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Search of human proteins with 169210434
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
(301 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 622 e-179
gi|239756547 PREDICTED: hypothetical protein [Homo sapiens] 371 e-103
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 54 2e-07
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 46 4e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 44 2e-04
gi|150170699 kinesin family member 26A [Homo sapiens] 43 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 4e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 5e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 5e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 5e-04
gi|239754584 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239754578 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239749143 PREDICTED: hypothetical protein XP_002346923 [Homo ... 42 7e-04
gi|239744970 PREDICTED: hypothetical protein XP_002343319 [Homo ... 42 7e-04
gi|239743187 PREDICTED: hypothetical protein XP_002342771 [Homo ... 42 7e-04
gi|239743182 PREDICTED: hypothetical protein XP_002342770 [Homo ... 42 7e-04
gi|239508856 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239508847 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 41 0.001
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 41 0.001
gi|110832843 TBP-associated factor 4 [Homo sapiens] 41 0.001
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens] 40 0.003
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 622 bits (1605), Expect = e-179
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARR 60
MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARR
Sbjct: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARR 60
Query: 61 AGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG 120
AGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG
Sbjct: 61 AGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG 120
Query: 121 PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG 180
PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG
Sbjct: 121 PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG 180
Query: 181 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 240
VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT
Sbjct: 181 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 240
Query: 241 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 300
DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT
Sbjct: 241 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 300
Query: 301 Q 301
Q
Sbjct: 301 Q 301
>gi|239756547 PREDICTED: hypothetical protein [Homo sapiens]
Length = 240
Score = 371 bits (952), Expect = e-103
Identities = 204/301 (67%), Positives = 208/301 (69%), Gaps = 61/301 (20%)
Query: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARR 60
MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRS
Sbjct: 1 MTGLLSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRS---------- 50
Query: 61 AGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG 120
G PA GA K RA +G RG
Sbjct: 51 ---------------------GPPAS---------GAPKTPTPPNVRAGRG-------RG 73
Query: 121 PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG 180
P G + R+ A+RT G P E R G SQPSWEGELWG
Sbjct: 74 PRVRG-------WRRSEPAARTAQGLPPEPEPTHTRVAG-------LGSSQPSWEGELWG 119
Query: 181 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 240
VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT
Sbjct: 120 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPPCLHCLFAQHT 179
Query: 241 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 300
DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT
Sbjct: 180 DADGGWEKGQTLLPANRRCRSRGLTKMAAAVSAATTTTTTTTRSESLSPARPVFSRETIT 239
Query: 301 Q 301
Q
Sbjct: 240 Q 240
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 53.9 bits (128), Expect = 2e-07
Identities = 59/194 (30%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 40 RGPPGRPSLRSDSHPTQRARRAGEGPARARLEAER---------AGCAHGPGAPARTRAH 90
RG G+ SHPT +R AR L + R A HGP + R
Sbjct: 121 RGKTGQWKEGRGSHPTPEPQRLA---ARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPS 177
Query: 91 AHK-GRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
AH GRG+G++ R + ++ + + AP G S+ + A R P A E
Sbjct: 178 AHPPGRGSGRV---PRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREE 234
Query: 150 GARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG- 208
A + GG E A R + QP L L S A+S A +PPPL PR G
Sbjct: 235 AAAGSRGRGGAERPAARGSAQQPPLARLL-----LASAVSLAASLARSPPPLQPRLGSAS 289
Query: 209 -PLLATAFAAFKLP 221
P LA A + P
Sbjct: 290 PPRLAAPLAGSRAP 303
Score = 38.9 bits (89), Expect = 0.006
