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Search of human proteins with 169208040
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169208040 PREDICTED: similar to WAS protein homolog
associated with actin, golgi membranes and microtubules isoform 1
[Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169208040 PREDICTED: similar to WAS protein homolog associate... 258 9e-70
gi|122937271 WAS protein homolog associated with actin, golgi me... 239 6e-64
gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo sa... 216 4e-57
gi|239745156 PREDICTED: similar to WAS protein homolog associate... 216 4e-57
gi|239745125 PREDICTED: similar to WAS protein homolog associate... 215 7e-57
gi|195947369 junction-mediating and regulatory protein [Homo sap... 132 8e-32
gi|40789306 zinc finger protein 365 isoform C [Homo sapiens] 34 0.037
gi|40789310 zinc finger protein 365 isoform B [Homo sapiens] 34 0.037
gi|148596972 zinc finger protein 365 isoform A [Homo sapiens] 34 0.037
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 33 0.064
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 32 0.11
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 32 0.11
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 32 0.11
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 32 0.11
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 32 0.11
gi|197313728 pleckstrin homology-like domain, family B, member 2... 32 0.11
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 32 0.11
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 32 0.11
gi|28269672 serologically defined colon cancer antigen 8 [Homo s... 32 0.11
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.14
gi|148746218 TAO kinase 3 [Homo sapiens] 32 0.14
gi|63053524 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|63053522 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|31543910 ubiquitin specific protease 1 [Homo sapiens] 31 0.24
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 31 0.24
gi|148746195 trichohyalin [Homo sapiens] 31 0.32
gi|157837985 kazrin isoform E [Homo sapiens] 31 0.32
gi|65301128 kazrin isoform C [Homo sapiens] 31 0.32
gi|65301130 kazrin isoform B [Homo sapiens] 31 0.32
gi|63999741 kazrin isoform C [Homo sapiens] 31 0.32
>gi|169208040 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules isoform 1
[Homo sapiens]
Length = 131
Score = 258 bits (659), Expect = 9e-70
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY 120
PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY
Sbjct: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY 120
Query: 121 DPCESPEELSH 131
DPCESPEELSH
Sbjct: 121 DPCESPEELSH 131
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 239 bits (609), Expect = 6e-64
Identities = 121/129 (93%), Positives = 125/129 (96%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
MQKEMEQD KRFGQAAWATAIPRLEKL+LMLA+ETLQLMRAKEL LN KRAEIQGKMEDL
Sbjct: 313 MQKEMEQDAKRFGQAAWATAIPRLEKLQLMLARETLQLMRAKELCLNHKRAEIQGKMEDL 372
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY 120
PEQEKN NVVDELE+QFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY
Sbjct: 373 PEQEKNTNVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY 432
Query: 121 DPCESPEEL 129
DPCE+PEEL
Sbjct: 433 DPCENPEEL 441
>gi|169208753 PREDICTED: similar to WHDC1-like protein 1 [Homo
sapiens]
Length = 130
Score = 216 bits (550), Expect = 4e-57
Identities = 111/113 (98%), Positives = 113/113 (100%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 76
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEK 113
PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK++
Sbjct: 77 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKDE 129
>gi|239745156 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules isoform 2
[Homo sapiens]
Length = 130
Score = 216 bits (550), Expect = 4e-57
Identities = 111/113 (98%), Positives = 113/113 (100%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 76
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEK 113
PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK++
Sbjct: 77 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKDE 129
>gi|239745125 PREDICTED: similar to WAS protein homolog associated
with actin, golgi membranes and microtubules [Homo
sapiens]
Length = 130
Score = 215 bits (548), Expect = 7e-57
Identities = 111/113 (98%), Positives = 112/113 (99%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL
Sbjct: 17 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 76
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEK 113
PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK +
