNF285A               0.369   zinc finger protein 285 
ZNF569                0.368   zinc finger protein 569 
DKFZp686E2433         0.367   hypothetical protein LOC345462 
ZNF630                0.367   zinc finger protein 630 
ZNF852                0.366   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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