Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169216484
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216484 PREDICTED: similar to transient receptor potential
channel subfamily C member 6 [Homo sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216484 PREDICTED: similar to transient receptor potential ... 617 e-177
gi|5730102 transient receptor potential cation channel, subfamil... 502 e-142
gi|9966865 transient receptor potential cation channel, subfamil... 389 e-108
gi|194733735 transient receptor potential cation channel, subfam... 383 e-106
gi|4507687 transient receptor potential cation channel, subfamil... 383 e-106
gi|239754785 PREDICTED: similar to transient receptor potential ... 301 5e-82
gi|239749299 PREDICTED: similar to transient receptor potential ... 301 5e-82
gi|239743393 PREDICTED: hypothetical protein XP_002342847, parti... 301 5e-82
gi|239509090 PREDICTED: similar to transient receptor potential ... 301 5e-82
gi|209863032 transient receptor potential cation channel, subfam... 200 1e-51
gi|209863030 transient receptor potential cation channel, subfam... 200 1e-51
gi|209863026 transient receptor potential cation channel, subfam... 200 1e-51
gi|209863024 transient receptor potential cation channel, subfam... 200 1e-51
gi|7706747 transient receptor potential cation channel, subfamil... 200 1e-51
gi|6912736 transient receptor potential cation channel, subfamil... 196 3e-50
gi|4507685 transient receptor potential cation channel, subfamil... 155 3e-38
gi|209863028 transient receptor potential cation channel, subfam... 144 1e-34
gi|4505835 polycystin 2 [Homo sapiens] 49 7e-06
gi|116812588 polycystic kidney disease 2-like 2 [Homo sapiens] 47 2e-05
gi|148612863 transient receptor potential cation channel, subfam... 45 1e-04
gi|33598944 polycystic kidney disease 2-like 1 [Homo sapiens] 45 1e-04
gi|22547184 transient receptor potential cation channel, subfami... 41 0.002
gi|22547180 transient receptor potential cation channel, subfami... 41 0.002
gi|4507689 transient receptor potential cation channel, subfamil... 40 0.002
gi|94538366 transient receptor potential cation channel, subfami... 40 0.003
gi|109689695 transient receptor potential cation channel, subfam... 39 0.007
gi|21735483 transient receptor potential cation channel, subfami... 38 0.010
gi|11225266 transient receptor potential cation channel, subfami... 37 0.017
gi|18921093 transient receptor potential cation channel, subfami... 37 0.028
gi|74315354 transient receptor potential cation channel, subfami... 37 0.028
>gi|169216484 PREDICTED: similar to transient receptor potential
channel subfamily C member 6 [Homo sapiens]
Length = 304
Score = 617 bits (1590), Expect = e-177
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MVNLPLLEKNRFNEHRGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRA 60
MVNLPLLEKNRFNEHRGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRA
Sbjct: 1 MVNLPLLEKNRFNEHRGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRA 60
Query: 61 FWHASKAQSITDASDTLKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSF 120
FWHASKAQSITDASDTLKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSF
Sbjct: 61 FWHASKAQSITDASDTLKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSF 120
Query: 121 SGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEA 180
SGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEA
Sbjct: 121 SGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEA 180
Query: 181 FTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMI 240
FTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMI
Sbjct: 181 FTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMI 240