Sbjct: 77 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKNE 129
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 132 bits (332), Expect = 8e-32
Identities = 65/125 (52%), Positives = 95/125 (76%)
Query: 5 MEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQE 64
M D K+FG+A+WA A R+EKL+ +++ETLQ+MRAKE+ L +++ ++ +M+ L
Sbjct: 458 MRADQKKFGKASWAAAAERMEKLQYAVSKETLQMMRAKEICLEQRKHALKEEMQSLRGGT 517
Query: 65 KNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYYDPCE 124
+ I +D+LE +Y++QL+LYEV+FEILK EE+LLT QL+S+KRLI EK+DEVVYYD E
Sbjct: 518 EAIARLDQLEADYYDLQLQLYEVQFEILKCEELLLTAQLESIKRLISEKRDEVVYYDTYE 577
Query: 125 SPEEL 129
S E +
Sbjct: 578 SMEAM 582
>gi|40789306 zinc finger protein 365 isoform C [Homo sapiens]
Length = 462
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 2 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 59
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 60 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 100
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|40789310 zinc finger protein 365 isoform B [Homo sapiens]
Length = 333
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 2 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 59
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 60 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 100
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|148596972 zinc finger protein 365 isoform A [Homo sapiens]
Length = 407
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 2 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLM--RAKELYLNRKRAEIQGKMED 59
+ + + R +A T R++KL LAQ+T +L+ RA + L +K+ E+Q +
Sbjct: 158 EAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERA 217
Query: 60 LPEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLT 100
L Q VD ++ L E + E+L+ EE ++T
Sbjct: 218 LNRQ------VDVAVEMIAVLRQRLTESEEELLRKEEEVVT 252
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 33.1 bits (74), Expect = 0.064
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 21 IPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEI 80
I L+ +L + L++ RAK + AE K + + E +N ++EL++Q +
Sbjct: 1075 IETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKE 1134
Query: 81 QLELYEV--KFEILK---NEEILLTTQLDSLKRLIKE 112
+ +L + + E++K + L+ ++ +RL+KE
Sbjct: 1135 KKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1171
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 4 EMEQDVKRFGQAAWATAIPRLEKLKLML--AQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
E + + R +A + LEK K+ L QE M+ ++ L R+ E + + ++
Sbjct: 94 EEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEAL 153
Query: 62 E-----QEKNINVVDELEM-----QFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
E E+ + D +EM + E + E + + E LK LTT L+ LK I+
Sbjct: 154 EAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIE 213
Query: 112 EK 113
EK
Sbjct: 214 EK 215
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 4 EMEQDVKRFGQAAWATAIPRLEKLKLML--AQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
E + + R +A + LEK K+ L QE M+ ++ L R+ E + + ++
Sbjct: 208 EEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEAL 267
Query: 62 E-----QEKNINVVDELEM-----QFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
E E+ + D +EM + E + E + + E LK LTT L+ LK I+
Sbjct: 268 EAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIE 327
Query: 112 EK 113
EK
Sbjct: 328 EK 329
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 4 EMEQDVKRFGQAAWATAIPRLEKLKLML--AQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
E + + R +A + LEK K+ L QE M+ ++ L R+ E + + ++
Sbjct: 94 EEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEAL 153
Query: 62 E-----QEKNINVVDELEM-----QFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
E E+ + D +EM + E + E + + E LK LTT L+ LK I+
Sbjct: 154 EAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIE 213
Query: 112 EK 113
EK
Sbjct: 214 EK 215
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 4 EMEQDVKRFGQAAWATAIPRLEKLKLML--AQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
E + + R +A + LEK K+ L QE M+ ++ L R+ E + + ++
Sbjct: 228 EEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEAL 287
Query: 62 E-----QEKNINVVDELEM-----QFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
E E+ + D +EM + E + E + + E LK LTT L+ LK I+
Sbjct: 288 EAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIE 347
Query: 112 EK 113
EK
Sbjct: 348 EK 349
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 32.3 bits (72), Expect = 0.11
Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 2 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
