Guide to the Human Genome
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Search of human proteins with 169215573

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
         (299 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]           632   0.0  
gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]           632   0.0  
gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]           632   0.0  
gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]            34   0.18 
gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]            34   0.18 
gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]            34   0.18 
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]            32   0.52 
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ...    32   0.52 
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]            32   0.52 
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]            32   0.68 
gi|33589848 transferrin receptor 2 [Homo sapiens]                      32   0.68 
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]                32   0.68 
gi|83776598 virus-induced signaling adapter [Homo sapiens]             32   0.89 
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase...    32   0.89 
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]       31   1.5  
gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]     31   1.5  
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    31   1.5  
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]            30   2.0  
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]            30   2.0  
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]            30   2.0  
gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens]     30   2.0  
gi|239753475 PREDICTED: hypothetical protein [Homo sapiens]            30   2.6  
gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo ...    30   2.6  
gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo ...    30   2.6  
gi|145309328 papilin [Homo sapiens]                                    30   2.6  
gi|24432056 hypothetical protein LOC144717 [Homo sapiens]              30   2.6  
gi|56237029 integrin alpha 5 precursor [Homo sapiens]                  30   3.4  
gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]     30   3.4  
gi|29294639 mesoderm specific transcript isoform a [Homo sapiens]      30   3.4  
gi|29294637 mesoderm specific transcript isoform b [Homo sapiens]      30   3.4  

>gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score =  632 bits (1630), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
           MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60

Query: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
           SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120

Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
           ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180

Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
           SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240

Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
           CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299


>gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score =  632 bits (1630), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
           MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60

Query: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
           SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120

Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
           ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180

Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
           SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240

Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
           CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299


>gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 299

 Score =  632 bits (1630), Expect = 0.0
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60
           MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP
Sbjct: 1   MWGPTAAPSLTPCFLLCPPWSSCARMGVGVAVGTLCLQEATLDRRGHSLSLSLVPAQTLP 60

Query: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120
           SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ
Sbjct: 61  SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQ 120

Query: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180
           ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG
Sbjct: 121 ALGTQCSPAGKGEGPIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQG 180

Query: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240
           SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV
Sbjct: 181 SLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGV 240

Query: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299
           CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT
Sbjct: 241 CGLSVMVEIQASFHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKGIPVSQT 299


>gi|239753715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73

Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133

Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
           G           HGPR     NR+   LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152


>gi|239748261 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73

Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133

Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
           G           HGPR     NR+   LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152


>gi|239742162 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 42/150 (28%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 128 PAGKGEGPIVIPEEQGAW--RGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPL 185
           P   GEG     EE   W  RG GS  + PG                  C  WQ +  P 
Sbjct: 30  PFSFGEGL----EEGRGWGGRGSGSASQRPGAADLSG------------CSAWQLASVPA 73

Query: 186 ILDPSPGMLVTSLPHPP---SPLCPEVRVCHRPW-QGVVSGRLYDLPSLRVFILQQRGVC 241
            L PSPG+    +P PP     +    R   R W  G   G         + + ++R  C
Sbjct: 74  TLLPSPGLESGDIPSPPLGVPGVGARARERRRLWLDGGEEGSESSPGQAELSMWRRRREC 133

Query: 242 GLSVMVEIQASFHGPRRPFRSNRVFLGLSL 271
           G           HGPR     NR+   LSL
Sbjct: 134 G-----------HGPREGGHPNRIGAFLSL 152


>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
           RG G W K   G L ++   R        P      W  QG   P    P+   L    P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780

Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
            PP PL P  R   CHR W G        L +LR  + QQ    G   + E +A+     
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835

Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
             GP+   +     LG   A +++ PG   +   R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876


>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
           sapiens]
          Length = 884

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
           RG G W K   G L ++   R        P      W  QG   P    P+   L    P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780

Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
            PP PL P  R   CHR W G        L +LR  + QQ    G   + E +A+     
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835

Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
             GP+   +     LG   A +++ PG   +   R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876


>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
           RG G W K   G L ++   R        P      W  QG   P    P+   L    P
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 780

Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
            PP PL P  R   CHR W G        L +LR  + QQ    G   + E +A+     
Sbjct: 781 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 835

Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
             GP+   +     LG   A +++ PG   +   R E R G
Sbjct: 836 TRGPKECRQVGEAVLGEGEAPMQSSPGPPNRCLQRLEMRCG 876


>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 556

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 46/161 (28%), Positives = 60/161 (37%), Gaps = 18/161 (11%)

