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Search of human proteins with 169216732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
(409 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 837 0.0
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 833 0.0
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H... 630 0.0
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 629 e-180
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 629 e-180
gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo ... 273 3e-73
gi|187607308 paraneoplastic antigen like 6A [Homo sapiens] 273 3e-73
gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo ... 270 2e-72
gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo ... 270 2e-72
gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo sa... 194 9e-50
gi|156766066 paraneoplastic antigen like 5 [Homo sapiens] 186 3e-47
gi|156766064 paraneoplastic antigen like 5 [Homo sapiens] 186 3e-47
gi|24308384 paraneoplastic antigen like 5 [Homo sapiens] 186 3e-47
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 177 1e-44
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 176 3e-44
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens] 166 4e-41
gi|19923584 modulator of apoptosis 1 [Homo sapiens] 151 1e-36
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens] 138 8e-33
gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens] 111 1e-24
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens] 109 5e-24
gi|156766054 PNMA-like 1 isoform b [Homo sapiens] 102 8e-22
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 102 8e-22
gi|146219841 PNMA-like 2 [Homo sapiens] 81 1e-15
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 42 0.001
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 41 0.002
gi|153070260 myristoylated alanine-rich protein kinase C substra... 39 0.007
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 39 0.009
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 39 0.011
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 39 0.011
gi|27734897 hypothetical protein LOC203111 [Homo sapiens] 39 0.011
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 837 bits (2161), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE 120
GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE
Sbjct: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE 120
Query: 121 ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL 180
ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL
Sbjct: 121 ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL 180
Query: 181 GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ 240
GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ
Sbjct: 181 GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ 240
Query: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300
VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES
Sbjct: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300
Query: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP 360
EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP
Sbjct: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP 360
Query: 361 IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV
Sbjct: 361 IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 833 bits (2153), Expect = 0.0
Identities = 408/409 (99%), Positives = 408/409 (99%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE 120
GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE
Sbjct: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELRPFSRREQPGCEE 120
Query: 121 ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL 180
ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL
Sbjct: 121 ESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAAL 180
Query: 181 GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ 240
GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ
Sbjct: 181 GQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQ 240
Query: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300
VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES
Sbjct: 241 VLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVES 300
Query: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP 360
EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP
