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Search of human proteins with 169203681
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169203681 PREDICTED: hypothetical protein [Homo sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169203681 PREDICTED: hypothetical protein [Homo sapiens] 372 e-104
gi|169202107 PREDICTED: hypothetical protein [Homo sapiens] 372 e-104
gi|169203191 PREDICTED: hypothetical protein [Homo sapiens] 333 6e-92
gi|110349719 titin isoform N2-A [Homo sapiens] 30 0.85
gi|110349717 titin isoform novex-2 [Homo sapiens] 30 0.85
gi|110349713 titin isoform novex-1 [Homo sapiens] 30 0.85
gi|110349715 titin isoform N2-B [Homo sapiens] 30 0.85
gi|110349721 titin isoform novex-3 [Homo sapiens] 29 1.9
gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 29 1.9
gi|215422375 neural precursor cell expressed, developmentally do... 29 2.5
gi|5453680 neural precursor cell expressed, developmentally down... 29 2.5
gi|58743365 ring finger protein 157 [Homo sapiens] 28 4.2
gi|6912460 GRB2-associated binding protein 2 isoform b [Homo sap... 28 5.5
gi|18105042 GRB2-associated binding protein 2 isoform a [Homo sa... 28 5.5
gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] 28 5.5
gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 28 5.5
gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 28 5.5
gi|66529407 tensin [Homo sapiens] 28 5.5
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 28 5.5
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 27 7.2
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi... 27 9.4
gi|7661990 mastermind-like 1 [Homo sapiens] 27 9.4
gi|126091130 Gab3 protein isoform 1 [Homo sapiens] 27 9.4
gi|18079323 Gab3 protein isoform 2 [Homo sapiens] 27 9.4
>gi|169203681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 372 bits (956), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG 60
MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG
Sbjct: 1 MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG 60
Query: 61 PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP 120
PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP
Sbjct: 61 PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP 120
Query: 121 TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 121 TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
>gi|169202107 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 372 bits (956), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG 60
MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG
Sbjct: 1 MVAVVGKEGERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALG 60
Query: 61 PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP 120
PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP
Sbjct: 61 PMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAP 120
Query: 121 TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 121 TLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
>gi|169203191 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 333 bits (853), Expect = 6e-92
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 22 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 81
MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR
Sbjct: 1 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 60
Query: 82 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 141
NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH
Sbjct: 61 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 120
Query: 142 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 121 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 158
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.4 bits (67), Expect = 0.85
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 101 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 158
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 15954 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 16013
Query: 159 RPSDLWEWLITGWSAHNSLSP 179
P L LIT + H S P
Sbjct: 16014 PPIKLKIGLITKNTVHLSWKP 16034
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 123 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1485 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1530
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.4 bits (67), Expect = 0.85
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 101 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 158
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9649 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9708
Query: 159 RPSDLWEWLITGWSAHNSLSP 179
P L LIT + H S P
Sbjct: 9709 PPIKLKIGLITKNTVHLSWKP 9729
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 123 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.4 bits (67), Expect = 0.85
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 101 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 158
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9582 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9641
Query: 159 RPSDLWEWLITGWSAHNSLSP 179
P L LIT + H S P
Sbjct: 9642 PPIKLKIGLITKNTVHLSWKP 9662
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 123 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.4 bits (67), Expect = 0.85
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 101 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 158
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9457 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9516
Query: 159 RPSDLWEWLITGWSAHNSLSP 179
P L LIT + H S P
