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Search of human proteins with 169216446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169216446 PREDICTED: similar to integrator complex subunit 6
[Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169216446 PREDICTED: similar to integrator complex subunit 6 ... 363 e-101
gi|239757918 PREDICTED: cancer/testis antigen family 45, member ... 351 2e-97
gi|56090473 cancer/testis antigen family 45, member A5 [Homo sap... 342 8e-95
gi|124486720 cancer/testis antigen CT45 [Homo sapiens] 322 1e-88
gi|62945406 cancer/testis antigen family 45, member A3 [Homo sap... 320 4e-88
gi|62945408 cancer/testis antigen family 45, member A4 [Homo sap... 319 7e-88
gi|62945410 cancer/testis antigen family 45, member A6 [Homo sap... 319 7e-88
gi|62899069 cancer/testis antigen family 45, member A1 [Homo sap... 318 2e-87
gi|94536743 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B [Ho... 120 8e-28
gi|145580597 sarcoma antigen 1 [Homo sapiens] 92 2e-19
gi|239757916 PREDICTED: SAGE1-like protein-like [Homo sapiens] 83 1e-16
gi|239752427 PREDICTED: SAGE1-like protein-like [Homo sapiens] 83 1e-16
gi|239746945 PREDICTED: SAGE1-like protein-like [Homo sapiens] 79 3e-15
gi|90193622 integrator complex subunit 6 isoform b [Homo sapiens] 61 6e-10
gi|11024694 integrator complex subunit 6 isoform a [Homo sapiens] 61 6e-10
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 34 0.078
gi|119226220 membrane-spanning 4-domains, subfamily A, member 14... 30 1.5
gi|119226217 membrane-spanning 4-domains, subfamily A, member 14... 30 1.5
gi|33469919 minichromosome maintenance complex component 4 [Homo... 29 1.9
gi|33469917 minichromosome maintenance complex component 4 [Homo... 29 1.9
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 29 2.5
gi|45580688 complement component 7 precursor [Homo sapiens] 28 3.3
gi|80861486 granule cell antiserum positive 14 [Homo sapiens] 28 4.3
gi|126723564 pecanex-like 1 [Homo sapiens] 28 5.6
gi|118150678 epithelial cell transforming sequence 2 oncogene-li... 28 5.6
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 28 5.6
gi|222136619 myxovirus resistance protein 1 [Homo sapiens] 27 9.6
gi|222136617 myxovirus resistance protein 1 [Homo sapiens] 27 9.6
gi|150418009 transforming, acidic coiled-coil containing protein... 27 9.6
gi|45827755 transforming, acidic coiled-coil containing protein ... 27 9.6
>gi|169216446 PREDICTED: similar to integrator complex subunit 6
[Homo sapiens]
Length = 181
Score = 363 bits (931), Expect = e-101
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF
Sbjct: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|239757918 PREDICTED: cancer/testis antigen family 45, member A6
[Homo sapiens]
Length = 182
Score = 351 bits (901), Expect = 2e-97
Identities = 177/182 (97%), Positives = 179/182 (98%), Gaps = 1/182 (0%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEK-KLM 59
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSA K++ KLM
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSACPKKRVKLM 60
Query: 60 TGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQ 119
TGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQ
Sbjct: 61 TGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQ 120
Query: 120 QEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQ 179
QEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQ
Sbjct: 121 QEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQ 180
Query: 180 FL 181
FL
Sbjct: 181 FL 182
>gi|56090473 cancer/testis antigen family 45, member A5 [Homo
sapiens]
Length = 189
Score = 342 bits (878), Expect = 8e-95
Identities = 173/181 (95%), Positives = 175/181 (96%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|124486720 cancer/testis antigen CT45 [Homo sapiens]
Length = 189
Score = 322 bits (824), Expect = 1e-88
Identities = 163/181 (90%), Positives = 171/181 (94%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKD MMQKPGSNAPVGGNVTS+FSGDDLECR ASSPKSQQ
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQQ 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIK ++VKE+RC+G+KYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|62945406 cancer/testis antigen family 45, member A3 [Homo
sapiens]
Length = 189
Score = 320 bits (820), Expect = 4e-88