Identities = 58/177 (32%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 37 SRARGPPG-RPSLRSDSHPTQRARRAGEG-------PARARLEAERAGCAHGPGAPARTR 88
S AR PP +P L S S P A AG P R R AER+ HG P
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLP---- 328
Query: 89 AHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPA 148
+ G V+ AR R +GG+ E RG C G P + GP AP
Sbjct: 329 ----RSLSRGGEVVGARRR--RGGE-ERRVRGRRQG------CALGSPPIPA--GPAAPG 373
Query: 149 E-GARAAPRE----GGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPP 200
G R A R+ GGG V+ R +GE GVR V+ SS P P
Sbjct: 374 RAGERRAARQWRKRGGGPGVSPR-----EGAQGE--GVRGGVTPRARGSSTCLRPSP 423
Score = 32.7 bits (73), Expect = 0.40
Identities = 47/187 (25%), Positives = 59/187 (31%), Gaps = 50/187 (26%)
Query: 31 GHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPA------------------------ 66
G PP A G + P + RRA PA
Sbjct: 286 GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRG 345
Query: 67 --RARLEAERAGCA-------HGPGAPART----RAHAHKGRGAGKLVIQARTRAQKGGK 113
R+ R GCA GP AP R A + RG G V ++G +
Sbjct: 346 GEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV-----SPREGAQ 400
Query: 114 GEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAP-----AEGARAAPREGGGEAVAERCA 168
GE R G P S CL P+ + GAP A G R + E V
Sbjct: 401 GEGVRGGVTPRARGSSTCL---RPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHT 457
Query: 169 RSQPSWE 175
S P++E
Sbjct: 458 ASNPTYE 464
Score = 31.2 bits (69), Expect = 1.2
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 11/143 (7%)
Query: 43 PGRPSLRSDSHPTQRARRAGEGPA-----RARLEAERAGC---AHGPGAPARTRAHAHKG 94
P P + ++ R+ G GP A+ E R G A G R +G
Sbjct: 369 PAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQG 428
Query: 95 RGAGKLVIQARTR-AQKGGKGEETRRGPAPAGLT--PSVCLYGRAPTASRTGPGAPAEGA 151
+ + A R + + EE G + T P +AP+ R P +PA
Sbjct: 429 GAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATST 488
Query: 152 RAAPREGGGEAVAERCARSQPSW 174
RE G +V +RS +W
Sbjct: 489 HYLDRESGLGSVNSHPSRSPYNW 511
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 53.9 bits (128), Expect = 2e-07
Identities = 59/194 (30%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 40 RGPPGRPSLRSDSHPTQRARRAGEGPARARLEAER---------AGCAHGPGAPARTRAH 90
RG G+ SHPT +R AR L + R A HGP + R
Sbjct: 121 RGKTGQWKEGRGSHPTPEPQRLA---ARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPS 177
Query: 91 AHK-GRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
AH GRG+G++ R + ++ + + AP G S+ + A R P A E
Sbjct: 178 AHPPGRGSGRV---PRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREE 234
Query: 150 GARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEG- 208
A + GG E A R + QP L L S A+S A +PPPL PR G
Sbjct: 235 AAAGSRGRGGAERPAARGSAQQPPLARLL-----LASAVSLAASLARSPPPLQPRLGSAS 289
Query: 209 -PLLATAFAAFKLP 221
P LA A + P
Sbjct: 290 PPRLAAPLAGSRAP 303
Score = 38.9 bits (89), Expect = 0.006
Identities = 58/177 (32%), Positives = 69/177 (38%), Gaps = 39/177 (22%)
Query: 37 SRARGPPG-RPSLRSDSHPTQRARRAGEG-------PARARLEAERAGCAHGPGAPARTR 88
S AR PP +P L S S P A AG P R R AER+ HG P
Sbjct: 273 SLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLP---- 328
Query: 89 AHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPA 148
+ G V+ AR R +GG+ E RG C G P + GP AP
Sbjct: 329 ----RSLSRGGEVVGARRR--RGGE-ERRVRGRRQG------CALGSPPIPA--GPAAPG 373
Query: 149 E-GARAAPRE----GGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPP 200
G R A R+ GGG V+ R +GE GVR V+ SS P P
Sbjct: 374 RAGERRAARQWRKRGGGPGVSPR-----EGAQGE--GVRGGVTPRARGSSTCLRPSP 423
Score = 32.7 bits (73), Expect = 0.40
Identities = 47/187 (25%), Positives = 59/187 (31%), Gaps = 50/187 (26%)
Query: 31 GHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPA------------------------ 66
G PP A G + P + RRA PA
Sbjct: 286 GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRG 345
Query: 67 --RARLEAERAGCA-------HGPGAPART----RAHAHKGRGAGKLVIQARTRAQKGGK 113
R+ R GCA GP AP R A + RG G V ++G +
Sbjct: 346 GEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV-----SPREGAQ 400
Query: 114 GEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAP-----AEGARAAPREGGGEAVAERCA 168
GE R G P S CL P+ + GAP A G R + E V
Sbjct: 401 GEGVRGGVTPRARGSSTCL---RPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHT 457
Query: 169 RSQPSWE 175
S P++E
Sbjct: 458 ASNPTYE 464
Score = 31.2 bits (69), Expect = 1.2
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 11/143 (7%)
Query: 43 PGRPSLRSDSHPTQRARRAGEGPA-----RARLEAERAGC---AHGPGAPARTRAHAHKG 94
P P + ++ R+ G GP A+ E R G A G R +G
Sbjct: 369 PAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQG 428
Query: 95 RGAGKLVIQARTR-AQKGGKGEETRRGPAPAGLT--PSVCLYGRAPTASRTGPGAPAEGA 151
