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Search of human proteins with 169215573
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169215981 PREDICTED: hypothetical protein [Homo sapiens] 632 0.0
gi|169215786 PREDICTED: hypothetical protein [Homo sapiens] 632 0.0
gi|169215573 PREDICTED: hypothetical protein [Homo sapiens] 632 0.0
gi|239753715 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|239748261 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|239742162 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 32 0.52
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 32 0.52
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 32 0.52
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 32 0.68
gi|33589848 transferrin receptor 2 [Homo sapiens] 32 0.68
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 32 0.68
gi|83776598 virus-induced signaling adapter [Homo sapiens] 32 0.89
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 32 0.89
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 31 1.5
gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 31 1.5
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 31 1.5
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens] 30 2.0
gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 30 2.0
gi|239753475 PREDICTED: hypothetical protein [Homo sapiens] 30 2.6
gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo ... 30 2.6
gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo ... 30 2.6
gi|145309328 papilin [Homo sapiens] 30 2.6
gi|24432056 hypothetical protein LOC144717 [Homo sapiens] 30 2.6
gi|56237029 integrin alpha 5 precursor [Homo sapiens] 30 3.4
gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 30 3.4
gi|29294639 mesoderm specific transcript isoform a [Homo sapiens] 30 3.4
gi|29294637 mesoderm specific transcript isoform b [Homo sapiens] 30 3.4
>gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 632 bits (1630), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
Query: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
>gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 632 bits (1630), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
Query: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
>gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 632 bits (1630), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1 MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
Query: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61 SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
>gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
P GEG EE W RG GS + PG C WQ + P
Sbjct: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
G HGPR NR+ LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152
>gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
P GEG EE W RG GS + PG C WQ + P
Sbjct: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
G HGPR NR+ LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152
>gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 33.9 bits (76), Expect = 0.18
Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
P GEG EE W RG GS + PG C WQ + P
Sbjct: 30 PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73
Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
L PSPG+ +P PP + R R W G G + + ++R C
Sbjct: 74 TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133
Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
G HGPR NR+ LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.52
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
RG G W K G L ++ R P W QG P P+ L P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780
Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
PP PL P R CHR W G L +LR + QQ G + E +A+
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835
Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
GP+ + LG A +++ PG + R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.52
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
RG G W K G L ++ R P W QG P P+ L P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780
Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
PP PL P R CHR W G L +LR + QQ G + E +A+
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835
Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
GP+ + LG A +++ PG + R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.52
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
RG G W K G L ++ R P W QG P P+ L P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780
Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
PP PL P R CHR W G L +LR + QQ G + E +A+
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835
Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
GP+ + LG A +++ PG + R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 32.0 bits (71), Expect = 0.68
Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
RG G W K G L ++ R P W QG P P+ L P
Sbjct: 393 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 452
Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
PP PL P R CHR W G L +LR + QQ G + E +A+
Sbjct: 453 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 507
Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
GP+ + LG A +++ PG + R E R G
Sbjct: 508 TRGPKECRQVGEAVLGEGGAPMQSSPGPPNRCLQRLEMRCG 548