Query: 241 NSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWISEL 300
NSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWISEL
Sbjct: 241 NSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWISEL 300
Query: 301 YPGS 304
YPGS
Sbjct: 301 YPGS 304
>gi|5730102 transient receptor potential cation channel, subfamily
C, member 6 [Homo sapiens]
Length = 931
Score = 502 bits (1293), Expect = e-142
Identities = 250/287 (87%), Positives = 264/287 (91%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAI +ASFIARF AFWHASKAQSI DA+DT
Sbjct: 504 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASKAQSIIDANDT 563
Query: 77 LKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPL 136
LKDLTKVTLGDNVKYY+LAR +WDPSDP+++SEGL A+AVVLSFS IA ILPANESFGPL
Sbjct: 564 LKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPL 623
Query: 137 QMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATF 196
Q+SLG VKDIF+FM+IFIMVFVAFMIGMFNLYSYYI KQNEAFTTVEESFKTLFWA F
Sbjct: 624 QISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTVEESFKTLFWAIF 683
Query: 197 VLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWK 256
LS VKSVVINY+HKFIENIGYVLYGVY+VTMVIVLLNMLIAMINSS QEIEDDADVEWK
Sbjct: 684 GLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWK 743
Query: 257 FARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWISELYPG 303
FARAKLWFS F EGR LPVPFNLVP P SLF LLLKLK WISEL+ G
Sbjct: 744 FARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKKWISELFQG 790
>gi|9966865 transient receptor potential cation channel, subfamily
C, member 7 [Homo sapiens]
Length = 862
Score = 389 bits (1000), Expect = e-108
Identities = 194/278 (69%), Positives = 224/278 (80%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
GMIW+ECKEIW +GP+EY+ LWN+LDFGML+I ASF ARF AF A++AQ D
Sbjct: 449 GMIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFVASFTARFMAFLKATEAQLYVDQHVQ 508
Query: 77 LKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPL 136
L V+L V Y++ AR +W PSDP+++SEGL A+AVVLSFS IA ILPANESFGPL
Sbjct: 509 DDTLHNVSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPL 568
Query: 137 QMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATF 196
Q+SLG VKDIF+FM+IFIMVFVAFMIGMFNLYSYY K N AFTTVEESFKTLFW+ F
Sbjct: 569 QISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKYNPAFTTVEESFKTLFWSIF 628
Query: 197 VLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWK 256
LS V SVV+ Y HKFIENIGYVLYGVY+VTMV+VLLNMLIAMIN+S QEIE+DADVEWK
Sbjct: 629 GLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWK 688
Query: 257 FARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLK 294
FARAKLW S F EGR LP PFNLVP P S + L++++K
Sbjct: 689 FARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIK 726
>gi|194733735 transient receptor potential cation channel, subfamily
C, member 3 isoform a [Homo sapiens]
Length = 921
Score = 383 bits (983), Expect = e-106
Identities = 184/277 (66%), Positives = 226/277 (81%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
GM+W+ECKE+W +GP+EY+ +LWN+LDFGML+I A+F ARF AF A+KAQ D+
Sbjct: 520 GMMWSECKELWLEGPREYILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQ 579
Query: 77 LKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPL 136
DL++VTL ++Y++ AR +W PSDP+++SEGL A+AVVLSFS IA ILPANESFGPL
Sbjct: 580 ESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPL 639
Query: 137 QMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATF 196
Q+SLG VKDIF+FM++FIMVF AFMIGMF LYSYY+ K N AFTTVEESFKTLFW+ F
Sbjct: 640 QISLGRTVKDIFKFMVLFIMVFFAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIF 699
Query: 197 VLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWK 256
LS V SVV+ Y HKFIENIGYVLYG+Y+VTMV+VLLNMLIAMINSS QEIEDD+DVEWK