Sbjct: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP 360
Query: 361 IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLW PPPFLPCDPDDHV
Sbjct: 361 IEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWSPPPFLPCDPDDHV 409
>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 630 bits (1624), Expect = 0.0
Identities = 326/412 (79%), Positives = 355/412 (86%), Gaps = 4/412 (0%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
+ALAML+DWCR MG NAERSLLIL IPDDC+EHEFQEAVRAALSPLGRYRVL K FRKEL
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQ---PVLENRAYRELRPFSRREQPG 117
GA+AALVEFAE LN+SLIP QI G GGPWKVI LPQ P+++ AYRELRPFS REQPG
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQTLRPLVKTMAYRELRPFSGREQPG 310
Query: 118 CEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCL 177
C EESFESW+E AKDMLQLWCHASERE++R LL+SL G AL++VSGLLEED + SA DCL
Sbjct: 311 CVEESFESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCL 370
Query: 178 AALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLR 237
ALGQVFR++DT MTSR+KFLTCTQGPQEGLFAFVVRLEGLLQ+AVEKGAV PA+AN+LR
Sbjct: 371 TALGQVFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLR 430
Query: 238 LQQVLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAP 297
L+QVLS ARPSEALQDTLR MQLE+RPP FL LLRLIR+MEAWAA ARSQQGVAWAAAP
Sbjct: 431 LRQVLSRARPSEALQDTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAP 490
Query: 298 VESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQ 357
VESEDPAAAQASPAQG+ASEA PGAEDA EAAS TKEAAR APA GE E+APAG EGLGQ
Sbjct: 491 VESEDPAAAQASPAQGDASEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQ 550
Query: 358 ARPIEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
R + P G PARM SAV + P G SW PEGL+QG WPPPP LP D DDHV
Sbjct: 551 GRSPDAP-GGLPARMGSAVDMAPGGPSWEPEGLVQGSWPPPPALPSDSDDHV 601
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 629 bits (1623), Expect = e-180
Identities = 326/412 (79%), Positives = 355/412 (86%), Gaps = 4/412 (0%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
+ALAML+DWCR MG NAERSLLIL IPDDC+EHEFQEAVRAALSPLGRYRVL K FRKEL
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQ---PVLENRAYRELRPFSRREQPG 117
GA+AALVEFAE LN+SLIP QI G GGPWKVI LPQ P+++ AYRELRPFS REQPG
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQTLRPLVKTMAYRELRPFSGREQPG 310
Query: 118 CEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCL 177
C EESFESW+E AKDMLQLWCHASERE++R LL+SL G AL++VSGLLEED + SA DCL
Sbjct: 311 CVEESFESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCL 370
Query: 178 AALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLR 237
ALGQVFR++DT MTSR+KFLTCTQGPQEGLFAFVVRLEGLLQ+AVEKGAV PA+AN+LR
Sbjct: 371 TALGQVFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLR 430
Query: 238 LQQVLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAP 297
L+QVLS ARPSEALQDTLR MQLE+RPP FL LLRLIR+MEAWAA ARSQQGVAWAAAP
Sbjct: 431 LRQVLSRARPSEALQDTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAP 490
Query: 298 VESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQ 357
VESEDPAAAQASPAQG+ASEA PGAEDA EAAS TKEAAR APA GE E+APAG EGLGQ
Sbjct: 491 VESEDPAAAQASPAQGDASEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQ 550
Query: 358 ARPIEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
R + P G PARM SAV + P G SW PEGL+QG WPPPP LP D DDHV
Sbjct: 551 GRSPDAP-GGLPARMGSAVDMAPGGPSWEPEGLVQGPWPPPPALPSDSDDHV 601
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 629 bits (1623), Expect = e-180
Identities = 326/412 (79%), Positives = 355/412 (86%), Gaps = 4/412 (0%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
+ALAML+DWCR MG NAERSLLIL IPDDC+EHEFQEAVRAALSPLGRYRVL K FRKEL
Sbjct: 131 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 190
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQ---PVLENRAYRELRPFSRREQPG 117
GA+AALVEFAE LN+SLIP QI G GGPWKVI LPQ P+++ AYRELRPFS REQPG
Sbjct: 191 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQTLRPLVKTMAYRELRPFSGREQPG 250
Query: 118 CEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCL 177
C EESFESW+E AKDMLQLWCHASERE++R LL+SL G AL++VSGLLEED + SA DCL
Sbjct: 251 CVEESFESWLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCL 310
Query: 178 AALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLR 237