+ + A R + + EE G + T P +AP+ R P +PA
Sbjct: 429 GAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATST 488
Query: 152 RAAPREGGGEAVAERCARSQPSW 174
RE G +V +RS +W
Sbjct: 489 HYLDRESGLGSVNSHPSRSPYNW 511
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 47.8 bits (112), Expect = 1e-05
Identities = 74/271 (27%), Positives = 93/271 (34%), Gaps = 28/271 (10%)
Query: 5 LSPVLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEG 64
L P+ L +G + R C L S W PP RA + + + +RA G
Sbjct: 186 LCPLKLRKGSS---RRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPG 242
Query: 65 PARARLEAERAGC----AHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG 120
+ + AGC A G G R R A G + +RA+ G
Sbjct: 243 -STLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPG--------K 293
Query: 121 PAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWG 180
PAP G P L G + T G+ G A+A R P G L G
Sbjct: 294 PAPRGSAPPARLRGGGGGSGLTQLVGSGRGS-GVTHSVGTHALATRRGSRAPRPVGVLRG 352
Query: 181 VRHLVSLSLPASSGACAPPPLPPRRGEGPLLAT-------AFAAFKLPWRLRLLPPPCLH 233
V H LS PA +PP P R GP L A A LP L P P H
Sbjct: 353 VPHFRPLSSPAPQ---SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPA-H 408
Query: 234 CLFAQHTDADGGWEKGQTLLPANRRCRSRGL 264
Q + GG + A R R G+
Sbjct: 409 DWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 439
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/207 (30%), Positives = 78/207 (37%), Gaps = 28/207 (13%)
Query: 36 PSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGA------PART-R 88
P R+ PP R + S +Q + + P + + AG GPGA PART
Sbjct: 1858 PPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLL 1917
Query: 89 AHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAP-AGLTPSVCLYGRAPTASRTGPGAP 147
A HK + R+ + RRGP P A P GRA T GPG
Sbjct: 1918 AKQHKTQ---------RSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGT--EAGPG-- 1964
Query: 148 AEGAR------AAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPL 201
A G R A+ G E+ R Q ++ E G+R S A S A AP
Sbjct: 1965 ARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGA 2024
Query: 202 PPRRGEGPLLATAFAAFKLPWRLRLLP 228
PRRG P L F LR P
Sbjct: 2025 SPRRGR-PALPAVFLCSSRCEELRAAP 2050
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 44.7 bits (104), Expect = 1e-04
Identities = 42/139 (30%), Positives = 49/139 (35%), Gaps = 11/139 (7%)
Query: 31 GHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAH 90
G RDPP PP + HP A R G RAR + AG GP A R
Sbjct: 34 GLRDPPPPRPAPPRPGEEPGNRHPPPPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQR 93
Query: 91 AHKGRGAGKLVIQARTRAQKGGKGEETRRG---------PAPAGLTPSVCLYGRA--PTA 139
A +G A + Q + G G P P P + G A P
Sbjct: 94 ADEGAAAARPERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPAD 153
Query: 140 SRTGPGAPAEGARAAPREG 158
S APA +R APR G
Sbjct: 154 SAPPSPAPAPRSRPAPRPG 172
Score = 28.5 bits (62), Expect = 7.6
Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 22/110 (20%)
Query: 114 GEE--TRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQ 171
GEE R P PA T R P+ + G P AAP G + E A ++
Sbjct: 49 GEEPGNRHPPPPAARTHPGSCRARCPSPAAGGLRGP---WTAAP---GRQRADEGAAAAR 102
Query: 172 PSWEGELWGVRHLVSLSLPASSGACAP-------PPLPPRRGEGPLLATA 214
P + +W R LP S+ A AP PP PP E P L A
Sbjct: 103 PERQ-RVWARR------LPGSAAAPAPGRDALRLPPPPPPPPERPRLPPA 145
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 43.9 bits (102), Expect = 2e-04
Identities = 63/194 (32%), Positives = 72/194 (37%), Gaps = 18/194 (9%)
Query: 36 PSRARGPPGRPSL-RSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P AR P PSL R HPT A + + EA A P AP+ + A +G
Sbjct: 296 PGSAR-PAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAP-PAAPSPPDSPA-EG 352
Query: 95 RGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYG---RAPTASRTGPGAPAEGA 151
R I A +G G RR P P SV R A R G A A G
Sbjct: 353 RLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGR 412
Query: 152 RAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR--RGEGP 209
R +PR A + +RSQ E L G V P A P PPR RG P
Sbjct: 413 RGSPR-------ARKASRSQS--ETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAP 463
Query: 210 LLATAFAAFKLPWR 223
LA A WR
Sbjct: 464 TLAAQAAGSCRRWR 477
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 43.1 bits (100), Expect = 3e-04
Identities = 45/111 (40%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 52 SHPTQRARRAGEGPARA--RLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQ 109
+H + + R A P RA +L + HGP APA R+ A K GA K +
Sbjct: 1445 AHSSSKGREAPGRPPRAVPKLGVPPSSPTHGP-APA-CRSGAAKAVGAPKPPVG------ 1496
Query: 110 KGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTG--PGAPAEGARAAPREG 158
GGKG G + A L PSV L TAS TG PG P G RAAPR G
Sbjct: 1497 -GGKGRGLVAGGSRA-LGPSVKL----STASVTGRSPGGPVAGPRAAPRAG 1541