Query: 146 RGEGSWLK-TPGPLPQQDNRRASVTFSSFP-----CWGWQGSLYPLILDPSPGMLVTSLP 199
           RG G W K   G L ++   R        P      W  QG   P    P+   L    P
Sbjct: 393 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP 452

Query: 200 HPPSPLCPEVR--VCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS----- 252
            PP PL P  R   CHR W G        L +LR  + QQ    G   + E +A+     
Sbjct: 453 PPPPPLPPPPRREPCHRAWPGPAQ----PLGNLRPPV-QQSAPGGRKCVKEGEATGPSKE 507

Query: 253 FHGPRRPFRSNRVFLGLSLAFVKAGPGFTQKMGPREEERKG 293
             GP+   +     LG   A +++ PG   +   R E R G
Sbjct: 508 TRGPKECRQVGEAVLGEGGAPMQSSPGPPNRCLQRLEMRCG 548


>gi|33589848 transferrin receptor 2 [Homo sapiens]
          Length = 801

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 98  GAPAAN-TSLPTMLATGIPSIPSQALGTQCSP--AGKGEGPIVIPEEQGAWRGEGSWLKT 154
           G P+ N T  P + ++G+PSIP+Q +    +     K +GP+   E QG+  G    L  
Sbjct: 334 GFPSFNQTQFPPVASSGLPSIPAQPISADIASRLLRKLKGPVAPQEWQGSLLGSPYHL-G 392

Query: 155 PGP 157
           PGP
Sbjct: 393 PGP 395


>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
          Length = 1541

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 22/95 (23%)

Query: 13  CFLLCPPWSSCARMGVGVAVGTLCLQEAT--LDRRGHSLSLSLVPAQTLPSSQGCAGLFA 70
           C L CPPW+     G G +    C+Q  T   D+R  S S               AG   
Sbjct: 637 CHLTCPPWA----FGPGCSEECQCVQPHTQSCDKRDGSCSCK-------------AGFRG 679

Query: 71  EQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTS 105
           E+C   Q   + G+ G    Q C C VG    + S
Sbjct: 680 ERC---QAECELGYFGPGCWQACTCPVGVACDSVS 711


>gi|83776598 virus-induced signaling adapter [Homo sapiens]
          Length = 540

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 79  GLQGGWEGLSDDQC--CVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEGPI 136
           G   G +G   DQ    +C  GA A   SLP+ + T +  + + AL    +PA     P 
Sbjct: 265 GAAEGKQGAESDQAEPIICSSGAEAPANSLPSKVPTTLMPVNTVALKVPANPASVSTVPS 324

Query: 137 VIP---EEQGAWRGEGSWLKTPGPLPQQDNRRASV 168
            +P   +  GA          P  LP    R   V
Sbjct: 325 KLPTSSKPPGAVPSNALTNPAPSKLPINSTRAGMV 359


>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
           [Homo sapiens]
          Length = 456

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 167 SVTFSSFPCWGWQGSL-YPLILDPSPGMLVTSLPHPPSP 204
           SVT+  +   G  GSL +PL L  SPG      P PP P
Sbjct: 44  SVTYLCYSLLGGSGSLQFPLALQESPGAAAEPPPSPPPP 82


>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
          Length = 1243

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 186 ILDPSPGMLVTSLPHPPSPL 205
           +L PSPG+L  S P PPSPL
Sbjct: 941 LLSPSPGLLSQSPPAPPSPL 960


>gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
          Length = 205

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 29/102 (28%), Positives = 35/102 (34%), Gaps = 35/102 (34%)

Query: 134 GPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPLILD 188
           GP+V P E G W  + SW     +KTP P                   G  GS  PL   
Sbjct: 51  GPLVPPTEGGLWSDQVSWPLWEDVKTPEP-------------------GEPGS--PLPAS 89

Query: 189 PSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSL 230
           P P +   + P PP          H P   V S   +  P L
Sbjct: 90  PHPPLQPPAFPDPP---------IHSPDPAVSSAHSFPAPRL 122


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%)

Query: 107 PTMLATGIPSIPSQALGTQCSPA---GKGEGPIVIPEEQGAWRGE---------GSWLKT 154
           PT  ++G+P+ P QA G    PA   G G GP   P   G   G+         G  L T
Sbjct: 167 PTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLST 226

Query: 155 PGPLPQQDNR 164
           PG  P+  +R
Sbjct: 227 PGGHPKPPHR 236


>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 77  QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
           +VG QG  E     +CC+    +P A +   T +  G   +P +    Q    G G G  
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166

Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
                        P      + A   EG W    G    + NRR      S  C+   G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226

Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
                    PG L     V+  PH     C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261


>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 77  QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
           +VG QG  E     +CC+    +P A +   T +  G   +P +    Q    G G G  
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166

Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
                        P      + A   EG W    G    + NRR      S  C+   G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226

Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
                    PG L     V+  PH     C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261


>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 77  QVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSIPSQALGTQCSPAGKGEG-- 134
           +VG QG  E     +CC+    +P A +   T +  G   +P +    Q    G G G  
Sbjct: 107 RVGRQGHGERSRRCRCCLGDAASPWAQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWG 166

Query: 135 -------------PIVIPEEQGAWRGEGSWLKTPGPLPQQDNRRASVTFSSFPCWGWQGS 181
                        P      + A   EG W    G    + NRR      S  C+   G+
Sbjct: 167 DATLSRRNCTPTPPYAGGSREPARGKEGVWTPEGGDGDPEGNRRLRPPPLSRRCFRSGGA 226

Query: 182 LYPLILDPSPGML-----VTSLPHPPSPLCPEVRVC 212
                    PG L     V+  PH     C EVRVC
Sbjct: 227 AVFTTTARLPGFLPDCWGVSLAPHHVR-WCAEVRVC 261


>gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
          Length = 205

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 26/90 (28%)

Query: 118 PSQALGTQCSPAGKGEGPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSS 172
           PS++     +   +  GP+V P E G W  + SW     +KTP P               
Sbjct: 35  PSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP--------------- 79

Query: 173 FPCWGWQGSLYPLILDPSPGMLVTSLPHPP 202
               G  GS  PL   P P +   + P PP
Sbjct: 80  ----GEPGS--PLPASPHPPLQPPAFPDPP 103


>gi|239753475 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 721

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)

Query: 14  FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
           FLLC       P ++C  +      G L +Q A      H    ++SLS +P Q      
Sbjct: 52  FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111

Query: 61  ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
              SS   A      C+    GLQG   G +         G+P+A+  +        P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162

Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
           P+  L      T   P  +G       EG   +P  +G+W+   G     K     P + 
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222

Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
                   +S             I  P+    VT   HPPS  C  +    R W  V + 
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268

Query: 223 R 223
           R
Sbjct: 269 R 269


>gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo
           sapiens]
          Length = 721

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)

Query: 14  FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
           FLLC       P ++C  +      G L +Q A      H    ++SLS +P Q      
Sbjct: 52  FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111

Query: 61  ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
              SS   A      C+    GLQG   G +         G+P+A+  +        P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162

Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
           P+  L      T   P  +G       EG   +P  +G+W+   G     K     P + 
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222

Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
                   +S             I  P+    VT   HPPS  C  +    R W  V + 
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268

Query: 223 R 223
           R
Sbjct: 269 R 269


>gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo
           sapiens]
          Length = 721

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 54/241 (22%)

Query: 14  FLLCP------PWSSCARMGVGVAVGTLCLQEATLDRRGH----SLSLSLVPAQTLP--- 60
           FLLC       P ++C  +      G L +Q A      H    ++SLS +P Q      
Sbjct: 52  FLLCENLQREEPTAACVHLCAQAPDGLLGVQSAVAALTSHRTTCTISLSEMPGQDSSARL 111

Query: 61  ---SSQGCAGLFAEQCWVRQVGLQGGWEGLSDDQCCVCVVGAPAANTSLPTMLATGIPSI 117
              SS   A      C+    GLQG   G +         G+P+A+  +        P++
Sbjct: 112 KAFSSSSSAPTLPPLCFDAG-GLQGSRLGATP--------GSPSASREVRWPKEASAPAL 162

Query: 118 PSQAL-----GTQCSPAGKG-------EGPIVIPEEQGAWR---GEGSWLKTPGPLPQQD 162
           P+  L      T   P  +G       EG   +P  +G+W+   G     K     P + 
Sbjct: 163 PTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPPKH 222

Query: 163 NRRASVTFSSFPCWGWQGSLYPLILDPSPGMLVTSLPHPPSPLCPEVRVCHRPWQGVVSG 222
                   +S             I  P+    VT   HPPS  C  +    R W  V + 
Sbjct: 223 TAPPGPDLTS-------------IRTPASEPPVTGC-HPPSGGCGWISRLPRTWTRVAAS 268

Query: 223 R 223
           R
Sbjct: 269 R 269


>gi|145309328 papilin [Homo sapiens]
          Length = 1251

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 51/199 (25%), Positives = 67/199 (33%), Gaps = 52/199 (26%)