ALGQVFR++DT MTSR+KFLTCTQGPQEGLFAFVVRLEGLLQ+AVEKGAV PA+AN+LR
Sbjct: 311 TALGQVFRSRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLR 370
Query: 238 LQQVLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAP 297
L+QVLS ARPSEALQDTLR MQLE+RPP FL LLRLIR+MEAWAA ARSQQGVAWAAAP
Sbjct: 371 LRQVLSRARPSEALQDTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAP 430
Query: 298 VESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQ 357
VESEDPAAAQASPAQG+ASEA PGAEDA EAAS TKEAAR APA GE E+APAG EGLGQ
Sbjct: 431 VESEDPAAAQASPAQGDASEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQ 490
Query: 358 ARPIEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQGLWPPPPFLPCDPDDHV 409
R + P G PARM SAV + P G SW PEGL+QG WPPPP LP D DDHV
Sbjct: 491 GRSPDAP-GGLPARMGSAVDMAPGGPSWEPEGLVQGPWPPPPALPSDSDDHV 541
>gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo
sapiens]
Length = 399
Score = 273 bits (697), Expect = 3e-73
Identities = 162/383 (42%), Positives = 217/383 (56%), Gaps = 49/383 (12%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
QP +E Y+ L FS R+QP EESFE W++H +
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
Query: 313 GNASEAGPGAEDAAEAASATKEA 335
A GPG E + +EA
Sbjct: 360 VEAVPGGPGREPEGLRQAGGQEA 382
>gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
Length = 399
Score = 273 bits (697), Expect = 3e-73
Identities = 162/383 (42%), Positives = 217/383 (56%), Gaps = 49/383 (12%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
QP +E Y+ L FS R+QP EESFE W++H +
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
Query: 313 GNASEAGPGAEDAAEAASATKEA 335
A GPG E + +EA
Sbjct: 360 VEAVPGGPGREPEGLRQAGGQEA 382
>gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo
sapiens]
Length = 399
Score = 270 bits (689), Expect = 2e-72
Identities = 161/383 (42%), Positives = 216/383 (56%), Gaps = 49/383 (12%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
QP +E + L FS R+QP EESFE W++H +
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
Query: 313 GNASEAGPGAEDAAEAASATKEA 335
A GPG E + +EA
Sbjct: 360 VEAVPGGPGREPEGLLQAGGQEA 382
>gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
sapiens]
Length = 399
Score = 270 bits (689), Expect = 2e-72
Identities = 161/383 (42%), Positives = 216/383 (56%), Gaps = 49/383 (12%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
A AALVE +N +L+P +IPG GGPW V+F+P
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 96 -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132
QP +E + L FS R+QP EESFE W++H +
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
Query: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192
ML +W SERE++R LLE L G AL++V LL E+ +A DCLAAL QVF + +++ T
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
Query: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252
R+K LT Q E L AFV+RLE LLQ+A+EK A+ A A+ +RL+Q+L+ A +E L
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
Query: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312
+ LR +++ R P FL +L L+RE EAW A ARS + A + A A+AS +
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
Query: 313 GNASEAGPGAEDAAEAASATKEA 335
A GPG E + +EA
Sbjct: 360 VEAVPGGPGREPEGLLQAGGQEA 382
>gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo
sapiens]
Length = 463
Score = 194 bits (494), Expect = 9e-50
Identities = 138/380 (36%), Positives = 192/380 (50%), Gaps = 61/380 (16%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
M L +L+DWCR N R +LILGIP+DC E EF+E ++ A LGRYRV+ + FR+E
Sbjct: 1 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREE 60
Query: 61 GAKAALV---------------------------------EFAEYLNRSLIP-------- 79
A+A L+ EF LNR L
Sbjct: 61 NAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRTVSDM 120
Query: 80 HQIPG---NGGPWKVIFLP-------------QPVLENRAYRELRPFSRREQPGCEEESF 123
+++ G N +V P QP+LE YRELR FS +F
Sbjct: 121 NRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGALAF 180
Query: 124 ESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQV 183
++W+EH +MLQ+W E EK+R L+E L GPAL+VVSGL + +++ +CLAAL QV
Sbjct: 181 DAWLEHTTEMLQMW-QVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQQV 239
Query: 184 FRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLS 243
F ++ +++K Q E + +FV+RLE LLQRAVE V N RL++VLS
Sbjct: 240 FGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRVLS 299
