Guide to the Human Genome
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Search of human proteins with 172072600

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1
[Homo sapiens]
         (265 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...   565   e-161
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...   565   e-161
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...   352   2e-97
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa...    99   3e-21
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo...    67   1e-11
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s...    67   1e-11
gi|56550061 leukocyte membrane antigen [Homo sapiens]                  59   4e-09
gi|31324530 CD300e molecule [Homo sapiens]                             57   2e-08
gi|5729776 CD300C antigen [Homo sapiens]                               54   1e-07
gi|38455398 NK inhibitory receptor precursor [Homo sapiens]            54   2e-07
gi|21687218 CD300 molecule-like family member g [Homo sapiens]         49   3e-06
gi|37700254 triggering receptor expressed on myeloid cells-like ...    49   5e-06
gi|154759271 CD300 molecule-like family member b [Homo sapiens]        49   5e-06
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   6e-06
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   6e-06
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   6e-06
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa...    45   7e-05
gi|169646348 CD300 molecule-like family member d [Homo sapiens]        44   2e-04
gi|9507203 triggering receptor expressed on myeloid cells 2 prec...    42   4e-04
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]      40   0.002
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]      40   0.002
gi|30794266 triggering receptor expressed on myeloid cells-like ...    39   0.005
gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens]            35   0.052
gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]             35   0.052
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]         35   0.088
gi|38372931 brevican isoform 2 [Homo sapiens]                          33   0.20 
gi|38372935 brevican isoform 1 [Homo sapiens]                          33   0.20 
gi|42544177 complement component (3d/Epstein Barr virus) recepto...    31   0.98 
gi|54792123 complement component (3d/Epstein Barr virus) recepto...    31   0.98 
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom...    31   0.98 

>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
           sapiens]
          Length = 265

 Score =  565 bits (1456), Expect = e-161
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
           MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF
Sbjct: 1   MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60

Query: 61  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
           ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 61  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120

Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
           GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180

Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
           FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL
Sbjct: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240

Query: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
           CLWLWFYCKGSSGEGGPLRRQKGSP
Sbjct: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265


>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
           sapiens]
          Length = 265

 Score =  565 bits (1456), Expect = e-161
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
           MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF
Sbjct: 1   MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60

Query: 61  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
           ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 61  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120

Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
           GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180

Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240
           FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL
Sbjct: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCL 240

Query: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265
           CLWLWFYCKGSSGEGGPLRRQKGSP
Sbjct: 241 CLWLWFYCKGSSGEGGPLRRQKGSP 265


>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
           sapiens]
          Length = 552

 Score =  352 bits (903), Expect = 2e-97
 Identities = 177/217 (81%), Positives = 178/217 (82%), Gaps = 25/217 (11%)

Query: 1   MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSF 60
           MDGEATVKPGEQ  +   G   D                       P F       GSSF
Sbjct: 1   MDGEATVKPGEQVPLWTHGWPPDDPS--------------------PSFAA-----GSSF 35

Query: 61  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 120
           ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG
Sbjct: 36  ALPQKRPHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPG 95

Query: 121 GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 180
           GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL
Sbjct: 96  GAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGL 155

Query: 181 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA 217
           FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA
Sbjct: 156 FVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISA 192


>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
           sapiens]
          Length = 764

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)

Query: 111 GSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRV 170
           G   V+   G +V+I C+Y P+SVNRH RKYWCR G  R  C T++S+  Y   +Y  R 
Sbjct: 24  GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA-RGGCITLISSEGYVSSKYAGRA 82

Query: 171 ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
            LT+FP+ G FVV ++QLS DD G Y CG+G  +  L   ++L +S
Sbjct: 83  NLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS 128



 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 19/121 (15%)

Query: 87  GTLRPSSPL-CWR----EESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK- 140
           G L+  SP+  W+    EES+       +   +V G  GG+V + C Y     NR + K 
Sbjct: 331 GQLQEGSPIQAWQLFVNEESTIP-----RSPTVVKGVAGGSVAVLCPY-----NRKESKS 380

Query: 141 --YWCRL-GPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYL 197
             YWC   G     C  +V +  +   +Y  R++L + P  G F V L+QL+  D G Y 
Sbjct: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440

Query: 198 C 198
           C
Sbjct: 441 C 441



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 114 LVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALT 173
           LV  +  G+VT  C   P   N    K+ CR       C  +V+T       +  R+ L 
Sbjct: 244 LVYEDLRGSVTFHCALGPEVAN--VAKFLCRQSSGE-NCDVVVNTLGKRAPAFEGRILLN 300

Query: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNM 206
              + G F V ++ L  +D G YLCG  S+  +
Sbjct: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQL 333



