Guide to the Human Genome
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Name: ZNF83 Sequence: fasta or formatted (516aa) NCBI GI: 157738655
Description:

zinc finger protein 83 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [516aa] zinc finger protein 83 isoform a
alt mRNA [516aa] zinc finger protein 83 isoform a
alt mRNA [516aa] zinc finger protein 83 isoform a
alt mRNA [516aa] zinc finger protein 83 isoform a
alt prot [488aa] zinc finger protein 83 isoform b
alt prot [488aa] zinc finger protein 83 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         18           1
 C cysteine            6.0         31           1
 D aspartate           1.7          9           2
 E glutamate           6.4         33           1
 F phenylalanine       4.5         23           1
 G glycine             6.6         34           1
 H histidine          10.3         53           2
 I isoleucine          5.2         27           2
 K lysine             11.4         59           2
 L leucine             5.0         26           1
 M methionine          0.8          4           1
 N asparagine          6.0         31           1
 P proline             3.1         16           2
 Q glutamine           5.0         26           1
 R arginine            4.1         21           2
 S serine              7.4         38           3
 T threonine           4.5         23           1
 V valine              4.1         21           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.9         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 83 isoform a 
ZNF83                 1.000   zinc finger protein 83 isoform a 
ZNF83                 1.000   zinc finger protein 83 isoform a 
ZNF83                 1.000   zinc finger protein 83 isoform a 
ZNF83                 1.000   zinc finger protein 83 isoform a 
ZNF83                 0.811   zinc finger protein 83 isoform b 
ZNF83                 0.811   zinc finger protein 83 isoform b 
ZNF347                0.613   zinc finger protein 347 
ZNF160                0.607   zinc finger protein 160 
ZNF160                0.607   zinc finger protein 160 
ZNF160                0.607   zinc finger protein 160 
ZNF665                0.600   zinc finger protein 665 
LOC388559             0.591   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.591   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.591   PREDICTED: hypothetical protein LOC388559 
LOC400713             0.568   zinc finger protein LOC400713 
ZNF813                0.566   zinc finger protein 813 
ZNF534                0.565   zinc finger protein 534 isoform 2 
ZNF534                0.565   zinc finger protein 534 isoform 1 
ZNF528                0.563   zinc finger protein 528 
ZNF836                0.562   zinc finger protein 836 
ZNF816A               0.555   zinc finger protein 816A 
ZNF616                0.554   zinc finger protein 616 
ZNF28                 0.553   zinc finger protein 28 
ZNF841                0.550   zinc finger protein 841 
ZNF845                0.547   zinc finger protein 845 
ZNF600                0.537   zinc finger protein 600 
ZNF761                0.536   zinc finger protein 761 
ZNF808                0.527   zinc finger protein 808 
ZNF860                0.526   zinc finger protein 860 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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