Query: 244 WARPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAF--PAR-SQQGVAWAAAPVES 300
A + L+D L+ M+ ++PPGFL L++L+RE E W A P R S +G+ A P
Sbjct: 300 GATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATLGPDRESLEGLEVAPRPPAR 359
Query: 301 EDPAAAQASPAQGNASEAGP 320
A PA GN+ + P
Sbjct: 360 ITGVGAVPLPASGNSFDVRP 379
>gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 186 bits (473), Expect = 3e-47
Identities = 134/449 (29%), Positives = 204/449 (45%), Gaps = 89/449 (19%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MAL +L DWC+ M + ++LLI+GIP +C E E Q+ V+A L PL YRVL + FR+E
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
AKA +E A+ +N + +P IPG GG W+V+ P
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 96 ---------------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVE 128
+P E+ YR+L+ FS P EE+FE W+E
Sbjct: 121 ARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFEDWLE 180
Query: 129 HAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQD 188
+++ +W SE EK+R LLESL GPAL ++ L + +++ CL AL Q+F +++
Sbjct: 181 QVTEIMPIW-QVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGDKE 239
Query: 189 TRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPS 248
S+ +FL + E + F++RLE LLQ+AV K + + +RL+ +L+ +
Sbjct: 240 DFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVAMT 299
Query: 249 EALQDTLRGMQLEKRPPGFLGLLRLIREMEAW--------------------AAFPARSQ 288
AL+ L + PP FL L++LIR+ E W + AR++
Sbjct: 300 PALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQARAE 359
Query: 289 QGVAWAAAPVESEDPAAAQASPAQGN-----------ASEAGPGAEDAAEAASATKE--- 334
V+ A V++ + + QG SE+ G ED +A E
Sbjct: 360 ASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRG-EDHGQATYPKAENQT 418
Query: 335 -AARGAPAAGEGESAPAGPEGLGQARPIE 362
G AAGE AG + +P E
Sbjct: 419 PGREGPQAAGEELGNEAGAGAMSHPKPWE 447
>gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 186 bits (473), Expect = 3e-47
Identities = 134/449 (29%), Positives = 204/449 (45%), Gaps = 89/449 (19%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MAL +L DWC+ M + ++LLI+GIP +C E E Q+ V+A L PL YRVL + FR+E
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
AKA +E A+ +N + +P IPG GG W+V+ P
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 96 ---------------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVE 128
+P E+ YR+L+ FS P EE+FE W+E
Sbjct: 121 ARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFEDWLE 180
Query: 129 HAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQD 188
+++ +W SE EK+R LLESL GPAL ++ L + +++ CL AL Q+F +++
Sbjct: 181 QVTEIMPIW-QVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGDKE 239
Query: 189 TRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPS 248
S+ +FL + E + F++RLE LLQ+AV K + + +RL+ +L+ +
Sbjct: 240 DFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVAMT 299
Query: 249 EALQDTLRGMQLEKRPPGFLGLLRLIREMEAW--------------------AAFPARSQ 288
AL+ L + PP FL L++LIR+ E W + AR++
Sbjct: 300 PALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQARAE 359
Query: 289 QGVAWAAAPVESEDPAAAQASPAQGN-----------ASEAGPGAEDAAEAASATKE--- 334
V+ A V++ + + QG SE+ G ED +A E
Sbjct: 360 ASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRG-EDHGQATYPKAENQT 418
Query: 335 -AARGAPAAGEGESAPAGPEGLGQARPIE 362
G AAGE AG + +P E
Sbjct: 419 PGREGPQAAGEELGNEAGAGAMSHPKPWE 447
>gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 186 bits (473), Expect = 3e-47
Identities = 134/449 (29%), Positives = 204/449 (45%), Gaps = 89/449 (19%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MAL +L DWC+ M + ++LLI+GIP +C E E Q+ V+A L PL YRVL + FR+E
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95
AKA +E A+ +N + +P IPG GG W+V+ P
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 96 ---------------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVE 128
+P E+ YR+L+ FS P EE+FE W+E
Sbjct: 121 ARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFEDWLE 180
Query: 129 HAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQD 188
+++ +W SE EK+R LLESL GPAL ++ L + +++ CL AL Q+F +++
Sbjct: 181 QVTEIMPIW-QVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGDKE 239
Query: 189 TRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPS 248
S+ +FL + E + F++RLE LLQ+AV K + + +RL+ +L+ +