Sbjct: 700 GLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWK 759
Query: 257 FARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKL 293
FAR+KLW S F +G+ LP PF+LVP P S ++++
Sbjct: 760 FARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFIMRI 796
>gi|4507687 transient receptor potential cation channel, subfamily
C, member 3 isoform b [Homo sapiens]
Length = 848
Score = 383 bits (983), Expect = e-106
Identities = 184/277 (66%), Positives = 226/277 (81%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
GM+W+ECKE+W +GP+EY+ +LWN+LDFGML+I A+F ARF AF A+KAQ D+
Sbjct: 447 GMMWSECKELWLEGPREYILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQ 506
Query: 77 LKDLTKVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPL 136
DL++VTL ++Y++ AR +W PSDP+++SEGL A+AVVLSFS IA ILPANESFGPL
Sbjct: 507 ESDLSEVTLPPEIQYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPL 566
Query: 137 QMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATF 196
Q+SLG VKDIF+FM++FIMVF AFMIGMF LYSYY+ K N AFTTVEESFKTLFW+ F
Sbjct: 567 QISLGRTVKDIFKFMVLFIMVFFAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIF 626
Query: 197 VLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWK 256
LS V SVV+ Y HKFIENIGYVLYG+Y+VTMV+VLLNMLIAMINSS QEIEDD+DVEWK
Sbjct: 627 GLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWK 686
Query: 257 FARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKL 293
FAR+KLW S F +G+ LP PF+LVP P S ++++
Sbjct: 687 FARSKLWLSYFDDGKTLPPPFSLVPSPKSFVYFIMRI 723
>gi|239754785 PREDICTED: similar to transient receptor potential
cation channel, subfamily C, member 6, partial [Homo
sapiens]
Length = 182
Score = 301 bits (771), Expect = 5e-82
Identities = 147/164 (89%), Positives = 155/164 (94%)
Query: 22 ECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDTLKDLT 81
ECKEIWTQGPKEYLFELWNMLDFGML I +A FIARFRAFWHASKAQSI DA+DTLKDLT
Sbjct: 4 ECKEIWTQGPKEYLFELWNMLDFGMLVIFTALFIARFRAFWHASKAQSIIDANDTLKDLT 63
Query: 82 KVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPLQMSLG 141
+VTLGDNVKYY+LARREW PSDP +VSEGLCAVAVVLSFSGIACILPANESFGPLQ SLG
Sbjct: 64 EVTLGDNVKYYNLARREWVPSDPWVVSEGLCAVAVVLSFSGIACILPANESFGPLQTSLG 123
Query: 142 GAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVE 185
GAVKDIFRFM+IFIMVFVAFMIGMFNLYSYYI KQNEAFTT++
Sbjct: 124 GAVKDIFRFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTLK 167
>gi|239749299 PREDICTED: similar to transient receptor potential
cation channel, subfamily C, member 6, partial [Homo
sapiens]
Length = 182
Score = 301 bits (771), Expect = 5e-82
Identities = 147/164 (89%), Positives = 155/164 (94%)
Query: 22 ECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDTLKDLT 81
ECKEIWTQGPKEYLFELWNMLDFGML I +A FIARFRAFWHASKAQSI DA+DTLKDLT
Sbjct: 4 ECKEIWTQGPKEYLFELWNMLDFGMLVIFTALFIARFRAFWHASKAQSIIDANDTLKDLT 63
Query: 82 KVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPLQMSLG 141
+VTLGDNVKYY+LARREW PSDP +VSEGLCAVAVVLSFSGIACILPANESFGPLQ SLG
Sbjct: 64 EVTLGDNVKYYNLARREWVPSDPWVVSEGLCAVAVVLSFSGIACILPANESFGPLQTSLG 123
Query: 142 GAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVE 185
GAVKDIFRFM+IFIMVFVAFMIGMFNLYSYYI KQNEAFTT++
Sbjct: 124 GAVKDIFRFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTLK 167
>gi|239743393 PREDICTED: hypothetical protein XP_002342847, partial
[Homo sapiens]
Length = 182
Score = 301 bits (771), Expect = 5e-82
Identities = 147/164 (89%), Positives = 155/164 (94%)
Query: 22 ECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDTLKDLT 81
ECKEIWTQGPKEYLFELWNMLDFGML I +A FIARFRAFWHASKAQSI DA+DTLKDLT
Sbjct: 4 ECKEIWTQGPKEYLFELWNMLDFGMLVIFTALFIARFRAFWHASKAQSIIDANDTLKDLT 63
Query: 82 KVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPLQMSLG 141