Score = 32.3 bits (72), Expect = 0.53
Identities = 66/250 (26%), Positives = 87/250 (34%), Gaps = 31/250 (12%)
Query: 42 PPGRPSLRSDSHPTQR------ARRAGEGPARARLEAERAGCAHGPGAPARTR-AHAHKG 94
P G PSL S T A AG P RA + + G A PG + A A G
Sbjct: 155 PHGGPSLAPPSTTTSSRDTPGPAGPAGRQPGRAGPDRTK-GLAWSPGPSVQVSVAPAGLG 213
Query: 95 RGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPS-VCLYGRAPTASRTGPGAPAEGARA 153
+ IQA+ + PA L + V A T P A +G
Sbjct: 214 GALSTVTIQAQQCLEGMWSVSRVNSFLPPACLAEAAVAAVAVADTVRECPPVAGPDGLSK 273
Query: 154 APREGGGEAVAERCARSQPSWEGELWG--------VRHLVSLSLPASSGACAPPPLPPRR 205
A GG P G G +R + LSL + PPP P R
Sbjct: 274 AWGRGG--VCTSALVTPTPGSVGGSTGPSAAASFFIRAMQKLSLASKRKKPHPPPPPATR 331
Query: 206 GEGPLLATAFAAFKLPWRLRLLPPPCLHCLF---AQHTDADGGWEKGQTLLPANRRCRSR 262
G T F+ L+L PPP CL ++ D G K + +L R ++
Sbjct: 332 GTS-TYPTDFSGV-----LQLWPPPAPPCLLRAASKTKDNPGSIGKVKVML---RIWPAQ 382
Query: 263 GLTKMAAAVS 272
G + A A+S
Sbjct: 383 GAQRSAEAMS 392
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.7 bits (99), Expect = 4e-04
Identities = 59/209 (28%), Positives = 73/209 (34%), Gaps = 31/209 (14%)
Query: 41 GPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKL 100
GP G+ LR + T +A E P R+ L A GP + A A + R AG
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186
Query: 101 VIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGG 160
V R R P G SV +AS P+ AR P GGG
Sbjct: 187 VGLPR-------PAPSARPRPPTEGPRKSV------SSASEHSTTEPSPAARRRPSAGGG 233
Query: 161 -EAVAERC-----------ARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGE- 207
+ A R ARS PS G H S P A PP + P R +
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDA 292
Query: 208 ----GPLLATAFAAFKLPWRLRLLPPPCL 232
GPL ++ A L+ PP L
Sbjct: 293 APALGPLSSSPLATPSPSAALQSQAPPTL 321
Score = 41.6 bits (96), Expect = 9e-04
Identities = 55/218 (25%), Positives = 78/218 (35%), Gaps = 27/218 (12%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPART------- 87
P S R P R + S +P R +G G + G PG + T
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 88 ----RAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTG 143
R A + GK + A G +T GP P +P++ RA + G
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDT-SGPTPGTPSPAMARRSRA-AGTEVG 188
Query: 144 PGAPAEGAR-AAPREGGGEAVAER----------CARSQPSWEGELWGVRHLVSLSLPAS 192
PA AR P EG ++V+ AR +PS G G++ S SL +S
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG---GLQRPASRSLSSS 245
Query: 193 SGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPP 230
+ + P G A A + P L+ L PP
Sbjct: 246 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 283
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.4 bits (98), Expect = 5e-04
Identities = 54/184 (29%), Positives = 65/184 (35%), Gaps = 27/184 (14%)
Query: 41 GPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKL 100
GP G+ LR + T +A E P R+ L A GP + A A + R AG
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186
Query: 101 VIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGG 160
V R R P G SV +AS P+ AR P GGG
Sbjct: 187 VGLPR-------PAPSARPRPPTEGPRKSV------SSASEHSTTEPSPAARRRPSAGGG 233
Query: 161 -EAVAERC-----------ARSQPSWEGELWGVRHLVSLSLPASSGACAPPPL-PPRRGE 207
+ A R ARS PS G H S P A PP + PPR+
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDA 292
Query: 208 GPLL 211
P L
Sbjct: 293 APAL 296
Score = 41.6 bits (96), Expect = 9e-04
Identities = 55/218 (25%), Positives = 78/218 (35%), Gaps = 27/218 (12%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPART------- 87
P S R P R + S +P R +G G + G PG + T
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 88 ----RAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTG 143
R A + GK + A G +T GP P +P++ RA + G
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDT-SGPTPGTPSPAMARRSRA-AGTEVG 188
Query: 144 PGAPAEGAR-AAPREGGGEAVAER----------CARSQPSWEGELWGVRHLVSLSLPAS 192
PA AR P EG ++V+ AR +PS G G++ S SL +S
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG---GLQRPASRSLSSS 245
Query: 193 SGACAPPPLPPRRGEGPLLATAFAAFKLPWRLRLLPPP 230
+ + P G A A + P L+ L PP
Sbjct: 246 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 283
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.4 bits (98), Expect = 5e-04
Identities = 54/184 (29%), Positives = 65/184 (35%), Gaps = 27/184 (14%)
Query: 41 GPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKL 100
GP G+ LR + T +A E P R+ L A GP + A A + R AG
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177
Query: 101 VIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGG 160
V R R P G SV +AS P+ AR P GGG
Sbjct: 178 VGLPR-------PAPSARPRPPTEGPRKSV------SSASEHSTTEPSPAARRRPSAGGG 224
Query: 161 -EAVAERC-----------ARSQPSWEGELWGVRHLVSLSLPASSGACAPPPL-PPRRGE 207
+ A R ARS PS G H S P A PP + PPR+