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)

Query: 106 PNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKY-WCRLGPPRWICQTIVSTNQYTHH 164
           P  L  +++ + + G  VTI C +   +  + +  Y    L P       ++ ++ Y + 
Sbjct: 131 PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-----LVIDSSGYVNP 185

Query: 165 RYRDRVALTDFPQRG--LFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTI----SAV 218
            Y  R+ L D    G  LF V ++QL   D G YLC  G ++N    + +L +      +
Sbjct: 186 NYTGRIRL-DIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244

Query: 219 LFQKMK------AALGPWLLSLPCWPCLCLWLWFYCKGSSGE 254
           +++ ++       ALGP + ++           F C+ SSGE
Sbjct: 245 VYEDLRGSVTFHCALGPEVANV---------AKFLCRQSSGE 277


>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
           sapiens]
          Length = 390

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
           V GE GG+VTI+C         H R Y CR       C T+VST  +    Y+ RV L  
Sbjct: 25  VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80

Query: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
           +P++ LF+V ++QL+  D G Y CG G
Sbjct: 81  YPRKNLFLVEVTQLTESDSGVYACGAG 107


>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
           sapiens]
          Length = 390

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
           V GE GG+VTI+C         H R Y CR       C T+VST  +    Y+ RV L  
Sbjct: 25  VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80

Query: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
           +P++ LF+V ++QL+  D G Y CG G
Sbjct: 81  YPRKNLFLVEVTQLTESDSGVYACGAG 107


>gi|56550061 leukocyte membrane antigen [Homo sapiens]
          Length = 299

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPR-WICQTIVSTNQYTHHRY 166
           +L   R V+G  GG++++QC Y     +R   KYWCR  PP+ ++C  IV T      R 
Sbjct: 17  ALSKCRTVAGPVGGSLSVQCPYEKE--HRTLNKYWCR--PPQIFLCDKIVETKGSAGKR- 71

Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
             RV++ D P    F V L  L+ +D G Y CG+
Sbjct: 72  NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 105


>gi|31324530 CD300e molecule [Homo sapiens]
          Length = 205

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
           SL G   V+G  G ++T+ C Y   S+ +   KYWCR G     C++IV T         
Sbjct: 17  SLTGPGSVTGTAGDSLTVWCQY--ESMYKGYNKYWCR-GQYDTSCESIVETKGEEKVERN 73

Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
            RV++ D P+   F V +  L+ DD G Y C I
Sbjct: 74  GRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKI 106


>gi|5729776 CD300C antigen [Homo sapiens]
          Length = 224

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWI-CQTIVSTNQYTHHRYRDRVALT 173
           V+G  GG++++QC Y     +R   K+WCR  PP+ + C  IV T      R   RV++ 
Sbjct: 31  VAGPVGGSLSVQCRYEKE--HRTLNKFWCR--PPQILRCDKIVETKGSAGKR-NGRVSIR 85

Query: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGI 200
           D P    F V L  L+ +D G Y CG+
Sbjct: 86  DSPANLSFTVTLENLTEEDAGTYWCGV 112


>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
          Length = 290

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 3/131 (2%)

Query: 101 SSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQ 160
           S ++    + G   V+G   G++T+QC Y   S      K+WCR G     C+ +V T+ 
Sbjct: 14  SGYSIVTQITGPTTVNGLERGSLTVQCVYR--SGWETYLKWWCR-GAIWRDCKILVKTSG 70

Query: 161 YTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAVLF 220
                 RDRV++ D  +   F V +  L   D   Y CGI    N L +++ +TI     
Sbjct: 71  SEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPAPV 130

Query: 221 QKMKAALGPWL 231
            + + +  P L
Sbjct: 131 TQEETSSSPTL 141


>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
          Length = 332

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWI-CQTIVSTNQYTHHRY 166
           +L+G   +SG  G  V++QC Y      R  RKYWCR G   +  C   +   +      
Sbjct: 18  ALEGPEEISGFEGDTVSLQCTYREEL--RDHRKYWCRKGGILFSRCSGTIYAEEEGQETM 75

Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
           + RV++ D  Q    +V L  L+  D G Y CG+
Sbjct: 76  KGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGV 109


>gi|37700254 triggering receptor expressed on myeloid cells-like 4
           [Homo sapiens]
          Length = 200

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)

Query: 119 PGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQR 178
           PG  + +QC Y+P     +Q K WC+   P      + S+  +T  + +    + D P  
Sbjct: 32  PGQTLLLQCQYSPKR-GPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQ-KSHYTIWDKPNA 89