Identities = 162/181 (89%), Positives = 171/181 (94%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKD MMQKPGSNAPVGGNVTS+FSGDDLECR ASSPKSQ+
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQR 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIK ++VKE+RC+G+KYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|62945408 cancer/testis antigen family 45, member A4 [Homo
sapiens]
Length = 189
Score = 319 bits (818), Expect = 7e-88
Identities = 162/181 (89%), Positives = 170/181 (93%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSK KKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKD MMQKPGSNAPVGGNVTS+FSGDDLECR ASSPKSQQ
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQQ 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIK ++VKE+RC+G+KYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|62945410 cancer/testis antigen family 45, member A6 [Homo
sapiens]
Length = 189
Score = 319 bits (818), Expect = 7e-88
Identities = 162/181 (89%), Positives = 170/181 (93%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSK KKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKD MMQKPGSNAPVGGNVTS+FSGDDLECR ASSPKSQQ
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQQ 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIK ++VKE+RC+G+KYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|62899069 cancer/testis antigen family 45, member A1 [Homo
sapiens]
Length = 189
Score = 318 bits (814), Expect = 2e-87
Identities = 161/181 (88%), Positives = 170/181 (93%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMT 60
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSK KKLMT
Sbjct: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMT 60
Query: 61 GHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQ 120
GHAIPPSQLDSQIDDFTGFSKD MMQKPGSNAPVGGNVTS+FSGDDLECR ASSPKSQ+
Sbjct: 61 GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQR 120
Query: 121 EINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQF 180
EINADIK ++VKE+RC+G+KYEKIFEMLEGVQGPTAVRKRFFESIIKEAAR + V+
Sbjct: 121 EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|94536743 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B [Homo
sapiens]
Length = 861
Score = 120 bits (300), Expect = 8e-28
Identities = 89/244 (36%), Positives = 118/244 (48%), Gaps = 64/244 (26%)
Query: 1 MTDKTEKVAVDPETVFKRPRECDSPSYQKRQR-MALLARKQ-----------GAG----- 43
M D+ ++ P+ KRP E +SP KR+R M+LL RK G G
Sbjct: 594 MIDEADEFVAGPQNKVKRPGEPNSPMSSKRRRSMSLLLRKPQTPPTVTNHVGGKGPPSAS 653
Query: 44 ------------------------------------DSLIAGSAMSKEKKLMTGHAIPPS 67
D ++ SA S E MTG +PP+
Sbjct: 654 WFPSYPNLIKPTLVHTDATIIHDGHEEKMENGQITPDGFLSKSAPS-ELINMTGDLMPPN 712
Query: 68 QLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLEC----------RGIASSPK 117
Q+DS DDFT SKDG++QKPGSNA VGG + S DD + + +P
Sbjct: 713 QVDSLSDDFTSLSKDGLIQKPGSNAFVGGAKNCSLSVDDQKDPVASTLGAMPNTLQITPA 772
Query: 118 SQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGT 177
Q INADIK Q++KE+R GRKYE+IF +LE VQGP ++K+F E IKEAAR+
Sbjct: 773 MAQGINADIKHQLMKEVRKFGRKYERIFILLEEVQGPLEMKKQFVEFTIKEAARFKRRVL 832
Query: 178 VQFL 181
+Q+L
Sbjct: 833 IQYL 836
>gi|145580597 sarcoma antigen 1 [Homo sapiens]
Length = 904
Score = 92.0 bits (227), Expect = 2e-19
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 59 MTGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIAS---- 114
MTGH +PP+ LDS DFT SKD ++ KP SN G + S D ++
Sbjct: 750 MTGHCMPPNALDSFSHDFTSLSKDELLYKPDSNEFAVGTKNYSVSAGDPPVTVMSLVETV 809
Query: 115 ------SPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKE 168
SP ++IN DIK Q++KE+R G+ YE+IF +LE VQG V+++F E IKE
Sbjct: 810 PNTPQISPAMAKKINDDIKYQLMKEVRRFGQNYERIFILLEEVQGSMKVKRQFVEFTIKE 869
Query: 169 AARWVEIGTVQFL 181
AAR+ ++ +Q L
Sbjct: 870 AARFKKVVLIQQL 882
>gi|239757916 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 944
Score = 82.8 bits (203), Expect = 1e-16
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 59 MTGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIAS---- 114
MT +P + LDS DFT S++ ++ K SN G + S D ++S
Sbjct: 462 MTEDCMPLNALDSFSYDFTSLSREELLYKHDSNEFAVGTKNYSVSAGDPPVTAMSSVETP 521
Query: 115 --SPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARW 172
SP ++IN DIKCQ++KE++ G+ Y++IF +LE +QG V+++FFE I+EAAR+
Sbjct: 522 QISPAMAKKINQDIKCQLMKEVQRFGQNYKRIFILLEELQGSMKVKRQFFEFTIREAARF 581