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH-PSQPKPKGLQALRPPQVTPPRKDA 283
Query: 208 GPLL 211
P L
Sbjct: 284 APAL 287
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 42.4 bits (98), Expect = 5e-04
Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 9/148 (6%)
Query: 32 HRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPAR-TRAH 90
H P A PP +PS S + A A PAR + E P + R RA
Sbjct: 324 HGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGK---ESPSPRSAPSSQGRGGRAA 380
Query: 91 AHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEG 150
GR + + R+R+ RR P PA S RA ++S +G G A G
Sbjct: 381 GGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPG 440
Query: 151 ARAAP-----REGGGEAVAERCARSQPS 173
P G G+ ER R++P+
Sbjct: 441 PGPEPGSERGHGGHGKRAKERPPRARPA 468
Score = 31.6 bits (70), Expect = 0.90
Identities = 37/159 (23%), Positives = 52/159 (32%), Gaps = 16/159 (10%)
Query: 46 PSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQAR 105
PS S H + + + + +R + G G G+P R + G A
Sbjct: 275 PSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGS--GWGSPQRNGGSGQRSGAHGGRPGSAH 332
Query: 106 TRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAE 165
+ K R A A P+ G+ + R+ P + G RAA G
Sbjct: 333 SPPDKPSSPSPRVRDKAAAA-APTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRR 391
Query: 166 RCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR 204
R RS+ S S P G P P PPR
Sbjct: 392 RRRRSRSS-------------ASAPRRRGRRRPRPAPPR 417
Score = 30.0 bits (66), Expect = 2.6
Identities = 42/178 (23%), Positives = 64/178 (35%), Gaps = 15/178 (8%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGE-GPARARLEAERAGCAHGPGA-PARTRAHAH 92
P R R P R S RAR + + G R A GPG P R H
Sbjct: 403 PRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRG---------APGPGPEPGSERGHGG 453
Query: 93 KGRGAGKLVIQARTRAQKGGKGEETRR-GPAPAGLTPSVCLYGRAPTASRTGPGAPAEGA 151
G+ A + +AR + G RR GP + S + R+ ++SR+ + + A
Sbjct: 454 HGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSA 513
Query: 152 RAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGP 209
P ++ EG RH + + A + + P+ RR + P
Sbjct: 514 EKRPHSPSRSPSPKKPLSRDKDGEGR---ARHSEAEATRARRRSRSYSPIRKRRRDSP 568
>gi|239754584 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239754578 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239749143 PREDICTED: hypothetical protein XP_002346923 [Homo
sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239744970 PREDICTED: hypothetical protein XP_002343319 [Homo
sapiens]
Length = 368
Score = 42.0 bits (97), Expect = 7e-04
Identities = 62/237 (26%), Positives = 80/237 (33%), Gaps = 49/237 (20%)
Query: 8 VLLAEGLASGCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPAR 67
+ L+ GC W L G R P S ARG R+ S P QR RA + P
Sbjct: 113 LFLSSAHFGGCSCHWALERRGKLGRRCPRS-ARG-------RASSPPVQRESRASQDPDH 164
Query: 68 AR------LEAERAGCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGP 121
+ L A A C G A ++A +GR + R Q + P
Sbjct: 165 SAAPGAGGLVARPAECLRGEAASMDSKAR--QGRRPRP---ELRGTTQLSSPWVPRSQLP 219
Query: 122 APAGLTPSVCLYGRAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWGV 181
P+ P L + +G G PA G A A+A RCA
Sbjct: 220 GPSLSRPLRSLRAKLQARHVSGAGHPAAGLVPALWRQDKAALAARCA------------- 266
Query: 182 RHLVSLSLPASSGACAPPPLPPRRGEGPLLATAFAAFKLPWRL-RLLPPPCLHCLFA 237
S S C P P P +G ++ PW L R P PC C F+
Sbjct: 267 ----SCPTAGVSAPCLPGPALPAQGR----------WRRPWILVRRRPRPC--CRFS 307
>gi|239743187 PREDICTED: hypothetical protein XP_002342771 [Homo
sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239743182 PREDICTED: hypothetical protein XP_002342770 [Homo
sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239508856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|239508847 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 7e-04
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG 94
P A G G + R+ P ++RRAG G GPG R AHA
Sbjct: 35 PGHPASGCCGTGTFRTQRRPGDKSRRAGS-----------RGRGAGPGRHDRDSAHAGSM 83
Query: 95 RGAGKLVIQARTRAQKGG-KGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
RGA + R + + +GE T PA V G + SRT G G R
Sbjct: 84 RGARLVPALVRLQLRPPALRGERTPISMPPARPPAGVAFPGASAGPSRTRRGVATAGGRR 143
Query: 154 AP 155
AP
Sbjct: 144 AP 145
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 31 GHRDPPSRARGPP-GRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRA 89
G R P RAR PP GRP R R G R R G P A R
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSAERHTG------RAALARHGQLSRPHAAVR--- 261
Query: 90 HAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
++ +GRGA V A + G +G G A G C RA T S G
Sbjct: 262 NSSRGRGAATSVSAAARPTRGGARGHRRADGRARGG-----CAQLRAGTPSAPGGLQDCR 316
Query: 150 GARAAP-----REGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 203
