Guide to the Human Genome
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Name: LOC100132346 Sequence: fasta or formatted (103aa) NCBI GI: 169210012
Description:

PREDICTED: similar to heat shock 10 kDa protein 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8          6           2
 C cysteine            0.0          0           0
 D aspartate           6.8          7           2
 E glutamate           5.8          6           1
 F phenylalanine       4.9          5           1
 G glycine            13.6         14           2
 H histidine           1.0          1           1
 I isoleucine          4.9          5           1
 K lysine             10.7         11           2
 L leucine             9.7         10           2
 M methionine          2.9          3           1
 N asparagine          0.0          0           0
 P proline             3.9          4           1
 Q glutamine           3.9          4           1
 R arginine            4.9          5           1
 S serine              4.9          5           1
 T threonine           2.9          3           1
 V valine             11.7         12           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to heat shock 10 kDa protein 1 [... 
HSPE1                 0.916   heat shock 10kDa protein 1 
LOC100292290          0.777   PREDICTED: similar to heat shock 10kDa protein 1 [H...
LOC100292829          0.732   PREDICTED: similar to heat shock 10kDa protein 1 [H...
LOC100290437          0.732   PREDICTED: hypothetical protein XP_002346492 
LOC100287159          0.732   PREDICTED: hypothetical protein XP_002342349 
SUPT16H               0.017   chromatin-specific transcription elongation factor la...
RUVBL2                0.017   RuvB-like 2 
ANKS6                 0.017   ankyrin repeat and sterile alpha motif domain contai...
ERCC4                 0.011   excision repair cross-complementing rodent repair def...
PPP1R3A               0.011   protein phosphatase 1, regulatory (inhibitor) subun...
MBLAC2                0.011   beta-lactamase-like 
WDFY4                 0.011   WDFY family member 4 
FECH                  0.006   ferrochelatase isoform b precursor 
NECAP1                0.006   NECAP endocytosis associated 1 
RIMS4                 0.006   regulating synaptic membrane exocytosis 4 
HIVEP2                0.006   human immunodeficiency virus type I enhancer bindin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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