Sbjct: 240 DFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVAMT 299
Query: 249 EALQDTLRGMQLEKRPPGFLGLLRLIREMEAW--------------------AAFPARSQ 288
AL+ L + PP FL L++LIR+ E W + AR++
Sbjct: 300 PALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGASGRQARAE 359
Query: 289 QGVAWAAAPVESEDPAAAQASPAQGN-----------ASEAGPGAEDAAEAASATKE--- 334
V+ A V++ + + QG SE+ G ED +A E
Sbjct: 360 ASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRG-EDHGQATYPKAENQT 418
Query: 335 -AARGAPAAGEGESAPAGPEGLGQARPIE 362
G AAGE AG + +P E
Sbjct: 419 PGREGPQAAGEELGNEAGAGAMSHPKPWE 447
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 177 bits (450), Expect = 1e-44
Identities = 89/111 (80%), Positives = 95/111 (85%), Gaps = 7/111 (6%)
Query: 96 QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGG 155
Q VLENRAY+ELRPFS REQPGCEEESFESW+EHAKDMLQLW HASERE+KRWLLESLGG
Sbjct: 230 QAVLENRAYQELRPFSGREQPGCEEESFESWMEHAKDMLQLWYHASERERKRWLLESLGG 289
Query: 156 PALEVVSGLLEEDTNLSALDC-------LAALGQVFRNQDTRMTSRLKFLT 199
PAL+VVSGLLEED NL+ALDC A LGQ F N+D RMTSRLKFLT
Sbjct: 290 PALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFLT 340
Score = 166 bits (419), Expect = 5e-41
Identities = 83/96 (86%), Positives = 86/96 (89%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MALAMLRDWCR MG NAERSLLIL IPDDC+EHEFQEAVRAALSPLGRYRVL K FRKEL
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQ 96
GA+AALVEFAE LN+SLIP QI G GGPWKVI LPQ
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQ 96
Score = 31.2 bits (69), Expect = 1.8
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 290 GVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAP 349
G A A + A+A+ G+ASEA E A E AR + G++ P
Sbjct: 125 GAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDELRVAEEARESDEGAAGDTGP 184
Query: 350 AG-PEGLGQA 358
AG E +G+A
Sbjct: 185 AGEAEAVGEA 194
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 176 bits (446), Expect = 3e-44
Identities = 88/111 (79%), Positives = 95/111 (85%), Gaps = 7/111 (6%)
Query: 96 QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGG 155
Q VLENRAY+ELRPFS REQPGC+EESFESW+EHAKDMLQLW HASERE+KRWLLESLGG
Sbjct: 230 QAVLENRAYQELRPFSGREQPGCKEESFESWMEHAKDMLQLWYHASERERKRWLLESLGG 289
Query: 156 PALEVVSGLLEEDTNLSALDC-------LAALGQVFRNQDTRMTSRLKFLT 199
PAL+VVSGLLEED NL+ALDC A LGQ F N+D RMTSRLKFLT
Sbjct: 290 PALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFLT 340
Score = 166 bits (419), Expect = 5e-41
Identities = 83/96 (86%), Positives = 86/96 (89%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MALAMLRDWCR MG NAERSLLIL IPDDC+EHEFQEAVRAALSPLGRYRVL K FRKEL
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQ 96
GA+AALVEFAE LN+SLIP QI G GGPWKVI LPQ
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQ 96
Score = 31.2 bits (69), Expect = 1.8
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 290 GVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAP 349
G A A + A+A+ G+ASEA E A E AR + G++ P
Sbjct: 125 GAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDELRVAEEARESDEGAAGDTGP 184
Query: 350 AG-PEGLGQA 358
AG E +G+A
Sbjct: 185 AGEAEAVGEA 194
>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
Length = 353
Score = 166 bits (420), Expect = 4e-41
Identities = 117/335 (34%), Positives = 174/335 (51%), Gaps = 58/335 (17%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ +L DWCR M N++R+LL+ GIP +C E E +E ++AA+ P YR+L + F +E
Sbjct: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
Query: 61 GAKAALVEF------------------------------AEYLNRSLI------------ 78
AKAAL+E AE+L R +
Sbjct: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
Query: 79 --------PHQIPGNGGPWKVIF-----LPQPVLENRAYRELRPFSRREQPGCEEESFES 125
P PG P +++ + QP++E+ Y+ L FS R+ PG EE+F+
Sbjct: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
Query: 126 WVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFR 185
W+EH ++L+ W S+ EK+R L+ESL GPA +V+ L + ++ +CL AL QVF
Sbjct: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
Query: 186 NQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWA 245
+ ++ +++KFL Q P E L A+V+RLE LLQ+ VEKGA+ N RL+QV++ A
Sbjct: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
Query: 246 RPSEALQDTLRGMQLEKRP-PGFLGLLRLIREMEA 279
S A++ L + P P LL IRE EA
Sbjct: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