+VTLGDNVKYY+LARREW PSDP +VSEGLCAVAVVLSFSGIACILPANESFGPLQ SLG
Sbjct: 64 EVTLGDNVKYYNLARREWVPSDPWVVSEGLCAVAVVLSFSGIACILPANESFGPLQTSLG 123
Query: 142 GAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVE 185
GAVKDIFRFM+IFIMVFVAFMIGMFNLYSYYI KQNEAFTT++
Sbjct: 124 GAVKDIFRFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTLK 167
>gi|239509090 PREDICTED: similar to transient receptor potential
cation channel, subfamily C, member 6, partial [Homo
sapiens]
Length = 182
Score = 301 bits (771), Expect = 5e-82
Identities = 147/164 (89%), Positives = 155/164 (94%)
Query: 22 ECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDTLKDLT 81
ECKEIWTQGPKEYLFELWNMLDFGML I +A FIARFRAFWHASKAQSI DA+DTLKDLT
Sbjct: 4 ECKEIWTQGPKEYLFELWNMLDFGMLVIFTALFIARFRAFWHASKAQSIIDANDTLKDLT 63
Query: 82 KVTLGDNVKYYSLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPLQMSLG 141
+VTLGDNVKYY+LARREW PSDP +VSEGLCAVAVVLSFSGIACILPANESFGPLQ SLG
Sbjct: 64 EVTLGDNVKYYNLARREWVPSDPWVVSEGLCAVAVVLSFSGIACILPANESFGPLQTSLG 123
Query: 142 GAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVE 185
GAVKDIFRFM+IFIMVFVAFMIGMFNLYSYYI KQNEAFTT++
Sbjct: 124 GAVKDIFRFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAFTTLK 167
>gi|209863032 transient receptor potential cation channel, subfamily
C, member 4 isoform zeta [Homo sapiens]
Length = 804
Score = 200 bits (509), Expect = 1e-51
Identities = 110/286 (38%), Positives = 160/286 (55%), Gaps = 39/286 (13%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 239 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 283
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 284 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 331
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 332 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 391
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 392 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 451
Query: 245 QEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLL 290
Q I D AD+EWKFAR KLW S F EG LP PFN++P P SL+ L+
Sbjct: 452 QLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLI 497
>gi|209863030 transient receptor potential cation channel, subfamily
C, member 4 isoform delta [Homo sapiens]
Length = 836
Score = 200 bits (509), Expect = 1e-51
Identities = 110/286 (38%), Positives = 160/286 (55%), Gaps = 39/286 (13%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 412 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 456
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 457 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 564
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 565 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 624
Query: 245 QEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLL 290
Q I D AD+EWKFAR KLW S F EG LP PFN++P P SL+ L+
Sbjct: 625 QLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLI 670
>gi|209863026 transient receptor potential cation channel, subfamily
C, member 4 isoform beta [Homo sapiens]
Length = 893
Score = 200 bits (509), Expect = 1e-51
Identities = 110/286 (38%), Positives = 160/286 (55%), Gaps = 39/286 (13%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 412 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 456
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 457 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 564
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 565 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 624
Query: 245 QEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLL 290
Q I D AD+EWKFAR KLW S F EG LP PFN++P P SL+ L+
Sbjct: 625 QLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLI 670
>gi|209863024 transient receptor potential cation channel, subfamily
