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Search of human proteins with 169206069
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens] 253 4e-68
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens] 250 2e-67
gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens] 249 5e-67
gi|51242945 striatin, calmodulin binding protein [Homo sapiens] 117 2e-27
gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens] 107 2e-24
gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens] 107 2e-24
gi|89886480 zinedin isoform 2 [Homo sapiens] 96 6e-21
gi|89886477 zinedin isoform 1 [Homo sapiens] 96 6e-21
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens] 58 2e-09
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 30 0.65
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 29 1.1
gi|149363664 septin 8 isoform d [Homo sapiens] 29 1.1
gi|149363638 septin 8 isoform c [Homo sapiens] 29 1.1
gi|149363689 septin 8 isoform a [Homo sapiens] 29 1.1
gi|149363661 septin 8 isoform b [Homo sapiens] 29 1.1
gi|13376725 coiled-coil domain containing 92 [Homo sapiens] 29 1.1
gi|93102405 hypothetical protein LOC84182 [Homo sapiens] 28 1.5
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho... 28 1.9
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo... 28 1.9
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 28 1.9
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 28 1.9
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 28 1.9
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 28 1.9
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo... 28 2.5
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom... 28 2.5
gi|110349719 titin isoform N2-A [Homo sapiens] 27 3.2
gi|110349717 titin isoform novex-2 [Homo sapiens] 27 3.2
>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 253 bits (645), Expect = 4e-68
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 250 bits (639), Expect = 2e-67
Identities = 126/127 (99%), Positives = 126/127 (99%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPP YDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 249 bits (635), Expect = 5e-67
Identities = 125/127 (98%), Positives = 125/127 (98%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSA KTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPP YDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|51242945 striatin, calmodulin binding protein [Homo sapiens]
Length = 780
Score = 117 bits (293), Expect = 2e-27
Identities = 60/79 (75%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 10 WETGEVQ-AQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
W EV+ AQ + +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 60 WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119
Query: 69 KYGRELNQGDMKPPIYDSD 87
KYG ELNQGDMKPP YDSD
Sbjct: 120 KYGTELNQGDMKPPSYDSD 138
>gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens]
Length = 797
Score = 107 bits (267), Expect = 2e-24
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 9/107 (8%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
++ WE + Q A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
KLKYG ELNQGD+K P ++S+ T + S T + Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180
>gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens]
Length = 713
Score = 107 bits (267), Expect = 2e-24
Identities = 57/107 (53%), Positives = 70/107 (65%), Gaps = 9/107 (8%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
++ WE + Q A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
KLKYG ELNQGD+K P ++S+ T + S T + Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 96.3 bits (238), Expect = 6e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 9/82 (10%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
K+RWE + Q AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPIYDSDS 88
KLK+G +LNQG+ K + + S
Sbjct: 134 KLKFGTDLNQGEKKADVSEQVS 155
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 96.3 bits (238), Expect = 6e-21
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 9/82 (10%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
K+RWE + Q AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPIYDSDS 88
KLK+G +LNQG+ K + + S
Sbjct: 134 KLKFGTDLNQGEKKADVSEQVS 155
>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
Length = 339
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 258 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 288
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 29.6 bits (65), Expect = 0.65
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 21 AKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQGDMK 80
A+ CK +I E K QE L+ D + +K + LKQ+ A+ L ++G+M+
Sbjct: 1109 AELRECKMEI-----EDKKQELLEMD--QALKERNWELKQRAAQVTHLDMTIREHRGEME 1161
Query: 81 PPIYDSDSTLTKQPVNVK 98
I + TL K + +K
Sbjct: 1162 QKIIKLEGTLEKSELELK 1179
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 28.9 bits (63), Expect = 1.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 33 LQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQGDMK 80
LQG + E KK LVR+++ +E L+ +R + R+ + D+K
Sbjct: 1573 LQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLK 1620
>gi|149363664 septin 8 isoform d [Homo sapiens]
Length = 369
Score = 28.9 bits (63), Expect = 1.1