+ ++E ++ FG PR+ +K ++ ++ KE K +++ ++ +
Sbjct: 734 KSKLESELANFG--------PRINDIKRIIQSREREMKDLKE-----KMNQVEDEVFEEF 780
Query: 62 EQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYYD 121
+E + + E E + + Q E+ + + E +N++ L QLD K +KE QD+V ++
Sbjct: 781 CREIGVRNIREFEEEKVKRQNEIAKKRLEF-ENQKTRLGIQLDFEKNQLKEDQDKVHMWE 839
Query: 122 PCESPEE 128
+E
Sbjct: 840 QTVKKDE 846
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 32.3 bits (72), Expect = 0.11
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 34 ETLQLMRAKEL--YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEI 91
ET +LM+ KE+ +LNRK AE++ + + E+ K+ +++D +E + +E LE +++ E
Sbjct: 663 ETTELMKEKEILDHLNRKIAELEKNI--VGEKTKDADLLD-VESKHFE-DLEFQQLEHES 718
Query: 92 LKNEEILLTTQLDSLKRLIKEKQDEVV 118
+EE TQ L R + E Q +V
Sbjct: 719 RLDEEKENLTQ--QLLREVAEYQRNIV 743
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 32.3 bits (72), Expect = 0.11
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 34 ETLQLMRAKEL--YLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFEI 91
ET +LM+ KE+ +LNRK AE++ + + E+ K+ +++D +E + +E LE +++ E
Sbjct: 636 ETTELMKEKEILDHLNRKIAELEKNI--VGEKTKDADLLD-VESKHFE-DLEFQQLEHES 691
Query: 92 LKNEEILLTTQLDSLKRLIKEKQDEVV 118
+EE TQ L R + E Q +V
Sbjct: 692 RLDEEKENLTQ--QLLREVAEYQRNIV 716
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 34/132 (25%)
Query: 15 AAWAT-----AIPRLEKL---------KLMLAQETLQLMRAKELYLNRKRAEIQGKMED- 59
A W T AI R E+L +L A+E ++ + AK L + + +Q ++ED
Sbjct: 1372 AQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNEVEDL 1431
Query: 60 -------------LPEQEKNIN-VVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDS 105
L ++++N + V+ E + ++ E Q EL E + E L+T+L
Sbjct: 1432 MLDVERSNAACAALDKKQRNFDKVLSEWKQKYEETQAEL-----EASQKESRSLSTELFK 1486
Query: 106 LKRLIKEKQDEV 117
+K + +E D++
Sbjct: 1487 VKNVYEESLDQL 1498
>gi|28269672 serologically defined colon cancer antigen 8 [Homo
sapiens]
Length = 713
Score = 32.3 bits (72), Expect = 0.11
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 QKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLP 61
++ D FG+AA A LEKLKL +E ++ ++ +L AE Q EDL
Sbjct: 203 KRPFSHDNADFGKAASAGEQLELEKLKLTY-EEKCEIEESQLKFLRNDLAEYQRTCEDLK 261
Query: 62 EQEKN 66
EQ K+
Sbjct: 262 EQLKH 266
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.0 bits (71), Expect = 0.14
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 15 AAWAT-----AIPRLEKL---------KLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
A W T AI R E+L +L ++E ++ + AK L + + +QG++EDL
Sbjct: 1370 AQWRTKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGEVEDL 1429
Query: 61 PEQEKNIN----VVDELEMQF------YEIQLELYEVKFEILKNEEILLTTQLDSLKRLI 110
+ N +D+ + F ++ + E + + E E L+T+L LK
Sbjct: 1430 MVDVERANSLAAALDKKQRNFDKVLAEWKTKCEESQAELEASLKESRSLSTELFKLKNAY 1489
Query: 111 KEKQDEV 117
+E D++
Sbjct: 1490 EEALDQL 1496
>gi|148746218 TAO kinase 3 [Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 0.14
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 25 EKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDEL----EMQFYEI 80
+ + M+A + L+L A+E R ++Q +ME L + I + E E+Q E
Sbjct: 774 QSINEMMASQALRLDEAQEAECQALRLQLQQEMELLNAYQSKIKMQTEAQHERELQKLEQ 833
Query: 81 QLELYEVKFEILKNEEI--LLTTQLDSLKRLIKEKQDEVVYYD 121
++ L E EE+ L + + +K L++ ++ E+ +D
Sbjct: 834 RVSLRRAHLEQKIEEELAALQKERSERIKNLLERQEREIETFD 876
Score = 28.5 bits (62), Expect = 1.6
Identities = 22/95 (23%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 24 LEKLKLMLAQETLQLMRAKELYLNRKRA-EIQGK-MEDLPEQEKNINVVDELEMQFYEIQ 81
L+KL++ L + Q +L N++R E+ K + +L +Q KN+ ++ + ++
Sbjct: 667 LQKLRMDLIRLQHQTELENQLEYNKRRERELHRKHVMELRQQPKNLKAMEMQIKKQFQDT 726
Query: 82 LELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDE 116
++ +++ LKN ++ +T + + K ++K +DE
Sbjct: 727 CKVQTKQYKALKNHQLEVTPK-NEHKTILKTLKDE 760
>gi|63053524 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 33 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 75
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|63053522 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 33 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 75
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|31543910 ubiquitin specific protease 1 [Homo sapiens]
Length = 785
Score = 31.2 bits (69), Expect = 0.24
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 33 QETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEM 75
QET QL++ +E+ + AE+ K+E++P ++ +N ++ +EM
Sbjct: 212 QETCQLLKKEEV---KNVAELPTKVEEIPHPKEEMNGINSIEM 251
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 31.2 bits (69), Expect = 0.24