G + R G + +RS + + L+ L P APPPLPP
Sbjct: 317 GRQGEENAHPFRSGAPFSPHPHASRSTLAAQ--------LLPLPQPPPPPKLAPPPLPP 367
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/182 (31%), Positives = 69/182 (37%), Gaps = 27/182 (14%)
Query: 31 GHRDPPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAH 90
G R+ R G S+R +HP A PAR+ E RA PA TR H
Sbjct: 195 GKREMQGCQRVCSGDRSVRRRAHPPVHA------PARSHPEEARA-----LALPAPTRVH 243
Query: 91 AH-KGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
R G+ + R R+ G + PA TP L GR P A+ GP PA
Sbjct: 244 LRLAARCVGR---RRRERSDPPGSYHD----PALGLRTPGPILEGRGPRAA--GP-CPAN 293
Query: 150 GARAAPREGG-----GEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPR 204
A +GG G A A+R A S G V S PA+ C PPR
Sbjct: 294 TAAVDKTQGGWRAVSGRAEAQRRAADHHSRLRTALGSGLRVCSSRPAAPSVCPVRGPPPR 353
Query: 205 RG 206
G
Sbjct: 354 PG 355
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.2 bits (95), Expect = 0.001
Identities = 79/286 (27%), Positives = 91/286 (31%), Gaps = 63/286 (22%)
Query: 37 SRARGPPGRPSLR---SDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHK 93
+RARG G R SH T R GE +R L + + A P AHA
Sbjct: 257 TRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPL-LDPSKAARASALPTARVAHASP 315
Query: 94 GR--------GAGK---LVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRA------ 136
G GK V++ R EE R L+ RA
Sbjct: 316 PSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGS 375
Query: 137 ------PTASRTGPGAPAEGARAAP---REGGG----------------------EAVAE 165
PT SR PG PA A P R GGG A+A
Sbjct: 376 SGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALAT 435
Query: 166 RCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLLAT-------AFAAF 218
R P G L GV H LS PA +PP P R GP L A A
Sbjct: 436 RRGSRAPRPVGVLRGVPHFRPLSSPAPQ---SPPRSPSVRAFGPRLGAGRLSCPQAPRAA 492
Query: 219 KLPWRLRLLPPPCLHCLFAQHTDADGGWEKGQTLLPANRRCRSRGL 264
LP L P P H Q + GG + A R R G+
Sbjct: 493 ALPGIAVLAPSPA-HDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 537
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 31 GHRDPPSRARGPP-GRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRA 89
G R P RAR PP GRP R R G R R G P A R
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSAERHTG------RAALARHGQLSRPHAAVR--- 261
Query: 90 HAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
++ +GRGA V A + G +G G A G C RA T S G
Sbjct: 262 NSSRGRGAATSVSAAARPTRGGARGHRRADGRARGG-----CAQLRAGTPSAPGGLQDCR 316
Query: 150 GARAAP-----REGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 203
G + R G + +RS + + L+ L P APPPLPP
Sbjct: 317 GRQGEENAHPFRSGAPFSPHPHASRSTLAAQ--------LLPLPQPPPPPKLAPPPLPP 367
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 41.2 bits (95), Expect = 0.001
Identities = 79/286 (27%), Positives = 91/286 (31%), Gaps = 63/286 (22%)
Query: 37 SRARGPPGRPSLR---SDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHK 93
+RARG G R SH T R GE +R L + + A P AHA
Sbjct: 257 TRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPL-LDPSKAARASALPTARVAHASP 315
Query: 94 GR--------GAGK---LVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRA------ 136
G GK V++ R EE R L+ RA
Sbjct: 316 PSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGS 375
Query: 137 ------PTASRTGPGAPAEGARAAP---REGGG----------------------EAVAE 165
PT SR PG PA A P R GGG A+A
Sbjct: 376 SGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALAT 435
Query: 166 RCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLLAT-------AFAAF 218
R P G L GV H LS PA +PP P R GP L A A
Sbjct: 436 RRGSRAPRPVGVLRGVPHFRPLSSPAPQ---SPPRSPSVRAFGPRLGAGRLSCPQAPRAA 492
Query: 219 KLPWRLRLLPPPCLHCLFAQHTDADGGWEKGQTLLPANRRCRSRGL 264
LP L P P H Q + GG + A R R G+
Sbjct: 493 ALPGIAVLAPSPA-HDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 537
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 31 GHRDPPSRARGPP-GRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRA 89
G R P RAR PP GRP R R G R R G P A R
Sbjct: 211 GARPSPPRARQPPSGRPRPRRTRLLGSAERHTG------RAALARHGQLSRPHAAVR--- 261
Query: 90 HAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAE 149
++ +GRGA V A + G +G G A G C RA T S G
Sbjct: 262 NSSRGRGAATSVSAAARPTRGGARGHRRADGRARGG-----CAQLRAGTPSAPGGLQDCR 316
Query: 150 GARAAP-----REGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPP 203
G + R G + +RS + + L+ L P APPPLPP
Sbjct: 317 GRQGEENAHPFRSGAPFSPHPHASRSTLAAQ--------LLPLPQPPPPPKLAPPPLPP 367
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 41.2 bits (95), Expect = 0.001
Identities = 53/190 (27%), Positives = 62/190 (32%), Gaps = 14/190 (7%)
Query: 36 PSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGP-GAPARTRAHAHKG 94
P RG PG R + P + G R E GP G P H G
Sbjct: 2127 PKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPG 2186