C, member 4 isoform epsilon [Homo sapiens]
Length = 982
Score = 200 bits (509), Expect = 1e-51
Identities = 110/286 (38%), Positives = 160/286 (55%), Gaps = 39/286 (13%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 412 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 456
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 457 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 564
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 565 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 624
Query: 245 QEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLL 290
Q I D AD+EWKFAR KLW S F EG LP PFN++P P SL+ L+
Sbjct: 625 QLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLI 670
>gi|7706747 transient receptor potential cation channel, subfamily
C, member 4 isoform alpha [Homo sapiens]
Length = 977
Score = 200 bits (509), Expect = 1e-51
Identities = 110/286 (38%), Positives = 160/286 (55%), Gaps = 39/286 (13%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 412 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 456
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 457 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 564
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 565 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 624
Query: 245 QEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLL 290
Q I D AD+EWKFAR KLW S F EG LP PFN++P P SL+ L+
Sbjct: 625 QLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLI 670
>gi|6912736 transient receptor potential cation channel, subfamily
C, member 5 [Homo sapiens]
Length = 973
Score = 196 bits (497), Expect = 3e-50
Identities = 112/300 (37%), Positives = 161/300 (53%), Gaps = 46/300 (15%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E KE+W G EY+ + WN++DF M ++ A+ + A+
Sbjct: 413 GFIWGEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAY--------------- 457
Query: 77 LKDLTKVTLGDNVKYY-SLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY S R EW+ P +++E L A++ +LS + + AN GP
Sbjct: 458 ------------VKYNGSRPREEWEMWHPTLIAEALFAISNILSSLRLISLFTANSHLGP 505
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYY----IDV----------KQNEAF 181
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY ID KQN AF
Sbjct: 506 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETRAIDEPNNCKGIRCEKQNNAF 565
Query: 182 TTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMIN 241
+T+ E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N
Sbjct: 566 STLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMN 625
Query: 242 SSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWISELY 301
+S Q I D AD+EWKFAR KLW S F EG LP PFN++P P S L L W + +
Sbjct: 626 NSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKS----FLYLGNWFNNTF 681
>gi|4507685 transient receptor potential cation channel, subfamily
C, member 1 [Homo sapiens]
Length = 759
Score = 155 bits (393), Expect = 3e-38
Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 43/297 (14%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
GMIW++ K +W +G +++L E N L F M ++ A+F + A
Sbjct: 399 GMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVA---------------- 442
Query: 77 LKDLTKVTLGDNVKYYSLA-RREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
+ K++ A R++WD P +V+EGL A A VLS+ + + + GP
Sbjct: 443 -----------HNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGP 491
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLY-------------SYYIDVKQNEAFT 182
LQ+S+G ++D +F+ +F++V +F IG+ LY + + + N+ F
Sbjct: 492 LQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFH 551
Query: 183 TVEESFKTLFWATFVLSAVKSVV--INYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMI 240