Query: 173 VEIGTVQFL 181
++ +Q L
Sbjct: 582 KKVALIQQL 590
>gi|239752427 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 944
Score = 82.8 bits (203), Expect = 1e-16
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 59 MTGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIAS---- 114
MT +P + LDS DFT S++ ++ K SN G + S D ++S
Sbjct: 462 MTEDCMPLNALDSFSYDFTSLSREELLYKHDSNEFAVGTKNYSVSAGDPPVTAMSSVETP 521
Query: 115 --SPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARW 172
SP ++IN DIKCQ++KE++ G+ Y++IF +LE +QG V+++FFE I+EAAR+
Sbjct: 522 QISPAMAKKINQDIKCQLMKEVQRFGQNYKRIFILLEELQGSMKVKRQFFEFTIREAARF 581
Query: 173 VEIGTVQFL 181
++ +Q L
Sbjct: 582 KKVALIQQL 590
>gi|239746945 PREDICTED: SAGE1-like protein-like [Homo sapiens]
Length = 990
Score = 78.6 bits (192), Expect = 3e-15
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
Query: 59 MTGHAIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIAS---- 114
MT +P + LDS DFT S++ ++ K SN G + S D ++S
Sbjct: 462 MTEDCMPLNALDSFSYDFTSLSREELLYKHDSNEFAVGTKNYSVSAGDPPVTAMSSVETP 521
Query: 115 --SPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARW 172
SP ++IN DIKCQ++KE++ G+ Y++IF +LE +QG V+++F E I+EA R+
Sbjct: 522 QISPAMAKKINQDIKCQLMKEVQRFGQNYKRIFILLEELQGSMKVKRQFVEFTIREAVRF 581
Query: 173 VEIGTVQFL 181
++ +Q L
Sbjct: 582 KKVALIQQL 590
>gi|90193622 integrator complex subunit 6 isoform b [Homo sapiens]
Length = 874
Score = 60.8 bits (146), Expect = 6e-10
Identities = 27/56 (48%), Positives = 42/56 (75%)
Query: 117 KSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARW 172
+S +E+N ++K Q++KEIR GRKYE+IF +L+ VQG R F +++IKEA+R+
Sbjct: 790 RSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRF 845
>gi|11024694 integrator complex subunit 6 isoform a [Homo sapiens]
Length = 887
Score = 60.8 bits (146), Expect = 6e-10
Identities = 27/56 (48%), Positives = 42/56 (75%)
Query: 117 KSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARW 172
+S +E+N ++K Q++KEIR GRKYE+IF +L+ VQG R F +++IKEA+R+
Sbjct: 803 RSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRF 858
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 33.9 bits (76), Expect = 0.078
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 2 TDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTG 61
T KTE+ A+ +T+ + + C S Q Q +L + + +MS +KK T
Sbjct: 216 THKTEEAAITKKTLSLKKKMCASQRKQSCQEESLAVQDVNMEEDSFFMESMSFKKKPKTE 275
Query: 62 HAIPPSQLDSQIDDFTGFSKDGMMQKP 88
+IP +L S T + K +KP
Sbjct: 276 ESIPTHKLSSLKKKCTIYGKICHFRKP 302
>gi|119226220 membrane-spanning 4-domains, subfamily A, member 14
isoform 2 [Homo sapiens]
Length = 662
Score = 29.6 bits (65), Expect = 1.5
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 5 TEKVAVDPETVFKRPRECDSPS--YQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGH 62
+E +++ ++ FK+ ++ D S Q Q L + Q A + + K +
Sbjct: 243 SENMSIQLDSTFKQMKDEDLQSAIVQPSQMQTKLLQDQAASLQVFPSHSALKLED----- 297
Query: 63 AIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQEI 122
I P L SQ G S+ M K S+ +SN + +DL +GI S S Q++
Sbjct: 298 -ISPEDLPSQALPVEGLSEQTMPSKSTSSHV---KQSSNLTANDLPPQGILSQDTSSQDM 353
>gi|119226217 membrane-spanning 4-domains, subfamily A, member 14
isoform 1 [Homo sapiens]
Length = 679
Score = 29.6 bits (65), Expect = 1.5
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 5 TEKVAVDPETVFKRPRECDSPS--YQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGH 62
+E +++ ++ FK+ ++ D S Q Q L + Q A + + K +
Sbjct: 260 SENMSIQLDSTFKQMKDEDLQSAIVQPSQMQTKLLQDQAASLQVFPSHSALKLED----- 314
Query: 63 AIPPSQLDSQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQEI 122
I P L SQ G S+ M K S+ +SN + +DL +GI S S Q++
Sbjct: 315 -ISPEDLPSQALPVEGLSEQTMPSKSTSSHV---KQSSNLTANDLPPQGILSQDTSSQDM 370
>gi|33469919 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 29.3 bits (64), Expect = 1.9
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 113 ASSPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAA 170
A+S K ++E+ +K ++ + + KY+++FE + G Q A+ K FE ++ A
Sbjct: 792 ATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRG-QSDIAITKDMFEEALRALA 848
>gi|33469917 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 29.3 bits (64), Expect = 1.9
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 113 ASSPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAA 170