>gi|33589848 transferrin receptor 2 [Homo sapiens]
Length = 801
Score = 32.0 bits (71), Expect = 0.68
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 98 GAPAAN-TSLPTMLATGIPSIPSQALGTQCSP--AGKGEGPIVIPEEQGAWRGEGSWLKT 154
G P+ N T P + ++G+PSIP+Q + + K +GP+ E QG+ G L
Sbjct: 334 GFPSFNQTQFPPVASSGLPSIPAQPISADIASRLLRKLKGPVAPQEWQGSLLGSPYHL-G 392
Query: 155 PGP 157
PGP
Sbjct: 393 PGP 395
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 32.0 bits (71), Expect = 0.68
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 22/95 (23%)
Query: 13 CFLLCPPWSSCARMGVGVAVGTLCLQEAT--LDRRGHSLSLSLVPAQTLPSSQGCAGLFA 70
C L CPPW+ G G + C+Q T D+R S S AG
Sbjct: 637 CHLTCPPWA----FGPGCSEECQCVQPHTQSCDKRDGSCSCK-------------AGFRG 679
Query: 71 EQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTS 105
E+C Q + G+ G Q C C VG + S
Sbjct: 680 ERC---QAECELGYFGPGCWQACTCPVGVACDSVS 711
>gi|83776598 virus-induced signaling adapter [Homo sapiens]
Length = 540
Score = 31.6 bits (70), Expect = 0.89
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 79 GLQGGWEGLSDDQC--CVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEGPI 136
G G +G DQ +C GA A SLP+ + T + + + AL +PA P
Sbjct: 265 GAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTVPS 324
Query: 137 VIP---EEQGAWRGEGSWLKTPGPLPQQDNRRASV 168
+P + GA P LP R V
Sbjct: 325 KLPTSSKPPGAVPSNALTNPAPSKLPINSTRAGMV 359
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
[Homo sapiens]
Length = 456
Score = 31.6 bits (70), Expect = 0.89
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 167 SVTFSSFPCWGWQGSL-YPLILDPSPGMLVTSLPHPPSP 204
SVT+ + G GSL +PL L SPG P PP P
Sbjct: 44 SVTYLCYSLLGGSGSLQFPLALQESPGAAAEPPPSPPPP 82
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 30.8 bits (68), Expect = 1.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 186 ILDPSPGMLVTSLPHPPSPL 205
+L PSPG+L S P PPSPL
Sbjct: 941 LLSPSPGLLSQSPPAPPSPL 960
>gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 205
Score = 30.8 bits (68), Expect = 1.5
Identities = 29/102 (28%), Positives = 35/102 (34%), Gaps = 35/102 (34%)
Query: 134 GPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPLILD 188
GP+V P E G W + SW +KTP P G GS PL
Sbjct: 51 GPLVPPTEGGLWSDQVSWPLWEDVKTPEP-------------------GEPGS--PLPAS 89
Query: 189 PSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSL 230
P P + + P PP H P V S + P L
Sbjct: 90 PHPPLQPPAFPDPP---------IHSPDPAVSSAHSFPAPRL 122
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 1.5
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 107 PTMLATGIPSIPSQALGTQCSPA---GKGEGPIVIPEEQGAWRGE---------GSWLKT 154
PT ++G+P+ P QA G PA G G GP P G G+ G L T
Sbjct: 167 PTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLST 226
Query: 155 PGPLPQQDNR 164
PG P+ +R
Sbjct: 227 PGGHPKPPHR 236
>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 30.4 bits (67), Expect = 2.0
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)
Query: 77 QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
+VG QG E +CC+ +P A + T + G +P + Q G G G
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166
Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
P + A EG W G + NRR S C+ G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226
Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
PG L V+ PH C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261
>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 30.4 bits (67), Expect = 2.0
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)
Query: 77 QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
+VG QG E +CC+ +P A + T + G +P + Q G G G
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166
Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
P + A EG W G + NRR S C+ G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226
Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
PG L V+ PH C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261
>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 30.4 bits (67), Expect = 2.0
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)
Query: 77 QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
+VG QG E +CC+ +P A + T + G +P + Q G G G
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166
Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
P + A EG W G + NRR S C+ G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226
Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
PG L V+ PH C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261
>gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 205
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 26/90 (28%)
Query: 118 PSQALGTQCSPAGKGEGPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSS 172
PS++ + + GP+V P E G W + SW +KTP P
Sbjct: 35 PSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP--------------- 79
Query: 173 FPCWGWQGSLYPLILDPSPGMLVTSLPHPP 202
G GS PL P P + + P PP
Sbjct: 80 ----GEPGS--PLPASPHPPLQPPAFPDPP 103
>gi|239753475 PREDICTED: hypothetical protein [Homo sapiens]
Length = 721
Score = 30.0 bits (66), Expect = 2.6
Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)
Query: 14 FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
FLLC P ++C + G L +Q A H ++SLS +P Q
Sbjct: 52 FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111