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 255 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 313
Query: 72 RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTE 117
+ ++Q + K + + L ++ R + Q L T++
Sbjct: 314 KRVHQ-EEKRKVEEKRRELEEETNAFNRRKAAVEALQSQALHATSQ 358
>gi|149363638 septin 8 isoform c [Homo sapiens]
Length = 442
Score = 28.9 bits (63), Expect = 1.1
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTE 117
+ ++Q + K + + L ++ R + Q L T++
Sbjct: 374 KRVHQ-EEKRKVEEKRRELEEETNAFNRRKAAVEALQSQALHATSQ 418
>gi|149363689 septin 8 isoform a [Homo sapiens]
Length = 483
Score = 28.9 bits (63), Expect = 1.1
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTE 117
+ ++Q + K + + L ++ R + Q L T++
Sbjct: 374 KRVHQ-EEKRKVEEKRRELEEETNAFNRRKAAVEALQSQALHATSQ 418
>gi|149363661 septin 8 isoform b [Homo sapiens]
Length = 429
Score = 28.9 bits (63), Expect = 1.1
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTE 117
+ ++Q + K + + L ++ R + Q L T++
Sbjct: 374 KRVHQ-EEKRKVEEKRRELEEETNAFNRRKAAVEALQSQALHATSQ 418
>gi|13376725 coiled-coil domain containing 92 [Homo sapiens]
Length = 331
Score = 28.9 bits (63), Expect = 1.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 5 STKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRK---IKMLEYALKQK 61
+ KS +TG+ ++S+ C+ A L+ + + L K+L +K I +LE +K++
Sbjct: 67 TVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKER 126
Query: 62 RAKY 65
KY
Sbjct: 127 EKKY 130
>gi|93102405 hypothetical protein LOC84182 [Homo sapiens]
Length = 757
Score = 28.5 bits (62), Expect = 1.5
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 24/101 (23%)
Query: 39 DQENLKKDL-------VRKIKMLEYALKQKRAKYHKLK-------------YGRELNQGD 78
DQE + DL +RK+ LE+ K+ +AK + LK +G N
Sbjct: 31 DQERPRSDLSINNRNDLRKVLHLEFLYKENKAKENPLKTSLELITRYFLDHFGNTANNFT 90
Query: 79 MKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDS 119
PI L+ N K S ++T +V ++ ED+
Sbjct: 91 QDTPI----PALSVPKKNNKVPSRCSETTLVNIYDLSDEDA 127
>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 28.1 bits (61), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K ++ G K EN +L KI+ L + LK R +
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 28.1 bits (61), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K ++ G K EN +L KI+ L + LK R +
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 28.1 bits (61), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 34 QGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQG 77
+GERK +E +K R+ + E K+KR K K + GR +G
Sbjct: 87 KGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEG 130
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 28.1 bits (61), Expect = 1.9
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 12 TGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL--- 68
T + SA K KA + L +K L++DL + + ++ K+K K HK+
Sbjct: 340 TDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEFRAMDAVNKEKNTKEHKVIDA 399
Query: 69 KYGRELNQGDM-----KPPIYDSDSTLTKQPVN 96
K+ + +G+ K I S++ L+++ V+
Sbjct: 400 KFETKARKGEKPCALEKKDISKSEAKLSRKQVD 432
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 28.1 bits (61), Expect = 1.9
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 12 TGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL--- 68
T + SA K KA + L +K L++DL + + ++ K+K K HK+
Sbjct: 378 TDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEFRAMDAVNKEKNTKEHKVIDA 437
Query: 69 KYGRELNQGDM-----KPPIYDSDSTLTKQPVN 96
K+ + +G+ K I S++ L+++ V+
Sbjct: 438 KFETKARKGEKPCALEKKDISKSEAKLSRKQVD 470
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 28.1 bits (61), Expect = 1.9
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 27 KAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQGDMKPPIYDS 86
K +++ L+ + KD+++ + L + +L+ LKQ+ A + +L+ +E K I D
Sbjct: 367 KEEVSHLKSQNKDKDHQLEALGSRCSVLKEELKQEDA-HRELREAQEKELKLCKTQIQDM 425
Query: 87 DSTLTKQPVNVKTRSTTTQTKVV 109
+ + K + + R + T+ V+
Sbjct: 426 EKEMKK--LRAELRKSCTEQSVI 446
>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 27.7 bits (60), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K + G K +EN ++ KI+ L + LK R +
Sbjct: 341 WDVGKITPQ---KLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 27.7 bits (60), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K + G K +EN ++ KI+ L + LK R +
Sbjct: 341 WDVGKITPQ---KLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 27.3 bits (59), Expect = 3.2
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 13436 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 13492
Query: 67 KLKYG---RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 13493 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 13550
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 27.3 bits (59), Expect = 3.2
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 7131 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 7187
Query: 67 KLKYG---RELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 7188 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7245
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.123 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,371,774
Number of Sequences: 37866
Number of extensions: 150300
Number of successful extensions: 636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 581
Number of HSP's gapped (non-prelim): 93
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.