>gi|19923584 modulator of apoptosis 1 [Homo sapiens]
Length = 351
Score = 151 bits (381), Expect = 1e-36
Identities = 116/340 (34%), Positives = 161/340 (47%), Gaps = 67/340 (19%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
M L +L DWCR M N ++LLI GI C E +EA++A L+PLG YR+L + FR++
Sbjct: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
Query: 61 GAKAA-------------------------------------LVEFAEYL---------- 73
K A L E+L
Sbjct: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
Query: 74 -------NRSLIPHQ--IPGNGGPWKVIFLP--QPVLENRAYRELRPFSRREQPGCEEES 122
N SL P Q IP P L QP L+ Y++LR FS RE P EE
Sbjct: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGEEE 180
Query: 123 FESWVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQ 182
F W+ H M++ W + EK+R LLESL GPAL+V+ L + ++ +CL AL +
Sbjct: 181 FGRWMFHTTQMIKAW-QVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
Query: 183 VFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVL 242
VF D ++K+LT Q +E L A+V+RLE LLQ+ V++GA+ N RL QV+
Sbjct: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
Query: 243 SWARPSEALQDTLR---GMQLEKRPPGFLGLLRLIREMEA 279
+ A+ T+R + + PGFL LL LI++ EA
Sbjct: 300 -----AGAVHKTIRRELNLPEDGPAPGFLQLLVLIKDYEA 334
>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
Length = 364
Score = 138 bits (348), Expect = 8e-33
Identities = 79/184 (42%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 95 PQPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLG 154
PQP+L R YR+LR FS P EEESFE W+E A ++++ W +E EKKRWL ESL
Sbjct: 154 PQPLLPMR-YRKLRVFSGSAVPAPEEESFEVWLEQATEIVKEW-PVTEAEKKRWLAESLR 211
Query: 155 GPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVR 214
GPAL+++ + ++ ++S +CL A QVF + ++R T+++++L Q E + A+V+R
Sbjct: 212 GPALDLMHIVQADNPSISVEECLEAFKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLR 271
Query: 215 LEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLI 274
LE LL+RAVEK A+ +A+ +RL+QV++ A ++ L LR ++ + PP FL L+++I
Sbjct: 272 LETLLRRAVEKRAIPRRIADQVRLEQVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVI 331
Query: 275 REME 278
RE E
Sbjct: 332 REEE 335
Score = 97.1 bits (240), Expect = 3e-20
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MALA+L DWCR M + ++SL++ GIP D +E E QE ++ L LGRYR+L K FRK+
Sbjct: 1 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIF 93
A A L+E E + S IP ++ G GG WKVIF
Sbjct: 61 NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIF 93
>gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]
Length = 402
Score = 111 bits (278), Expect = 1e-24
Identities = 84/242 (34%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 97 PVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGP 156
P++ + A R ++ FS R P EE+FE+W+ +L W + SE EK + L+++L GP
Sbjct: 35 PIMASMADRNMKLFSGRVVPAQGEETFENWLTQVNGVLPDW-NMSEEEKLKRLMKTLRGP 93
Query: 157 ALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLE 216
A EV+ L + NLS D L A+ VF ++ +T+ KF Q E +V+RLE
Sbjct: 94 AREVMRVLQATNPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEKASLYVIRLE 153
Query: 217 GLLQRAVEKGAVCPALANYLRLQQVLSWARPSE----ALQDTLRGMQLE-KRPPGFLGLL 271
LQ A++ G + AN RLQQ+L S L+D LR E +R P FL L+
Sbjct: 154 VQLQNAIQAGIIAEKDANRTRLQQLLLGGELSRDLRLRLKDFLRMYANEQERLPNFLELI 213
Query: 272 RLIREMEAW-AAF-----PARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDA 325
R++RE E W AF P RS+ V A +PV + A N E +D+
Sbjct: 214 RMVREEEDWDDAFIKRKRPKRSESMVERAVSPVAFQGSPPIVIGSADCNVIEIDDTLDDS 273
Query: 326 AE 327
E
Sbjct: 274 DE 275
>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
Length = 403
Score = 109 bits (272), Expect = 5e-24
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 21/279 (7%)
Query: 97 PVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQLWCHASEREKKRWLLESLGGP 156
P++ A R ++ FS R P +E+FE+W+ ++L W SE EK + L+++L GP
Sbjct: 35 PLVVKMAERNMKLFSGRVVPAQGKETFENWLIQVNEVLPDWS-MSEEEKLKRLMKTLRGP 93
Query: 157 ALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMTSRLKFLTCTQGPQEGLFAFVVRLE 216
A EV+ L + NLS D L A+ VF ++ +T+ KF Q E +V+RLE
Sbjct: 94 AREVMRLLQAANPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEKASLYVIRLE 153
Query: 217 GLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQDTLRGM-----QLEKRPPGFLGLL 271
LQ A++ G + AN RLQQ+L A + L+ L+ + ++R P FL L+
Sbjct: 154 VQLQNAIQAGILAEKDANQTRLQQLLLGAELNRDLRFRLKHLLRMYANKQERLPNFLELI 213