+ + LFW F L+ V V +Y + +G V+ G Y+V +VIVL +L+AM+
Sbjct: 552 SFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAML 611
Query: 241 NSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLKLKGWI 297
+ S Q I + D EWKFARAKLW S F + LP PFN++P P ++ ++ L WI
Sbjct: 612 HKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWI 668
>gi|209863028 transient receptor potential cation channel, subfamily
C, member 4 isoform gamma [Homo sapiens]
Length = 828
Score = 144 bits (362), Expect = 1e-34
Identities = 84/243 (34%), Positives = 129/243 (53%), Gaps = 39/243 (16%)
Query: 17 GMIWAECKEIWTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDT 76
G IW E K++W G ++Y+ + WN++DF M ++ A+ + AF
Sbjct: 412 GFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAF--------------- 456
Query: 77 LKDLTKVTLGDNVKYYSLARRE-WDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGP 135
VKY +L RE WD P +V+E L A+A + S + + AN GP
Sbjct: 457 ------------VKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504
Query: 136 LQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK-----------QNEAFTTV 184
LQ+SLG + DI +F+ I+ +V +AF G+ LY YY + K QN AF+T+
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTL 564
Query: 185 EESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSL 244
E+ ++LFW+ F L + + H+F E +G ++G Y+V ++VLLNMLIAM+N+S
Sbjct: 565 FETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSY 624
Query: 245 QEI 247
Q I
Sbjct: 625 QLI 627
>gi|4505835 polycystin 2 [Homo sapiens]
Length = 968
Score = 48.5 bits (114), Expect = 7e-06
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 111 LCAVAVVLSFSGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYS 170
+ AV V + + + N + L ++ KD+F F ++F ++F+A+ +
Sbjct: 561 IAAVTVFFVWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFLAYA-----QLA 615
Query: 171 YYIDVKQNEAFTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVI 230
Y + Q + F+T +E T F +L + I +++ +G + + + M
Sbjct: 616 YLVFGTQVDDFSTFQECIFTQF--RIILGDINFAEIEEANRV---LGPIYFTTFVFFMFF 670
Query: 231 VLLNMLIAMINSSLQEIEDD 250
+LLNM +A+IN + E++ D
Sbjct: 671 ILLNMFLAIINDTYSEVKSD 690
>gi|116812588 polycystic kidney disease 2-like 2 [Homo sapiens]
Length = 613
Score = 47.4 bits (111), Expect = 2e-05
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 34 YLFELWNMLDFGMLAILSASFIA-RFRAFWHASKAQSITDASDTLKDLTKVTLGDNVKYY 92
Y +WN L+ L +L F+A F +++ Q LK K + +Y
Sbjct: 311 YFKSIWNWLE---LLLLLLCFVAVSFNTYYNV---QIFLLLGQLLKSTEKYS-----DFY 359
Query: 93 SLARREWDPSDPRMVSEGLCAVAVVLSFSGIACILPANESFGPLQMSLGGAVKDIFRFML 152
LA W + + A+ + ++ I + N++ L +L VKDI F +
Sbjct: 360 FLAC--W-----HIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAI 412
Query: 153 IFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATFVLSAVKSVVINYSHKF 212
+F ++F A+ F ++ +D F+T + S + + + V+ +++
Sbjct: 413 MFFIIFFAYAQLGFLVFGSQVD-----DFSTFQNS---------IFAQFRIVLGDFNFAG 458
Query: 213 IENIGYVLYGVYDVTMVI----VLLNMLIAMINSSLQEIEDDADV 253
I+ +L +Y +T + VLLNM +A+IN + E++ D +
Sbjct: 459 IQQANPILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYSI 503
>gi|148612863 transient receptor potential cation channel, subfamily
M, member 7 [Homo sapiens]
Length = 1865
Score = 44.7 bits (104), Expect = 1e-04
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 127 LPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFN-LYSYYIDVKQNEAFTTVE 185
L N+ GP M +G V ++F ++I +V ++F + LY + + ++T +
Sbjct: 980 LAVNQQAGPYVMMIGKMVANMFYIVVIMALVLLSFGVPRKAILYPH-----EAPSWTLAK 1034
Query: 186 ESFKTLFWATFVLSAVKSVVINYSHKFIENI-------GYVLYGVYDVTMVIVLLNMLIA 238
+ +W F + + + I I L VY I+++N+LIA
Sbjct: 1035 DIVFHPYWMIFGEVYAYEIDVCANDSVIPQICGPGTWLTPFLQAVYLFVQYIIMVNLLIA 1094
Query: 239 MINSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLVPGPGSLFCLLLK 292
N+ +++ +++ WK+ R + + E LP P ++ SLFC + K
Sbjct: 1095 FFNNVYLQVKAISNIVWKYQRYH-FIMAYHEKPVLPPPLIILSHIVSLFCCICK 1147
>gi|33598944 polycystic kidney disease 2-like 1 [Homo sapiens]
Length = 805
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 113 AVAVVLSFSGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYY 172
AV + ++ I + N++ L +L KDI F ++F +VF A+ + L
Sbjct: 443 AVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGFAVMFFIVFFAYAQLGYLL---- 498
Query: 173 IDVKQNEAFTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLYGVYDVTMVI-- 230
F T E+F T F + + ++ ++ + I+N +L Y VT V
Sbjct: 499 --------FGTQVENFSTFIKCIF--TQFRIILGDFDYNAIDNANRILGPAYFVTYVFFV 548
Query: 231 --VLLNMLIAMINSSLQEIEDD 250
VLLNM +A+IN + E++++
Sbjct: 549 FFVLLNMFLAIINDTYSEVKEE 570
>gi|22547184 transient receptor potential cation channel, subfamily
V, member 4 isoform a [Homo sapiens]
Length = 871
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/123 (21%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 145 KDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK------QNEAFTTVEESFKTLFWATFVL 198
KD+FRF+L++++ + + + +L + ++K N T + ++TF+L
Sbjct: 612 KDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFLL 671
Query: 199 SAVKSVVINYSHKFIENIGY-----VLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADV 253
K + + + + Y +L Y + ++LLNMLIA++ ++ ++ ++
Sbjct: 672 DLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKH 731
Query: 254 EWK 256
WK
Sbjct: 732 IWK 734
>gi|22547180 transient receptor potential cation channel, subfamily
V, member 4 isoform b [Homo sapiens]
Length = 811
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/123 (21%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 145 KDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVK------QNEAFTTVEESFKTLFWATFVL 198
KD+FRF+L++++ + + + +L + ++K N T + ++TF+L
Sbjct: 552 KDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFLL 611
Query: 199 SAVKSVVINYSHKFIENIGY-----VLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADV 253
K + + + + Y +L Y + ++LLNMLIA++ ++ ++ ++
Sbjct: 612 DLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKH 671
Query: 254 EWK 256
WK
Sbjct: 672 IWK 674
>gi|4507689 transient receptor potential cation channel, subfamily M,
member 2 [Homo sapiens]
Length = 1503
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 212 FIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWKFARAKLWFSCFGEGR 271
F E + +L +Y + I+LLN+LIAM N + Q++++ D WKF R L G
Sbjct: 1020 FPEWLTVLLLCLYLLFTNILLLNLLIAMFNYTFQQVQEHTDQIWKFQRHDLIEEYHGR-P 1078
Query: 272 ALPVPFNLV 280
A P PF L+
Sbjct: 1079 AAPPPFILL 1087
>gi|94538366 transient receptor potential cation channel, subfamily M,
member 1 [Homo sapiens]
Length = 1603
Score = 40.0 bits (92), Expect = 0.003
Identities = 38/203 (18%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 114 VAVVLSFSGIACILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYI 173
V ++ + + I N+ GP M +G + D+ F++I ++V ++F + + +
Sbjct: 933 VDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAI----L 988
Query: 174 DVKQNEAFTTVEESFKTLFWATFVLSAVKSVVINYSHKFIENIGYVLY------------ 221
++ ++ F +W + + + Y+ + G LY
Sbjct: 989 HPEEKPSWKLARNIFYMPYWMIYGEVFADQIDL-YAMEINPPCGENLYDEEGKRLPPCIP 1047
Query: 222 ---------GVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWKFARAKLWFSCFGEGRA 272
Y + I+L+N+LIA+ N++ E++ ++ WKF R +L F +
Sbjct: 1048 GAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQL-IMTFHDRPV 1106
Query: 273 LPVPFNLVPGPGSLFCLLLKLKG 295
LP P ++ ++ ++++L G
Sbjct: 1107 LPPPMIIL---SHIYIIIMRLSG 1126
>gi|109689695 transient receptor potential cation channel, subfamily
M, member 8 [Homo sapiens]
Length = 1104