Sbjct: 9517 PPIKLKIGLITKNTVHLSWKP 9537
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 123 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 123 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1485 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1530
>gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
Length = 525
Score = 29.3 bits (64), Expect = 1.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 129 LFRVSESLGELTHPGTEEDEAAERSLVPPERPS 161
L ++ + +GE +HP ++ S VPP RPS
Sbjct: 375 LKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPS 407
>gi|215422375 neural precursor cell expressed, developmentally
down-regulated 9 isoform 3 [Homo sapiens]
Length = 834
Score = 28.9 bits (63), Expect = 2.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 109 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVP 156
GP S HL++ +++ + T + S G+L HPG + +A ++L P
Sbjct: 560 GPGSLHLKNGPESIM--NSTEYPHGGSQGQLLHPGDHKAQAHNKALPP 605
>gi|5453680 neural precursor cell expressed, developmentally
down-regulated 9 isoform 1 [Homo sapiens]
Length = 834
Score = 28.9 bits (63), Expect = 2.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 109 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVP 156
GP S HL++ +++ + T + S G+L HPG + +A ++L P
Sbjct: 560 GPGSLHLKNGPESIM--NSTEYPHGGSQGQLLHPGDHKAQAHNKALPP 605
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 28.1 bits (61), Expect = 4.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 109 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPER-PSDLWEWL 167
GP S+ L + ++ + VS G PGTEE+ A S P R PS+ E L
Sbjct: 509 GPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGL 568
>gi|6912460 GRB2-associated binding protein 2 isoform b [Homo
sapiens]
Length = 638
Score = 27.7 bits (60), Expect = 5.5
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFT 106
+T L+N S A GP S S Q L P H + +FT
Sbjct: 86 STDSLRNVSSAGHGPRSS---PAELSSSSQHLLRERKSSAPSHSS---------QPTLFT 133
Query: 107 FLGPDSAHLRSTAPTLLPESF 127
F P S H++ T T P+ +
Sbjct: 134 FEPPVSNHMQPTLSTSAPQEY 154
>gi|18105042 GRB2-associated binding protein 2 isoform a [Homo
sapiens]
Length = 676
Score = 27.7 bits (60), Expect = 5.5
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFT 106
+T L+N S A GP S S Q L P H + +FT
Sbjct: 124 STDSLRNVSSAGHGPRSS---PAELSSSSQHLLRERKSSAPSHSS---------QPTLFT 171
Query: 107 FLGPDSAHLRSTAPTLLPESF 127
F P S H++ T T P+ +
Sbjct: 172 FEPPVSNHMQPTLSTSAPQEY 192
>gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]
Length = 163
Score = 27.7 bits (60), Expect = 5.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 27.7 bits (60), Expect = 5.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 27.7 bits (60), Expect = 5.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 27.7 bits (60), Expect = 5.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 23 PWSSRDPLKENEEIQKQWPPAKRMATQPLQNHS 55
P S+ PL +++ + WP A +++QPL S
Sbjct: 721 PASAAAPLHKSQSVPGAWPGASPLSSQPLSGSS 753
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 27.7 bits (60), Expect = 5.5
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 133 SESLGELTHP-GTEEDEAAER----SLVPPE-------RPSDLWEWLITGWSAHNSLSP 179
S G T P +EED +R SL PP+ RP D W+W T S N+ P
Sbjct: 605 SSGPGMSTPPFSSEEDSEGDRVQRVSLQPPKVPSRMVPRPKDDWDWSDTETSEENAQPP 663
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 27.3 bits (59), Expect = 7.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 10 ERRDAAVRVNQPMPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTL 69
+ + V ++QP W S P+ + E K P PL + A P G LT+
Sbjct: 210 DEQKTEVLLDQPEIWGSGQPINPSMESPKLTRPFPTGTPPPLPPKNVPATPPRTGSPLTI 269
Query: 70 G 70
G
Sbjct: 270 G 270
>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
sapiens]
Length = 562
Score = 26.9 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 83 TLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESL 136
+ P+PD G +I G+ F F GP L+ + + P L R E L
Sbjct: 310 SFPIPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGL 363
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 26.9 bits (58), Expect = 9.4
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 55 SGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAH 114
SG+A L + + SP F + L P AG G TFLGP SA
Sbjct: 284 SGSATQTPLAQDINIKTEFSPAA-FEQEQLGSPQVRAGSAGQ---------TFLGPSSAP 333
Query: 115 LRSTAPTLLPESFTLFRVS-----ESLGELTHPGTEEDEAAERSLVPPERPS 161
+ + +P+ L S TLF S ++ P + + + A+R+L PS
Sbjct: 334 VSTDSPS-LGGSQTLFHTSGQPRADNPSPNLMPASAQAQNAQRALAGVVLPS 384
>gi|126091130 Gab3 protein isoform 1 [Homo sapiens]
Length = 587
Score = 26.9 bits (58), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 109 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
GP HL S++P L + +V ++ G L E D + P +PS L E
Sbjct: 265 GPPRDHL-SSSPLLESSLSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQ 323
Query: 169 TGWSAHN 175
WS H+
Sbjct: 324 EEWSTHS 330
>gi|18079323 Gab3 protein isoform 2 [Homo sapiens]
Length = 586
Score = 26.9 bits (58), Expect = 9.4
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 109 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 168
GP HL S++P L + +V ++ G L E D + P +PS L E
Sbjct: 264 GPPRDHL-SSSPLLESSLSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQ 322
Query: 169 TGWSAHN 175
WS H+
Sbjct: 323 EEWSTHS 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,127,089
Number of Sequences: 37866
Number of extensions: 384826
Number of successful extensions: 1015
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 32
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.