Query: 61 ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
SS A C+ GLQG G + G+P+A+ + P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162
Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
P+ L T P +G EG +P +G+W+ G K P +
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222
Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
+S I P+ VT HPPS C + R W V +
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268
Query: 223 R 223
R
Sbjct: 269 R 269
>gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo
sapiens]
Length = 721
Score = 30.0 bits (66), Expect = 2.6
Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)
Query: 14 FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
FLLC P ++C + G L +Q A H ++SLS +P Q
Sbjct: 52 FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111
Query: 61 ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
SS A C+ GLQG G + G+P+A+ + P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162
Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
P+ L T P +G EG +P +G+W+ G K P +
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222
Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
+S I P+ VT HPPS C + R W V +
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268
Query: 223 R 223
R
Sbjct: 269 R 269
>gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo
sapiens]
Length = 721
Score = 30.0 bits (66), Expect = 2.6
Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)
Query: 14 FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
FLLC P ++C + G L +Q A H ++SLS +P Q
Sbjct: 52 FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111
Query: 61 ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
SS A C+ GLQG G + G+P+A+ + P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162
Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
P+ L T P +G EG +P +G+W+ G K P +
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222
Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
+S I P+ VT HPPS C + R W V +
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268
Query: 223 R 223
R
Sbjct: 269 R 269
>gi|145309328 papilin [Homo sapiens]
Length = 1251
Score = 30.0 bits (66), Expect = 2.6
Identities = 51/199 (25%), Positives = 67/199 (33%), Gaps = 52/199 (26%)
Query: 7 APSLTPCFLLCP-PWSSCA-RMGVGVAVGTL-CLQEATLDRRGHSLSLSLVPAQTLPSSQ 63
A +L C P PW C+ GVGV ++ C E + SL P T P
Sbjct: 391 ACNLQRCAAWSPEPWGECSVSCGVGVRKRSVTCRGERGSLLHTAACSLEDRPPLTEPCVH 450
Query: 64 GCAGLFAEQCWVRQVGLQGGWEGLSDDQCC--------VCVVGAPAANTSL--------- 106
L ++Q W G W GL C +C +G P+ SL
Sbjct: 451 EDCPLLSDQAWH-----VGTW-GLCSKSCSSGTRRRQVICAIGPPSHCGSLQHSKPVDVE 504
Query: 107 -----PTMLATGIPSI---------PSQALGTQCSPAGKGEGPIVIPEEQGAWRG----- 147
P L +PS+ P LG Q SPA G +E + RG
Sbjct: 505 PCNTQPCHLPQEVPSMQDVHTPASNPWMPLGPQESPASDSRGQWWAAQEHPSARGDHRGE 564
Query: 148 -------EGSWLKTPGPLP 159
+G+ L GP P
Sbjct: 565 RGDPRGDQGTHLSALGPAP 583
>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
Length = 249
Score = 30.0 bits (66), Expect = 2.6
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 105 SLPTMLATGIPSIPSQALGTQCSPAGKGEGPIVIPEEQGA--WRGEGSWLKTPGPLPQQD 162
SLP+ LA +PS+PS P + + P+E G W E ++ P P P
Sbjct: 151 SLPSALAP-VPSLPSAPAPVPALPLPRRPSALP-PKENGCAVWSTEATFRPGPEPPPPPP 208
Query: 163 NRRAS 167
RRAS
Sbjct: 209 RRRAS 213
>gi|56237029 integrin alpha 5 precursor [Homo sapiens]
Length = 1049
Score = 29.6 bits (65), Expect = 3.4
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 96 VVGAPAANTSLPTMLATG-IPSIPSQALGTQCSP 128
+VGAP ANTS P +L G + P A TQC+P
Sbjct: 77 LVGAPKANTSQPGVLQGGAVYLCPWGASPTQCTP 110
>gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 347
Score = 29.6 bits (65), Expect = 3.4
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 26/74 (35%)
Query: 134 GPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPLILD 188
GP+V P E G W + SW +KTP P G GS PL
Sbjct: 193 GPLVPPTEGGLWSDQVSWPLWEDVKTPEP-------------------GEPGS--PLPAS 231
Query: 189 PSPGMLVTSLPHPP 202
P P + + P PP
Sbjct: 232 PHPPLQPPAFPDPP 245
>gi|29294639 mesoderm specific transcript isoform a [Homo sapiens]
Length = 335
Score = 29.6 bits (65), Expect = 3.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 193 MLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS 252
+L L PP L P + W+ SG+ + LR+F GV G EI
Sbjct: 24 LLAAYLHIPPPQLSPALH----SWKS--SGKFFTYKGLRIFYQDSVGVVG---SPEIVVL 74
Query: 253 FHG-PRRPFRSNRVFLGLSLAFVKA------GPGFTQKMGP 286
HG P + +++ GL+L F + G GF+ K P
Sbjct: 75 LHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRP 115
>gi|29294637 mesoderm specific transcript isoform b [Homo sapiens]
Length = 326
Score = 29.6 bits (65), Expect = 3.4
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 193 MLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS 252
+L L PP L P + W+ SG+ + LR+F GV G EI
Sbjct: 15 LLAAYLHIPPPQLSPALH----SWKS--SGKFFTYKGLRIFYQDSVGVVG---SPEIVVL 65
Query: 253 FHG-PRRPFRSNRVFLGLSLAFVKA------GPGFTQKMGP 286
HG P + +++ GL+L F + G GF+ K P
Sbjct: 66 LHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRP 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,503,392
Number of Sequences: 37866
Number of extensions: 795723
Number of successful extensions: 2208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2187
Number of HSP's gapped (non-prelim): 63
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.