Query: 7   APSLTPCFLLCP-PWSSCA-RMGVGVAVGTL-CLQEATLDRRGHSLSLSLVPAQTLPSSQ 63
           A +L  C    P PW  C+   GVGV   ++ C  E        + SL   P  T P   
Sbjct: 391 ACNLQRCAAWSPEPWGECSVSCGVGVRKRSVTCRGERGSLLHTAACSLEDRPPLTEPCVH 450

Query: 64  GCAGLFAEQCWVRQVGLQGGWEGLSDDQCC--------VCVVGAPAANTSL--------- 106
               L ++Q W       G W GL    C         +C +G P+   SL         
Sbjct: 451 EDCPLLSDQAWH-----VGTW-GLCSKSCSSGTRRRQVICAIGPPSHCGSLQHSKPVDVE 504

Query: 107 -----PTMLATGIPSI---------PSQALGTQCSPAGKGEGPIVIPEEQGAWRG----- 147
                P  L   +PS+         P   LG Q SPA    G     +E  + RG     
Sbjct: 505 PCNTQPCHLPQEVPSMQDVHTPASNPWMPLGPQESPASDSRGQWWAAQEHPSARGDHRGE 564

Query: 148 -------EGSWLKTPGPLP 159
                  +G+ L   GP P
Sbjct: 565 RGDPRGDQGTHLSALGPAP 583


>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
          Length = 249

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 105 SLPTMLATGIPSIPSQALGTQCSPAGKGEGPIVIPEEQGA--WRGEGSWLKTPGPLPQQD 162
           SLP+ LA  +PS+PS        P  +    +  P+E G   W  E ++   P P P   
Sbjct: 151 SLPSALAP-VPSLPSAPAPVPALPLPRRPSALP-PKENGCAVWSTEATFRPGPEPPPPPP 208

Query: 163 NRRAS 167
            RRAS
Sbjct: 209 RRRAS 213


>gi|56237029 integrin alpha 5 precursor [Homo sapiens]
          Length = 1049

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 96  VVGAPAANTSLPTMLATG-IPSIPSQALGTQCSP 128
           +VGAP ANTS P +L  G +   P  A  TQC+P
Sbjct: 77  LVGAPKANTSQPGVLQGGAVYLCPWGASPTQCTP 110


>gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
          Length = 347

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 26/74 (35%)

Query: 134 GPIVIPEEQGAWRGEGSW-----LKTPGPLPQQDNRRASVTFSSFPCWGWQGSLYPLILD 188
           GP+V P E G W  + SW     +KTP P                   G  GS  PL   
Sbjct: 193 GPLVPPTEGGLWSDQVSWPLWEDVKTPEP-------------------GEPGS--PLPAS 231

Query: 189 PSPGMLVTSLPHPP 202
           P P +   + P PP
Sbjct: 232 PHPPLQPPAFPDPP 245


>gi|29294639 mesoderm specific transcript isoform a [Homo sapiens]
          Length = 335

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 16/101 (15%)

Query: 193 MLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS 252
           +L   L  PP  L P +      W+   SG+ +    LR+F     GV G     EI   
Sbjct: 24  LLAAYLHIPPPQLSPALH----SWKS--SGKFFTYKGLRIFYQDSVGVVG---SPEIVVL 74

Query: 253 FHG-PRRPFRSNRVFLGLSLAFVKA------GPGFTQKMGP 286
            HG P   +   +++ GL+L F +       G GF+ K  P
Sbjct: 75  LHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRP 115


>gi|29294637 mesoderm specific transcript isoform b [Homo sapiens]
          Length = 326

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 16/101 (15%)

Query: 193 MLVTSLPHPPSPLCPEVRVCHRPWQGVVSGRLYDLPSLRVFILQQRGVCGLSVMVEIQAS 252
           +L   L  PP  L P +      W+   SG+ +    LR+F     GV G     EI   
Sbjct: 15  LLAAYLHIPPPQLSPALH----SWKS--SGKFFTYKGLRIFYQDSVGVVG---SPEIVVL 65

Query: 253 FHG-PRRPFRSNRVFLGLSLAFVKA------GPGFTQKMGP 286
            HG P   +   +++ GL+L F +       G GF+ K  P
Sbjct: 66  LHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRP 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,503,392
Number of Sequences: 37866
Number of extensions: 795723
Number of successful extensions: 2208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2187
Number of HSP's gapped (non-prelim): 63
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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