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Search of human proteins with 169194755
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169194755 PREDICTED: hypothetical protein [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169194755 PREDICTED: hypothetical protein [Homo sapiens] 507 e-144
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 42 4e-04
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 42 4e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens] 42 4e-04
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 41 8e-04
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 41 0.001
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 41 0.001
gi|145386517 phostensin [Homo sapiens] 40 0.002
gi|199559805 phostensin [Homo sapiens] 40 0.002
gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens] 39 0.004
gi|71979667 growth factor receptor-bound protein 7 [Homo sapiens] 39 0.004
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.004
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 39 0.005
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 38 0.007
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 38 0.007
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.007
gi|226498192 atonal homolog 8 [Homo sapiens] 38 0.009
gi|157743252 pecanex-like 3 [Homo sapiens] 38 0.009
gi|210032580 SET domain containing 1B [Homo sapiens] 38 0.009
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 38 0.009
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 38 0.009
gi|157168329 formin 1 [Homo sapiens] 37 0.012
gi|239753353 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo ... 37 0.012
>gi|169194755 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 507 bits (1305), Expect = e-144
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MTIMTDQTMATGILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQ 60
MTIMTDQTMATGILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQ
Sbjct: 1 MTIMTDQTMATGILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQ 60
Query: 61 RIPAPPPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEE 120
RIPAPPPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEE
Sbjct: 61 RIPAPPPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEE 120
Query: 121 RKEEIQACDPDPTRGAQTPALGTPGERLLRQSSVQHQPALSPSFCSFAAVLTETLRYHCQ 180
RKEEIQACDPDPTRGAQTPALGTPGERLLRQSSVQHQPALSPSFCSFAAVLTETLRYHCQ
Sbjct: 121 RKEEIQACDPDPTRGAQTPALGTPGERLLRQSSVQHQPALSPSFCSFAAVLTETLRYHCQ 180
Query: 181 GSFAESSTIKAARKTDLHRNLGGPAAWGGPCVKKEGLKVATQGQGSPQDGGRCGTDNRYG 240
GSFAESSTIKAARKTDLHRNLGGPAAWGGPCVKKEGLKVATQGQGSPQDGGRCGTDNRYG
Sbjct: 181 GSFAESSTIKAARKTDLHRNLGGPAAWGGPCVKKEGLKVATQGQGSPQDGGRCGTDNRYG 240
Query: 241 PVG 243
PVG
Sbjct: 241 PVG 243
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 42.4 bits (98), Expect = 4e-04
Identities = 42/137 (30%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 19 TGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP-----------APPP 67
T SE P+ P P RP R APS+ G + + QP +P PPP
Sbjct: 1094 TISEGPV---PSLPIRPSR-APSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1149
Query: 68 GAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQL-----LGEERK 122
P P TR P QRP SG P + G P V R ++ G RK
Sbjct: 1150 PRPVAPPTRPAP-PQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRK 1208
Query: 123 EEIQACDPDPTRGAQTP 139
+ I P P G P
Sbjct: 1209 DNIGRSQPSPQAGLAGP 1225
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 42.4 bits (98), Expect = 4e-04
Identities = 42/137 (30%), Positives = 51/137 (37%), Gaps = 21/137 (15%)
Query: 19 TGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP-----------APPP 67
T SE P+ P P RP R APS+ G + + QP +P PPP
Sbjct: 1094 TISEGPV---PSLPIRPSR-APSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1149
Query: 68 GAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQL-----LGEERK 122
P P TR P QRP SG P + G P V R ++ G RK
Sbjct: 1150 PRPVAPPTRPAP-PQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRK 1208
Query: 123 EEIQACDPDPTRGAQTP 139
+ I P P G P
Sbjct: 1209 DNIGRSQPSPQAGLAGP 1225