A+S K ++E+ +K ++ + + KY+++FE + G Q A+ K FE ++ A
Sbjct: 792 ATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRG-QSDIAITKDMFEEALRALA 848
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 28.9 bits (63), Expect = 2.5
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 3 DKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGH 62
D + P+TVF P CD R + G S G+ + +K T
Sbjct: 396 DGENNMRQSPQTVFSLPANCDWKPRWLRATWGSSTEHENRG-SPPKGNLKGQFRK-GTVR 453
Query: 63 AIPPSQLDSQIDDF--TGFSKDGMMQKPG 89
+PPSQ DSQ D T S G+ +PG
Sbjct: 454 TLPPSQGDSQSLDIPNTADSLGGLSFEPG 482
>gi|45580688 complement component 7 precursor [Homo sapiens]
Length = 843
Score = 28.5 bits (62), Expect = 3.3
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 18 RPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKE--------KKLMTGHAIPPSQL 69
R REC++P G G S + + S + +L+ H P S +
Sbjct: 519 RSRECNNPP------------PSGGGRSCVGETTESTQCEDEELEHLRLLEPHCFPLSLV 566
Query: 70 DSQIDDFTGFSKDGMMQKPGSNAPVGGNV 98
++ KDG +Q G+ PVG NV
Sbjct: 567 PTEFCPSPPALKDGFVQDEGTMFPVGKNV 595
>gi|80861486 granule cell antiserum positive 14 [Homo sapiens]
Length = 834
Score = 28.1 bits (61), Expect = 4.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 71 SQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQEINAD 125
SQ++ F G G MQ+P +N+ T + SG+ L A SP S + IN +
Sbjct: 171 SQLNGFYGNRSAGSMQRPRANS----CATRSSSGESL-----AQSPDSSKSINCE 216
>gi|126723564 pecanex-like 1 [Homo sapiens]
Length = 2341
Score = 27.7 bits (60), Expect = 5.6
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 23 DSPSYQKRQRMALLARKQ------GAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDF 76
D P YQ+R+ + ++ + G+ +SL+ S +S E +L I SQ ++
Sbjct: 300 DFPLYQQRRGLDPVSELESSKPLSGSKESLVENSGLSGEFQLAGDLKINTSQPPTKSGKS 359
Query: 77 TGFSKDGMMQKPGS-NAPVGGNVTSNFSGDDLECRGIASSPKSQQEINADIK 127
+ M S + G+ S SG D + SS KS+Q + I+
Sbjct: 360 KPLKAEKSMDSLRSLSTRSSGSTESYCSGTDRDTNSTVSSYKSEQTSSTHIE 411
>gi|118150678 epithelial cell transforming sequence 2 oncogene-like
[Homo sapiens]
Length = 904
Score = 27.7 bits (60), Expect = 5.6
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 100 SNFSGDDLECRGIASSPKSQQEINADIKCQVVKEIRCLGRKYEKIFEMLEGV 151
S S +DL + + + Q+ +A+ + +VV+E+ RKY +I E++ V
Sbjct: 540 SRLSKNDLNFEALINLERILQKDSAEKRARVVRELLQSERKYVQILEIVRDV 591
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 27.7 bits (60), Expect = 5.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 25 PSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIP 65
PS + +AL + K G+ + AGS S + L GH P
Sbjct: 267 PSMANEKHLALSSSKSMPGERIKAGSGNSSQPSLREGHDKP 307
>gi|222136619 myxovirus resistance protein 1 [Homo sapiens]
Length = 662
Score = 26.9 bits (58), Expect = 9.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 135 RCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQFL 181
+ L RK +K G + P V R FE+I+K+ + +E V L
Sbjct: 427 KILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDML 473
>gi|222136617 myxovirus resistance protein 1 [Homo sapiens]
Length = 662
Score = 26.9 bits (58), Expect = 9.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 135 RCLGRKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARWVEIGTVQFL 181
+ L RK +K G + P V R FE+I+K+ + +E V L
Sbjct: 427 KILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDML 473
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 26.9 bits (58), Expect = 9.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 119 QQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKR----FFESIIKEAARW 172
+++ AD+ V K + L R+YEK+ E+LEG + V KR + + KE R+
Sbjct: 2818 KEQALADLN-SVEKSLADLFRRYEKMKEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRY 2874
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 26.9 bits (58), Expect = 9.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 119 QQEINADIKCQVVKEIRCLGRKYEKIFEMLEGVQGPTAVRKR----FFESIIKEAARW 172
+++ AD+ V K + L R+YEK+ E+LEG + V KR + + KE R+
Sbjct: 964 KEQALADLN-SVEKSLADLFRRYEKMKEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRY 1020
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,999,208
Number of Sequences: 37866
Number of extensions: 290602
Number of successful extensions: 783
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 753
Number of HSP's gapped (non-prelim): 35
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.