Query: 179 GLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
           G F + + QL+ +D G Y CGI  +  N++ +  N+++
Sbjct: 90  GFFNITMIQLTQNDSGFYWCGIYNASENIITVLRNISL 127


>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
          Length = 238

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRW-ICQTIVSTNQYTHHRY 166
           S++G   V     G++T+QCHY          K+WCR    RW  C+ ++ T        
Sbjct: 54  SIQGPESVRAPEQGSLTVQCHYKQGWET--YIKWWCR--GVRWDTCKILIETRGSEQGEK 109

Query: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
            DRV++ D  +   F V +  L  DD   Y CGI
Sbjct: 110 SDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGI 143


>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 328

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
           ++ G   V G  G ++++QC Y      +   KYWCR  P   I   +V T         
Sbjct: 151 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 207

Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
           D+V +TD P    F V L  L+ DD G Y CGI +
Sbjct: 208 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 242


>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 259

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
           ++ G   V G  G ++++QC Y      +   KYWCR  P   I   +V T         
Sbjct: 82  TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 138

Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
           D+V +TD P    F V L  L+ DD G Y CGI +
Sbjct: 139 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 173


>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 328

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
           ++ G   V G  G ++++QC Y      +   KYWCR  P   I   +V T         
Sbjct: 151 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 207

Query: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
           D+V +TD P    F V L  L+ DD G Y CGI +
Sbjct: 208 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 242


>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
           sapiens]
          Length = 276

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 103 FAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYT 162
           F    +   ++++    G  +T++C Y P+  + +++K WC+      +C  +V++++  
Sbjct: 16  FPGSQAQSKAQVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL-VCIRLVTSSKPR 73

Query: 163 HHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
              +  R  + D P  G F V ++ L  +D G Y C I
Sbjct: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111


>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
          Length = 194

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 89  LRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPP 148
           L PS  L      S AA   + G   V+G   G++T+QC Y   S      K+ C+ G  
Sbjct: 3   LSPSLLLLILPGYSIAA--KITGPTTVNGSEQGSLTVQCAYG--SGWETYLKWRCQ-GAD 57

Query: 149 RWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLF 208
              C  +V TN       ++RV++ D  +  +F V +  L  DD   Y CG       L 
Sbjct: 58  WNYCNILVKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPGIDLG 117

Query: 209 LSMNLTIS 216
           + + +TI+
Sbjct: 118 VKVQVTIN 125


>gi|9507203 triggering receptor expressed on myeloid cells 2
           precursor [Homo sapiens]
          Length = 230

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 117 GEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTH----HRYRDRVAL 172
           G  G ++ + C Y  S  +  +RK WCR    +  CQ +VST+         R+    A+
Sbjct: 26  GVAGQSLQVSCPY-DSMKHWGRRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAI 84

Query: 173 TDFPQRGLFVVRLSQLSPDDIGCYLC 198
           TD    G   + L  L P D G Y C
Sbjct: 85  TDDTLGGTLTITLRNLQPHDAGLYQC 110


>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
          Length = 364

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 107 NSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRY 166
           +S+ GS  V GE G +VT+ CHY+ +  +    +  C L    + CQ  +     TH  Y
Sbjct: 16  DSVAGSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSL----FTCQNGIVWTNGTHVTY 71

Query: 167 RDRV---ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
           R       L D  +R + +  +   +  D G Y C +  E+   F  M +T+S
Sbjct: 72  RKDTRYKLLGDLSRRDVSLT-IENTAVSDSGVYCCRV--EHRGWFNDMKITVS 121


>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
          Length = 364

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 107 NSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRY 166
           +S+ GS  V GE G +VT+ CHY+ +  +    +  C L    + CQ  +     TH  Y
Sbjct: 16  DSVAGSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSL----FTCQNGIVWTNGTHVTY 71

Query: 167 RDRV---ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
           R       L D  +R + +  +   +  D G Y C +  E+   F  M +T+S
Sbjct: 72  RKDTRYKLLGDLSRRDVSLT-IENTAVSDSGVYCCRV--EHRGWFNDMKITVS 121


>gi|30794266 triggering receptor expressed on myeloid cells-like 1
           [Homo sapiens]
          Length = 311

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)

Query: 109 LKGSRLVSGEP-------GGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQY 161
           L+G  +V   P       G ++ +QCHY    V    +K WCR  P    CQ +VS+   
Sbjct: 13  LEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVK--AQKVWCRFLPEG--CQPLVSSAVD 68

Query: 162 THHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI-GSENNMLFLSMNLTI 215
                  R  LTD    GL  V +  L  +D G Y C + G+    +   ++L I
Sbjct: 69  RRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNI 122


>gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens]
          Length = 266

 Score = 35.4 bits (80), Expect = 0.052
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)