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 42.4 bits (98), Expect = 4e-04
Identities = 30/73 (41%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 16 PVMTGSEAPL--FLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAP-PPGAPPP 72
P M G PL LPPG P P G P G GL P P R+P P PPG PPP
Sbjct: 445 PGMPGLRGPLPRLLPPGPPPGRPPGPPP--GPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502
Query: 73 PATRTFPTAQRPL 85
P PL
Sbjct: 503 RPGMMRPPLVPPL 515
Score = 36.2 bits (82), Expect = 0.027
Identities = 28/78 (35%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 24 PLFLPPGDP-ARPPRGAPSQFGGRDGLRPRDLSL-----QPQQRIPAPPPGAPPPPATRT 77
P LPPG P PP P G G PR L +P P PPPG PP P R
Sbjct: 427 PTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRG 486
Query: 78 FPTAQRPLVLSGLEQRYP 95
P P G+ P
Sbjct: 487 PPPRLPPPAPPGIPPPRP 504
Score = 34.7 bits (78), Expect = 0.077
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
Query: 6 DQTMATGILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAP 65
+++ + G T P +PP PP P G P R P P
Sbjct: 376 EESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPA---------PPLRPPGP 426
Query: 66 PPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSP 103
P G PP P P RP + GL P+ + G P
Sbjct: 427 PTGLPPGPPPGA-PPFLRPPGMPGLRGPLPRLLPPGPP 463
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 18 MTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRT 77
+ G++ P L PP A S PR L P ++ P PPPG PPP +
Sbjct: 158 LPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPR---LPPGRKPPGPPPGPPPPQVVQM 214
Query: 78 F 78
+
Sbjct: 215 Y 215
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 41.2 bits (95), Expect = 8e-04
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 30/152 (19%)
Query: 16 PVMTGSEAPLFLPP-------GDPARPPRGAPSQFGGRDGLRPRDLS---LQPQQRIPAP 65
PV+ + P F PP P PP P F R G P L L P P
Sbjct: 690 PVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFL-RPGFNPMHLPPGFLPPGPPPPIT 748
Query: 66 PPGAPPPPATRTFPTAQRPLVLSGLE---------QRYPQTVQKGSPCCLPMQTVGR-LQ 115
PP + PPP T P P ++SG + Y V +P LP V + +
Sbjct: 749 PPVSIPPPHT---PPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVS 805
Query: 116 LLGEERKEEIQACDPDPTRGAQTPALGTPGER 147
LLG Q P P G Q P+ G G R
Sbjct: 806 LLGT------QGVAPGPVIGLQAPSTGLLGAR 831
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/87 (34%), Positives = 34/87 (39%), Gaps = 16/87 (18%)
Query: 12 GILTPVMTGSEAPLFLPPGDPARPPRGAPSQFG---GRDGLRPRDLSLQP-QQRIPAPPP 67
G P G + P PP P P G P G G G RD QP QQ P P
Sbjct: 874 GFAMPPPHGMKGPF--PPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQP 931
Query: 68 GAP----------PPPATRTFPTAQRP 84
AP PPP+ + PT Q+P
Sbjct: 932 QAPQQPQQQQQQQPPPSQQPPPTQQQP 958
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 40.8 bits (94), Expect = 0.001
Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 27/132 (20%)
Query: 19 TGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP-----------APPP 67
T SE P+ P P RP R APS+ G + + QP +P PPP
Sbjct: 1055 TISEGPV---PSLPIRPSR-APSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP 1110
Query: 68 GAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQA 127
P P TR P QRP SG P + G+P + G RK+ I
Sbjct: 1111 PRPVAPPTRPAP-PQRPPPPSGARSPAPTRKEFGAP-----------KSPGTTRKDNIGR 1158
Query: 128 CDPDPTRGAQTP 139
P P G P
Sbjct: 1159 SQPSPQAGLAGP 1170
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 40.8 bits (94), Expect = 0.001
Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 14 LTPVMTGSEAPL--FLPPGDPARPPRGAPSQFGGRDGLRPRDL----SLQPQQRIPAPPP 67
L P+ G P+ + PP P P +G P G P L +L P +P PPP
Sbjct: 289 LGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
Query: 68 GAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGR 113
GA PPPA P P SG+ P + +G P P GR
Sbjct: 349 GA-PPPAPHVNPAFFPPPTNSGM----PTSDSRGPP---PTDPYGR 386
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 24 PLFLPP--GDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPP 72
PL PP GD PP P Q G+ L P P PPPG PPP
Sbjct: 262 PLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
Score = 27.7 bits (60), Expect = 9.4