Query: 95 R-GAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
GA L A + G KGE GP GLT PT + PG P
Sbjct: 2187 PPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLT--------GPTGAVGLPGPPGPSGLV 2238
Query: 154 APREGGG--EAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLL 211
P+ G V E P +G S +P S G P P+ P+ GP
Sbjct: 2239 GPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPG--LPGPVGPKGEPGPTG 2296
Query: 212 ATAFAAFKLP 221
A A LP
Sbjct: 2297 APGQAVVGLP 2306
Score = 36.2 bits (82), Expect = 0.036
Identities = 35/127 (27%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Query: 40 RGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKGRGAGK 99
RGPPG P R R GP + G PG+P G+ K
Sbjct: 1388 RGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEK 1447
Query: 100 LVIQ---ARTRAQKGGKGEETRRGP----APAGLTPSVCLYGRAPTASRTGPGAPAEGAR 152
+ Q G GE+ RGP P G G A GP PA G+R
Sbjct: 1448 GDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPA-GSR 1506
Query: 153 AAPREGG 159
P G
Sbjct: 1507 GLPGVAG 1513
Score = 33.1 bits (74), Expect = 0.31
Identities = 41/137 (29%), Positives = 46/137 (33%), Gaps = 21/137 (15%)
Query: 29 ATGHRDPPSRARGP--PGRPSLR-SDSHPTQRARRAGEGPARARLEAERAGCA---HGPG 82
A G P RA P PG P L+ S P R GP + E G GPG
Sbjct: 1303 ADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPG 1362
Query: 83 APARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRT 142
P R G +G G+ RGP GL P + G
Sbjct: 1363 LPGRKGDPGPSG-----------PPGPRGPLGDPGPRGPP--GL-PGTAMKGDKGDRGER 1408
Query: 143 GPGAPAEGARAAPREGG 159
GP P EG AP E G
Sbjct: 1409 GPPGPGEGG-IAPGEPG 1424
Score = 33.1 bits (74), Expect = 0.31
Identities = 48/188 (25%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 30 TGHRDPPSRARGP---PGRPSLRSD------SHPTQRA--RRAGEGPARARLEAERAGCA 78
+G + PP + GP PG L+ D P A R GP+ E + G
Sbjct: 1984 SGEQGPPGK-EGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGI- 2041
Query: 79 HGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPT 138
PG P R GR + R +KG +GE+ R GP TP P
Sbjct: 2042 --PGLPGRAGGVGEAGRPG-----ERGERGEKGERGEQGRDGPPGLPGTPGP-PGPPGPK 2093
Query: 139 ASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAP 198
S PG G + P G + P + + G++ P G
Sbjct: 2094 VSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKG--DRGEPGPRGQDGN 2151
Query: 199 PPLPPRRG 206
P LP RG
Sbjct: 2152 PGLPGERG 2159
Score = 32.7 bits (73), Expect = 0.40
Identities = 38/144 (26%), Positives = 46/144 (31%), Gaps = 16/144 (11%)
Query: 31 GHRDPPSR-----ARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPA 85
G R PP A G PG P L P G+ + E G PG+P
Sbjct: 1406 GERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPG 1465
Query: 86 RTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRG----PAPAGLTPSVCLYGRAPTASR 141
RG + R G GE +G P PAG + GR
Sbjct: 1466 E-----QGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGP 1520
Query: 142 TGPGAPA--EGARAAPREGGGEAV 163
GP P +G + P G AV
Sbjct: 1521 EGPPGPTGRQGEKGEPGRPGDPAV 1544
Score = 30.4 bits (67), Expect = 2.0
Identities = 39/154 (25%), Positives = 47/154 (30%), Gaps = 29/154 (18%)
Query: 30 TGHRDPPSRA-----RGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAP 84
TG PP + +G PGRP P R GE G PG P
Sbjct: 1600 TGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGE-----------KGDEGPPGDP 1648
Query: 85 ARTRAHAHKG-RGAGKLVIQARTRAQKGGKGEETRRG-PAPAGLTPSVCLYGRAPTASRT 142
+G RGA + + +G GE+ R G P +G P R
Sbjct: 1649 GLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSG-----------PKGDRG 1697
Query: 143 GPGAPAEGARAAPREGGGEAVAERCARSQPSWEG 176
PG P R G E R Q G
Sbjct: 1698 EPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRG 1731
Score = 30.4 bits (67), Expect = 2.0
Identities = 55/196 (28%), Positives = 65/196 (33%), Gaps = 51/196 (26%)
Query: 41 GPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCAHGPGAPARTRAHAHKG----RG 96
GPPG P L P + R G R G PG R + G RG
Sbjct: 1643 GPPGDPGL-----PGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRG 1697
Query: 97 A-------GKLVIQ---ARTRAQKGGKGEETRRGP-APAGLTPSVCLYGRAPTASRTGPG 145
G+LV AR + + G +G+E RGP GL PG
Sbjct: 1698 EPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGL-----------------PG 1740
Query: 146 APA----EGARAAPREGGGEAV----AERCARSQPSWEGE--LWGVRHLVSLSLPASSGA 195
AP EG R P G V E+ R P +G L G S P +
Sbjct: 1741 APGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAG 1800
Query: 196 CAPPP----LPPRRGE 207
A P LP RGE
Sbjct: 1801 KAGDPGRDGLPGLRGE 1816
Score = 30.0 bits (66), Expect = 2.6
Identities = 46/181 (25%), Positives = 55/181 (30%), Gaps = 45/181 (24%)
Query: 40 RGPPGRPSLRSD-------SHPTQRARRAGEGPARARL---EAERAGCAHGPGAPARTRA 89
RGPPG + D ++ R GPA +R A R G G P T
Sbjct: 1470 RGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGR 1529