Query: 272 RLIREMEAW-AAF-----PARSQQGVAWAAAPV--ESEDPAAAQASPAQGNASEAGPGAE 323
++IRE E W AF P RS+ + AA+PV + P A ++ N E +
Sbjct: 214 KMIREEEDWDDAFIKRKRPKRSEPIMERAASPVAFQGAQPIAISSADCNCNVIEIDDTLD 273
Query: 324 DAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARPIE 362
D+ E G P G+ARP++
Sbjct: 274 DSDEDVILVVSLYPSLTPTG-------APPFRGRARPLD 305
>gi|156766054 PNMA-like 1 isoform b [Homo sapiens]
Length = 378
Score = 102 bits (253), Expect = 8e-22
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ +L DWCR M + RSLL+ GIP+DC + E +E + LSPLG YRVL K F +E
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVI 92
KAAL+E E +N S IP + PG GG W+V+
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVV 96
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 102 bits (253), Expect = 8e-22
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+ +L DWCR M + RSLL+ GIP+DC + E +E + LSPLG YRVL K F +E
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVI 92
KAAL+E E +N S IP + PG GG W+V+
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVV 96
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 81.3 bits (199), Expect = 1e-15
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
MA+++L+DWCR + +A R+LL+ GIP+ ++ + + ++ L PLG +R+
Sbjct: 1 MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNE 60
Query: 61 GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLPQPVLENRAYRELR 108
A+AALVEF E +N + IP +IPG G W+V++ + + R R++R
Sbjct: 61 KAQAALVEFVEDVNHAAIPREIPGKDGVWRVLWKDR-AQDTRVLRQMR 107
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 296 APVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGL 355
A S + AQASPA A P A+A+ A R +PA P G
Sbjct: 12 ARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASP 71
Query: 356 GQARPIEV-PWGSSPARMSSAVWVFPRGLS 384
G+A P + P +SPAR S A+ R S
Sbjct: 72 GRASPAQASPAQASPARASPALASLSRSSS 101
Score = 33.9 bits (76), Expect = 0.27
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 306 AQASPAQGNASEAGPGAEDAAEAASATKEAARGAPA------AGEGESAPAGPEG----- 354
AQASPA A PG A+A+ A AR +PA + G S+ A
Sbjct: 57 AQASPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSP 116
Query: 355 ----LGQARPI-EVPWGSSPARMSSA 375
L +A P+ VP SSPAR + A
Sbjct: 117 TRVYLVRATPVGAVPIRSSPARSAPA 142
Score = 32.7 bits (73), Expect = 0.61
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 301 EDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQARP 360
E + ASPA+ ++ A P A A+ +PA P G QA P
Sbjct: 2 ERDSHGNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASP 61
Query: 361 IEVPWG-SSPARMSSA 375
P G +SP R S A
Sbjct: 62 AGTPPGRASPGRASPA 77
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 18/138 (13%)
Query: 238 LQQVLSWARPSEA----LQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPAR------- 286
+ Q+ SW P + +Q ++ G EK PP L ++ + +FP +
Sbjct: 432 VSQLSSWKTPEQPDPVWVQSSVSGKG-EKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLK 490
Query: 287 ----SQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAA 342
+ +A AAA + AAA A+PA A+ A P AA AA A AA APA
Sbjct: 491 RPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPAL--AAAAAPALAAAAAPAPAP 548
Query: 343 GEGESAPAGPEGLGQARP 360
+ A P A P
Sbjct: 549 AAAPAVAAAPAAAASAAP 566
Score = 31.6 bits (70), Expect = 1.4
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 279 AWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARG 338
A AA A +A AAAP AA A+PA A+ P A A+A AA
Sbjct: 510 AAAAAAAAPAPALAAAAAPA-----LAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASA 564
Query: 339 APAAGEGESAP 349
AP+ + S P
Sbjct: 565 APSHSQKPSVP 575
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 39.3 bits (90), Expect = 0.007
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 284 PARSQQGVAWAAAPVESEDPAAAQASPAQGNA-SEAGPGAEDAAEAASATKEAARGAPAA 342
PA + A + VE + A AS A A S AGPGA EAA A + AA A +A
Sbjct: 250 PASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSA 309
Query: 343 GEGESAPAGPEGLGQARPIE 362
S A PE +A P E
Sbjct: 310 CAAPSQEAQPECSPEAPPAE 329
Score = 38.5 bits (88), Expect = 0.011
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 281 AAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAP 340
AA P+ +++G AAA E+ + +PA+G A+E PG+ AAE +A+ ++ +P
Sbjct: 79 AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAE--PGSPTAAEGEAASAASSTSSP 136