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 16 PVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPP 73
P G P F P RPP G P G G P L P P PPPP
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGP-PGPPGPPPPGQVLPPPLAGPPNRGDRPPPP 276
>gi|145386517 phostensin [Homo sapiens]
Length = 613
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 29/110 (26%)
Query: 14 LTPVMTGSEAPLFLPPGDP----------ARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP 63
L+P AP PPGDP A P GAP + G ++ P++ +P
Sbjct: 431 LSPPPPAPTAPQ--PPGDPLMSRLFYGVKAGPGVGAPRRSG-------HTFTVNPRRSVP 481
Query: 64 APPPGAPPPPAT----------RTFPTAQRPLVLSGLEQRYPQTVQKGSP 103
P P PAT + +PTA+ LVL G + + KGSP
Sbjct: 482 PATPATPTSPATVDAAVPGAGKKRYPTAEEILVLGGYLRLSRSCLAKGSP 531
Score = 32.7 bits (73), Expect = 0.29
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 36 PRGAPSQFGGRDGLRPRD---LSLQPQQRIPAPPPGAPPPPATRTFPTAQRP 84
P P + G GLR ++ + LQP P P P +PPPPA PTA +P
Sbjct: 400 PSPLPPEDAGTGGLRQQEEEAVELQP----PPPAPLSPPPPA----PTAPQP 443
>gi|199559805 phostensin [Homo sapiens]
Length = 613
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 29/110 (26%)
Query: 14 LTPVMTGSEAPLFLPPGDP----------ARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP 63
L+P AP PPGDP A P GAP + G ++ P++ +P
Sbjct: 431 LSPPPPAPTAPQ--PPGDPLMSRLFYGVKAGPGVGAPRRSG-------HTFTVNPRRSVP 481
Query: 64 APPPGAPPPPAT----------RTFPTAQRPLVLSGLEQRYPQTVQKGSP 103
P P PAT + +PTA+ LVL G + + KGSP
Sbjct: 482 PATPATPTSPATVDAAVPGAGKKRYPTAEEILVLGGYLRLSRSCLAKGSP 531
Score = 32.7 bits (73), Expect = 0.29
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 36 PRGAPSQFGGRDGLRPRD---LSLQPQQRIPAPPPGAPPPPATRTFPTAQRP 84
P P + G GLR ++ + LQP P P P +PPPPA PTA +P
Sbjct: 400 PSPLPPEDAGTGGLRQQEEEAVELQP----PPPAPLSPPPPA----PTAPQP 443
>gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens]
Length = 532
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 27/103 (26%)
Query: 49 LRPRDLSLQPQQRIPAP--PPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCL 106
L P LS P+ PAP PPG P PP T PL P+ V++ P +
Sbjct: 5 LSPPHLSSSPEDLCPAPGTPPGTPRPPDT--------PL---------PEEVKRSQPLLI 47
Query: 107 PMQTVGRLQLLGEERKEEIQACDPDP-----TRGAQTPALGTP 144
P T GR +L EER+ P+P + +Q+P LG P
Sbjct: 48 P--TTGR-KLREEERRATSLPSIPNPFPELCSPPSQSPILGGP 87
>gi|71979667 growth factor receptor-bound protein 7 [Homo sapiens]
Length = 532
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 27/103 (26%)
Query: 49 LRPRDLSLQPQQRIPAP--PPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCL 106
L P LS P+ PAP PPG P PP T PL P+ V++ P +
Sbjct: 5 LSPPHLSSSPEDLCPAPGTPPGTPRPPDT--------PL---------PEEVKRSQPLLI 47
Query: 107 PMQTVGRLQLLGEERKEEIQACDPDP-----TRGAQTPALGTP 144
P T GR +L EER+ P+P + +Q+P LG P
Sbjct: 48 P--TTGR-KLREEERRATSLPSIPNPFPELCSPPSQSPILGGP 87
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/147 (25%), Positives = 49/147 (33%), Gaps = 12/147 (8%)
Query: 28 PPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPG--APPPPATRTFPTAQRPL 85
P G P P PS GG P+ P P+P G P P T P A P
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1204
Query: 86 VLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQACDP---------DPTRGA 136
GL P+ +P P G L + A P P +GA
Sbjct: 1205 PKGGLATPSPKGAPT-TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGA 1263
Query: 137 QTPALGTPGERLLRQSSVQHQPALSPS 163
TP TP ++ H+ A +P+
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKGAPNPA 1290
Score = 37.7 bits (86), Expect = 0.009
Identities = 37/139 (26%), Positives = 46/139 (33%), Gaps = 5/139 (3%)
Query: 28 PPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPG--APPPPATRTFPTAQRPL 85
P G P P PS GG P+ P P+P G P P T P A P
Sbjct: 1168 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1227
Query: 86 VLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQACDPDPTRG--AQTPALGT 143
GL P+ +P P G + A P +G A P G
Sbjct: 1228 PKGGLATPSPKGAPT-TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGA 1286
Query: 144 PGERLLRQSSVQHQPALSP 162
P ++ S + PA SP
Sbjct: 1287 PNPAVVTPPSPKGGPATSP 1305
Score = 33.9 bits (76), Expect = 0.13
Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 16/118 (13%)