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 23 RLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQL 82
RL K + L ++ +L ++ L+++ AE Q EDL ++K+ +LE Q E+Q
Sbjct: 415 RLWKKEERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSAL---QLEQQVKELQE 471
Query: 83 ELYEVKFEILKNEEILLTTQL 103
+L E E ++ L TQL
Sbjct: 472 KLDEEHLEAASHQNQQLETQL 492
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 30.8 bits (68), Expect = 0.32
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
+Q+E EQ ++ + R + K L QE QL+R + + E Q + E+
Sbjct: 996 LQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEE 1055
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYY 120
+QE+ + +E E + + Y + E+ + EE LL + + +R +E+Q
Sbjct: 1056 LQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQ------ 1109
Query: 121 DPCESPEEL 129
C EEL
Sbjct: 1110 --CREEEEL 1116
Score = 30.4 bits (67), Expect = 0.41
Identities = 28/114 (24%), Positives = 53/114 (46%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDL 60
+Q+E EQ + + + R + + L QE QL+R + R+ E Q + E+
Sbjct: 1056 LQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEE 1115
Query: 61 PEQEKNINVVDELEMQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQ 114
+QE+ + +E E + + Y + E+ + EE LL + + +R E+Q
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQ 1169
Score = 26.9 bits (58), Expect = 4.6
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 31 LAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLELYEVKFE 90
L QE QL+R + R+ E Q + E+ +QE+ + +E E + + Y + E
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175
Query: 91 ILKNEEILLTTQLDSLKRLIKEKQ 114
+ + EE LL + + +R +E+Q
Sbjct: 1176 LQQEEEQLLREEQEK-RRQERERQ 1198
Score = 26.6 bits (57), Expect = 6.0
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 25 EKLKLMLAQETLQLMRAKELYLNRKRAEIQGKMEDLPEQEKNINVVDELEMQFYEIQLEL 84
+K + +L +E + R + R+ E+Q + E L +E+ E E Q
Sbjct: 968 QKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQ-------- 1019
Query: 85 YEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYYDPCESPEE 128
Y K E+ + EE LL + + KR ++E++ + + + EE
Sbjct: 1020 YRKKDELQQEEEQLLREERE--KRRLQERERQYREEEELQQEEE 1061
>gi|157837985 kazrin isoform E [Homo sapiens]
Length = 775
Score = 30.8 bits (68), Expect = 0.32
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELY--LNRKRAEIQGKME 58
M++ + +D++ Q ++ + +L++ LAQ+ +L RAKE + R ++G+
Sbjct: 95 MKEMLAKDLEE-SQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKT 153
Query: 59 DLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
DL Q + + E ++ YE + E + L E+ LL + L+R K
Sbjct: 154 DLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAK 213
Query: 112 EKQD 115
E D
Sbjct: 214 EATD 217
>gi|65301128 kazrin isoform C [Homo sapiens]
Length = 327
Score = 30.8 bits (68), Expect = 0.32
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELY--LNRKRAEIQGKME 58
M++ + +D++ Q ++ + +L++ LAQ+ +L RAKE + R ++G+
Sbjct: 1 MKEMLAKDLEE-SQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKT 59
Query: 59 DLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
DL Q + + E ++ YE + E + L E+ LL + L+R K
Sbjct: 60 DLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAK 119
Query: 112 EKQD 115
E D
Sbjct: 120 EATD 123
>gi|65301130 kazrin isoform B [Homo sapiens]
Length = 415
Score = 30.8 bits (68), Expect = 0.32
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELY--LNRKRAEIQGKME 58
M++ + +D++ Q ++ + +L++ LAQ+ +L RAKE + R ++G+
Sbjct: 89 MKEMLAKDLEE-SQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKT 147
Query: 59 DLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
DL Q + + E ++ YE + E + L E+ LL + L+R K
Sbjct: 148 DLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAK 207
Query: 112 EKQD 115
E D
Sbjct: 208 EATD 211
>gi|63999741 kazrin isoform C [Homo sapiens]
Length = 327
Score = 30.8 bits (68), Expect = 0.32
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 1 MQKEMEQDVKRFGQAAWATAIPRLEKLKLMLAQETLQLMRAKELY--LNRKRAEIQGKME 58
M++ + +D++ Q ++ + +L++ LAQ+ +L RAKE + R ++G+
Sbjct: 1 MKEMLAKDLEE-SQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKT 59
Query: 59 DLPEQEKNINVVDELE-------MQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIK 111
DL Q + + E ++ YE + E + L E+ LL + L+R K
Sbjct: 60 DLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAK 119
Query: 112 EKQD 115
E D
Sbjct: 120 EATD 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,488,647
Number of Sequences: 37866
Number of extensions: 172597
Number of successful extensions: 912
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 824
Number of HSP's gapped (non-prelim): 260
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.