Query: 127 CHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLS 186
           C+Y  ++  ++  KYWCR G  R  C  I  +   T+H     VAL D   +   +V +S
Sbjct: 93  CNY--NAHYKNHPKYWCR-GYFRDYCNIIAFSPNSTNH-----VALRDTGNQ--LIVTMS 142

Query: 187 QLSPDDIGCYLCGI 200
            L+ +D G Y CGI
Sbjct: 143 CLTKEDTGWYWCGI 156


>gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]
          Length = 347

 Score = 35.4 bits (80), Expect = 0.052
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)

Query: 127 CHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLS 186
           C+Y  ++  ++  KYWCR G  R  C  I  +   T+H     VAL D   +   +V +S
Sbjct: 174 CNY--NAHYKNHPKYWCR-GYFRDYCNIIAFSPNSTNH-----VALRDTGNQ--LIVTMS 223

Query: 187 QLSPDDIGCYLCGI 200
            L+ +D G Y CGI
Sbjct: 224 CLTKEDTGWYWCGI 237


>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
          Length = 551

 Score = 34.7 bits (78), Expect = 0.088
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 47  PLFLILCLLQGSSFALPQKR-PHPRWLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAA 105
           PL  +   L  S ++LPQ   P   W  EG      H R     RP+  LCWR E     
Sbjct: 319 PLGFLQIFLNLSVYSLPQLLGPSCSWEAEG-----LHCRCSFRARPAPSLCWRLEEKPLE 373

Query: 106 PNSLKGSRLVSGEPGG 121
            NS +GS  V+    G
Sbjct: 374 GNSSQGSFKVNSSSAG 389


>gi|38372931 brevican isoform 2 [Homo sapiens]
          Length = 671

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 11/102 (10%)

Query: 109 LKGSRLVSGEPGGAVTIQCHY-----APS--SVNRHQRKYWCRLGPPRWICQTIVS--TN 159
           + G   + G  GGA+TI CH       PS  +V    R  W  L   R   + +V+    
Sbjct: 39  IAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR-EAEVLVARGVR 97

Query: 160 QYTHHRYRDRVALTDFPQRGLFV-VRLSQLSPDDIGCYLCGI 200
              +  YR RVAL  +P     V + LS+L P+D G Y C +
Sbjct: 98  VKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEV 139


>gi|38372935 brevican isoform 1 [Homo sapiens]
          Length = 911

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 11/102 (10%)

Query: 109 LKGSRLVSGEPGGAVTIQCHY-----APS--SVNRHQRKYWCRLGPPRWICQTIVS--TN 159
           + G   + G  GGA+TI CH       PS  +V    R  W  L   R   + +V+    
Sbjct: 39  IAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR-EAEVLVARGVR 97

Query: 160 QYTHHRYRDRVALTDFPQRGLFV-VRLSQLSPDDIGCYLCGI 200
              +  YR RVAL  +P     V + LS+L P+D G Y C +
Sbjct: 98  VKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEV 139


>gi|42544177 complement component (3d/Epstein Barr virus) receptor 2
           isoform 2 [Homo sapiens]
          Length = 1033

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 85  AMGTLRPSSPLCWREESSFAAPNSLKGSR----LVSGEPGGAVTIQCH 128
           A GT  PS+P+C  E+   A PN L G +    +V  +PG ++   C+
Sbjct: 395 AQGTWEPSAPVC--EKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCN 440


>gi|54792123 complement component (3d/Epstein Barr virus) receptor 2
           isoform 1 [Homo sapiens]
          Length = 1092

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 85  AMGTLRPSSPLCWREESSFAAPNSLKGSR----LVSGEPGGAVTIQCH 128
           A GT  PS+P+C  E+   A PN L G +    +V  +PG ++   C+
Sbjct: 395 AQGTWEPSAPVC--EKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCN 440


>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
           sapiens]
          Length = 234

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 120 GGAVTIQCHYAPSSVNRHQRKYWC-RLG--PPRWICQTIVSTNQYTHHRYRDRVALTDFP 176
           G  + ++C Y        Q+ +   R G  P    C    S N  +H     R+ L D+ 
Sbjct: 34  GQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKN--SHPVQVGRIILEDYH 91

Query: 177 QRGLFVVRLSQLSPDDIGCYLCGI---GSENNMLFLSMNLTIS 216
             GL  VR+  L  +D G Y C I     E +MLF  + L ++
Sbjct: 92  DHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVT 134


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,103,607
Number of Sequences: 37866
Number of extensions: 597137
Number of successful extensions: 1358
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1296
Number of HSP's gapped (non-prelim): 63
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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