Score = 38.5 bits (88), Expect = 0.007
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 126 ILPANESFGPLQMSLGGAVKDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAF---- 181
I + + GP + L + D+F F+ +F + VAF + + ++QNE
Sbjct: 846 IFTVSRNLGPKIIMLQRMLIDVFFFLFLFAVWMVAFGVARQGI------LRQNEQRWRWI 899
Query: 182 --TTVEESFKTLFWATFVLSAVKSVVINYSH---------------------KFIENIGY 218
+ + E + +F V S V +++H +F E I
Sbjct: 900 FRSVIYEPYLAMFGQ--VPSDVDGTTYDFAHCTFTGNESKPLCVELDEHNLPRFPEWITI 957
Query: 219 VLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWKFAR 259
L +Y ++ I+L+N+L+AM ++ ++++ D WKF R
Sbjct: 958 PLVCIYMLSTNILLVNLLVAMFGYTVGTVQENNDQVWKFQR 998
>gi|21735483 transient receptor potential cation channel, subfamily
V, member 3 [Homo sapiens]
Length = 790
Score = 38.1 bits (87), Expect = 0.010
Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 146 DIFRFMLIFIMVFVAFMIGMFNLYSYYI-DVKQNEAFTTVEESFKTLFWATFVLSAVKSV 204
D+ +F+ ++I+ + F + + +L D K ++ + ++ LF T L +
Sbjct: 586 DVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN-- 643
Query: 205 VINYSHKFIENIGYVLYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWKFARAK 261
I + K+ ++L Y + ++LLNMLIA++ +++ + +++ W+ RA+
Sbjct: 644 -IQQNSKYPILFLFLLI-TYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRAR 698
>gi|11225266 transient receptor potential cation channel, subfamily M,
member 5 [Homo sapiens]
Length = 1165
Score = 37.4 bits (85), Expect = 0.017
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 230 IVLLNMLIAMINSSLQEIEDDADVEWKFARAKLWFSCFGEGRALPVPFNLV 280
++L+N+LIAM + + Q ++ +AD+ WKF R L + E AL PF L+
Sbjct: 968 VLLMNLLIAMFSYTFQVVQGNADMFWKFQRYNLIVE-YHERPALAPPFILL 1017
>gi|18921093 transient receptor potential cation channel, subfamily M,
member 6 [Homo sapiens]
Length = 2022
Score = 36.6 bits (83), Expect = 0.028
Identities = 46/265 (17%), Positives = 97/265 (36%), Gaps = 53/265 (20%)
Query: 27 WTQGPKEYLFELWNMLDFGMLAILSASFIARFRAFWHASKAQSITDASDTLKDLTKVTLG 86
+TQ K ++ E WN+ + + + SA F+ R+
Sbjct: 898 FTQKVKVWISEYWNLTETVAIGLFSAGFVLRW---------------------------- 929
Query: 87 DNVKYYSLARREWDPSDPRMVSEG--LCAVAVVLSFSGIACILPANESFGPLQMSLGGAV 144
DP + G + + ++ FS + N+ GP +
Sbjct: 930 ---------------GDPPFHTAGRLIYCIDIIFWFSRLLDFFAVNQHAGPYVTMIAKMT 974
Query: 145 KDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTVEESFKTLFWATFVLSAVKSV 204
++F ++I +V ++F + + S K+ +++ + +W + +
Sbjct: 975 ANMFYIVIIMAIVLLSFGVARKAILS----PKEPPSWSLARDIVFEPYWMIYGEVYAGEI 1030
Query: 205 VINYSHKFIENIGYV---LYGVYDVTMVIVLLNMLIAMINSSLQEIEDDADVEWKFARAK 261
+ S ++ L VY I+++N+LIA N+ ++E ++ WK+ R +
Sbjct: 1031 DVCSSQPSCPPGSFLTPFLQAVYLFVQYIIMVNLLIAFFNNVYLDMESISNNLWKYNRYR 1090
Query: 262 LWFSCFGEGRALPVPFNLVPGPGSL 286
+ + E LP P L+ G L
Sbjct: 1091 -YIMTYHEKPWLPPPLILLSHVGLL 1114
>gi|74315354 transient receptor potential cation channel, subfamily
V, member 1 [Homo sapiens]
Length = 839
Score = 36.6 bits (83), Expect = 0.028
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 145 KDIFRFMLIFIMVFVAFMIGMFNLYSYYIDVKQNEAFTTV--------------EESFKT 190
K I R + F+ V++ F+ G I+ +N++ + + S+ +
Sbjct: 571 KMILRDLCRFMFVYIVFLFGFSTAVVTLIEDGKNDSLPSESTSHRWRGPACRPPDSSYNS 630
Query: 191 LFWATFVLSAVKSVVINYSHKFIENIGY-----VLYGVYDVTMVIVLLNMLIAMINSSLQ 245
L+ + L K + +F EN + +L Y + I+LLNMLIA++ ++
Sbjct: 631 LY--STCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVN 688
Query: 246 EIEDDADVEWKFARA 260
+I ++ WK RA
Sbjct: 689 KIAQESKNIWKLQRA 703
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,931,295
Number of Sequences: 37866
Number of extensions: 440155
Number of successful extensions: 1394
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1323
Number of HSP's gapped (non-prelim): 59
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.