Query: 90 HAHKG---RGAGKLVIQARTRAQKGGKGEETRRGP----------APAGLT--------- 127
KG R V+ KG KG+ GP P GL
Sbjct: 1530 QGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKG 1589
Query: 128 -----PSVCLYGRA-------PTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWE 175
+ L GRA P + PG P PR GE V E+ P
Sbjct: 1590 DPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGE-VGEKGDEGPPGDP 1648
Query: 176 G 176
G
Sbjct: 1649 G 1649
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.8 bits (94), Expect = 0.001
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 17/181 (9%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCA-HGPGAPARTRAHAHK 93
P + A G PG + P RAR G GP R + R GP PA +
Sbjct: 75 PAAPAEGAPGAAP---EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPE 131
Query: 94 GRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARA 153
G + A G + PAPAG G A A+R GPG P G
Sbjct: 132 GSAGSCAPVPAAAAVAAGPE-------PAPAGPAKPA---GPAALAARAGPG-PGPGPGP 180
Query: 154 APREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLP-ASSGACAPPPLPPRRGEGPLLA 212
P G G+ A++ + L H + ++ ++G A PLP G ++
Sbjct: 181 GPGPGPGKPAGPGAAQTL-NGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239
Query: 213 T 213
T
Sbjct: 240 T 240
Score = 37.4 bits (85), Expect = 0.016
Identities = 49/191 (25%), Positives = 64/191 (33%), Gaps = 25/191 (13%)
Query: 35 PPSRARGPPGRPSLRSDSHPTQRARRAGEGPARARLEAERAGCA--HGPGAPARTRAHAH 92
PP GPP Q AG PA A AG + GPGA A A
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
Query: 93 KGRGAGKLVIQARTRAQKGGKGEETRRGPA--PAGLTPSVCLYGRAPTASRTGPGAPAEG 150
K ++V A AQ GPA A + + G P+ + P PA G
Sbjct: 343 KAESPKRVVQAAPPAAQ-----TLAASGPASTAASMVIGPTMQGALPSPAAVPP--PAPG 395
Query: 151 ARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPL 210
+G AV + +R+ + G+R P L PR + P
Sbjct: 396 TPTGLPKGAAGAVTQSLSRTPTATTS---GIR-----------ATLTPTVLAPRLPQPPQ 441
Query: 211 LATAFAAFKLP 221
T F+LP
Sbjct: 442 NPTNIQNFQLP 452
Score = 34.3 bits (77), Expect = 0.14
Identities = 54/202 (26%), Positives = 63/202 (31%), Gaps = 38/202 (18%)
Query: 34 DPPSRARGPPGRPSLRSDSHPTQRARRAGEGPA------RARLEAERAGCAHGPGAPART 87
+PP R PG + P+ R GPA R E CA P A A
Sbjct: 88 EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147
Query: 88 RAHAHKGRGAGKLVIQARTRAQKG-GKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGA 146
G K A A+ G G G GP P GPG
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP-------------------GPGK 188
Query: 147 PAEGARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASS----------GAC 196
PA G AA G A+ + P+ G L+ L PA+ GA
Sbjct: 189 PA-GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAA 247
Query: 197 APP-PLPPRRGEGPLLATAFAA 217
APP P P P A AA
Sbjct: 248 APPAPAAPSPPAAPAPAAPAAA 269
Score = 28.5 bits (62), Expect = 7.6
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 40/118 (33%)
Query: 122 APAGLTPSVCLYGRAPTASRTGPGAPAEGA-RAAP--------REGGG------------ 160
A AG + + G A+ GP APAEGA AAP R GGG
Sbjct: 53 AAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRR 112
Query: 161 ----EAVAERCARSQPSWEGELWGVRHLVSLSLPASSGACAPPPLPPRRGEGPLLATA 214
A A+ +P EG S+G+CAP P GP A A
Sbjct: 113 PLVPAGPAPPAAKLRPPPEG---------------SAGSCAPVPAAAAVAAGPEPAPA 155
>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
Length = 598
Score = 39.7 bits (91), Expect = 0.003
Identities = 66/219 (30%), Positives = 79/219 (36%), Gaps = 35/219 (15%)
Query: 17 GCRACWELASFWATGHRDPPSRARGPPGRPSLRSDSHPTQRARRAGE-GPARARLEAERA 75
G A +E+A G S G G P DS P +AG GPAR AE
Sbjct: 24 GEEAAFEVARPGDQGKAGGGSPGWGCAGIP----DSAPGAGVLQAGAVGPARGGQGAEEV 79
Query: 76 GCAHGPGAPARTRAHAHKGRGAGKLVIQARTRAQKGGKGEETRRGPAPAGLTPSVCLY-G 134
G + G G R R H A +L+ R +GG GE TP L G
Sbjct: 80 GESAGGGEERRVR---HPQAPALRLL----NRKPQGGSGEIK---------TPENDLQRG 123
Query: 135 RAPTASRTGPGAPAEGARAAPREGGGEAVAERCARSQPSWEGELWGVRHLVSLSLPASSG 194
R RT P AP G R+ +E RS P G G L +G
Sbjct: 124 RLSRGPRTAPPAPGMGDRSGQQE-----------RSVPHSPGAPVGTSAAAVNGL-LHNG 171
Query: 195 ACAPPPLPPR-RGEGPLLATAFAAFKLPWRLRLLPPPCL 232
PP PP GP+ + A +LP L P P L
Sbjct: 172 FHPPPVQPPHVCSRGPVGGSDAAPQRLPLLPELQPQPLL 210
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,394,061
Number of Sequences: 37866
Number of extensions: 945236
Number of successful extensions: 7223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 672
Number of HSP's that attempted gapping in prelim test: 6391
Number of HSP's gapped (non-prelim): 1426
length of query: 301
length of database: 18,247,518
effective HSP length: 102
effective length of query: 199
effective length of database: 14,385,186
effective search space: 2862652014
effective search space used: 2862652014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.