Query: 341 AAGEG 345
A +G
Sbjct: 137 KAEDG 141
Score = 38.5 bits (88), Expect = 0.011
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 299 ESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPEGLGQA 358
E+ + A+A A+G EA G A AA+A AA G AA GE A AG EG
Sbjct: 177 EAGEGGEAEAPAAEGGKDEAAGG----AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGG 232
Query: 359 RPIE 362
P E
Sbjct: 233 DPQE 236
Score = 37.4 bits (85), Expect = 0.025
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 282 AFPARSQQGV-----AWAAAPV-ESEDPAAAQASPAQGNASEAG-PGAEDAAEA------ 328
A PA ++ G A +AP + E+PAAA + A +A+E G P A A EA
Sbjct: 45 ASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVE 104
Query: 329 --ASATKEAAR-GAPAAGEGESAPA 350
A A EAA G+P A EGE+A A
Sbjct: 105 KEAPAEGEAAEPGSPTAAEGEAASA 129
Score = 31.6 bits (70), Expect = 1.4
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 284 PARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARG-APAA 342
PA + G A +A + E AAA + P +AAE S T AA G A +A
Sbjct: 72 PAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT--AAEGEAASA 129
Query: 343 GEGESAPAGPEGLGQARPIEVP 364
S+P +G + E P
Sbjct: 130 ASSTSSPKAEDGATPSPSNETP 151
Score = 30.4 bits (67), Expect = 3.0
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 290 GVAWAAAPVESEDPAA--AQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGES 347
G A A A +D AA A A+ A+ A+ A EAA+ + AA G P + +
Sbjct: 182 GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQE 241
Query: 348 APAGPE 353
A PE
Sbjct: 242 AAVAPE 247
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 38.9 bits (89), Expect = 0.009
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 20/145 (13%)
Query: 246 RPSEALQDTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDP-- 303
RP E ++ + K+ G +G L+ E AW P A PV +
Sbjct: 329 RPREDIEGVRIALDAAKKVLGTIGPPALVSETLAWEILP---------QATPVSKQQSQG 379
Query: 304 AAAQASPAQGNASEAGPGAE------DAAEAASATKEAARGAPAAGEGESAPA--GPEGL 355
+ + +PA G + P A+ AA+ ++ + A+ AAG+ ++A GP+
Sbjct: 380 SIGETTPAAGMWTLGTPAADVWILGTPAADVWTSMEAASGEGSAAGDLDAATGDRGPQAT 439
Query: 356 GQARPIEVPWGSSPARMSSAVWVFP 380
P PWG P + SS FP
Sbjct: 440 LSQTPAVGPWG-PPGKESSVKRTFP 463
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 38.5 bits (88), Expect = 0.011
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 269 GLLRLIREMEAWAA---FPARSQQGVAW--AAAPVESEDPAA------------AQASPA 311
G R + + W+A P+ + VAW AAAP PAA A A P+
Sbjct: 69 GNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPS 128
Query: 312 QGNASEAGPGAEDAAEAASATKEAARGAPAAGEGESAPAGPE----GLGQARPI-EVPWG 366
+ A P A A +A + A G PAA PA + L A P+ VP
Sbjct: 129 AASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
Query: 367 SSPARMSSA 375
+SPA ++ A
Sbjct: 189 ASPAAVAPA 197
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 38.5 bits (88), Expect = 0.011
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 284 PARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAA--EAASATKEAARGAPA 341
P ++Q A A+ + DPA+A ++ A+ A P +A +A S ++ ++ G P+
Sbjct: 85 PQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPS 144
Query: 342 AGEGESAPA 350
G GE +P+
Sbjct: 145 PGAGEGSPS 153
>gi|27734897 hypothetical protein LOC203111 [Homo sapiens]
Length = 374
Score = 38.5 bits (88), Expect = 0.011
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Query: 258 MQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAA--QASPAQGNA 315
+Q E RPP L L++ E A P + Q A ++ D + + + P +G
Sbjct: 54 VQRESRPP--LQKLKVSAEPTANGVKPLQEQPLAKDVAPGRDATDQSGSTEKTQPGEG-L 110
Query: 316 SEAGP----GAEDAAEAASATKEAARGAPA---AGEGESAPAGPEGLGQ 357
E+GP G EDA A K+A G A G E+ P GPE GQ
Sbjct: 111 EESGPPQPGGKEDAPAAEGKKKDAGAGTEAESLKGNAEAQPLGPEAKGQ 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,424,084
Number of Sequences: 37866
Number of extensions: 953607
Number of successful extensions: 7099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 370
Number of HSP's that attempted gapping in prelim test: 5857
Number of HSP's gapped (non-prelim): 1368
length of query: 409
length of database: 18,247,518
effective HSP length: 105
effective length of query: 304
effective length of database: 14,271,588
effective search space: 4338562752
effective search space used: 4338562752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.