Query: 5 TDQTMATGILTPVMTGSEAPLFLPPGDP-----ARPPRGAPSQFG-------GRDGLRPR 52
T ++ G+ TP G+ P + P P PP+GAP+ G G P
Sbjct: 1270 TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329
Query: 53 DLSLQPQQRIPAPPPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTV---QKGSPCCLP 107
+ P P P G P PAT T + P S E P KG P P
Sbjct: 1330 KGAPTPPAVTPPSPKGTPTLPAT-TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTP 1386
Score = 32.0 bits (71), Expect = 0.50
Identities = 31/114 (27%), Positives = 38/114 (33%), Gaps = 4/114 (3%)
Query: 30 GDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPG--APPPPATRTFPTAQRPLVL 87
G P P PS GG P+ + P P+P G PP T P A P
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 88 SGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQAC-DPDPTRGAQTPA 140
GL P+ +P P G L + A P P G TP+
Sbjct: 1138 GGLATPPPKGAPT-TPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPS 1190
Score = 31.6 bits (70), Expect = 0.65
Identities = 34/116 (29%), Positives = 37/116 (31%), Gaps = 13/116 (11%)
Query: 4 MTDQTMATGILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP 63
MT + TP G A P G P P PS GG P+ P P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPS-PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 64 AP--------PPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTV----QKGSPCCLP 107
+P P GAP PPA P S P V KGSP P
Sbjct: 972 SPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP 1027
Score = 31.2 bits (69), Expect = 0.85
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 17 VMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATR 76
+ T EAP + + PP PS + G P++L + P P+P PP T
Sbjct: 1564 IPTPKEAPATPSSKEASSPPAVTPSTYKGAPS--PKELLIPPAVTSPSPKEAPTPPAVTP 1621
Query: 77 TFP 79
P
Sbjct: 1622 PSP 1624
Score = 27.7 bits (60), Expect = 9.4
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAP---PPPATRTFPT 80
P PP PP P G P + P P P G P PP T P
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPA 1314
Query: 81 AQRP 84
A P
Sbjct: 1315 ATPP 1318
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 22/147 (14%)
Query: 32 PARPPR-------GAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAP----PPPATRTFPT 80
PA PR GAP++ G G R R + + A P G P P+ P
Sbjct: 74 PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPR 133
Query: 81 AQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQAC-----DPDPTRG 135
++ P RYP+ V + +P P T R + R A + P RG
Sbjct: 134 SRHP------HTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRG 187
Query: 136 AQTPALGTPGERLLRQSSVQHQPALSP 162
P PG+ R +++ P+LSP
Sbjct: 188 DPRPRAPRPGDHPRRSPALRETPSLSP 214
Score = 27.7 bits (60), Expect = 9.4
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP---APPPGAPPPPATR 76
P +P P RPP G + R G R + R P PP G P P A R
Sbjct: 142 PRAVPEATPLRPPPGTRPRAKSRPGC--RSSPFPARSRTPGEAGPPRGDPRPRAPR 195
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 38.5 bits (88), Expect = 0.005
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 24 PLFLPPGDPARPPRGAPS---QFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPT 80
P + G A+P PS QFG L+ QPQQ++P PPP P PP P
Sbjct: 416 PQDVQQGAHAQPTLQTPSIQVQFGHHQKLKLSHFQQQPQQQLPPPPPPLPHPPPPLPPPP 475
Query: 81 AQ 82
Q
Sbjct: 476 QQ 477
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQR 83
P +PPG P +PP G P + + PQ+ IP P P P PA P A
Sbjct: 265 PSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP-PQPTGRPSPAPPAVPPAAS 323
Query: 84 PLVLSGLEQRYPQTVQKGSP 103
P++ PQT G P
Sbjct: 324 PVM-------PPQTQSPGQP 336
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.007
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 23 APLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQ 82
APL PP PA PP AP G R P + +P P PPP PP P + P
Sbjct: 175 APLAAPPPAPAAPPAVAPPA-GPRRAPPPAVAAREP----PLPPPPQPPAPPQQQQPPPP 229
Query: 83 RP 84
+P
Sbjct: 230 QP 231
Score = 28.5 bits (62), Expect = 5.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 15/46 (32%)
Query: 29 PGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPA 74
P P R PRGAP+ P P P PPPPA
Sbjct: 108 PPAPPRAPRGAPAAAAAA---------------APPPTPAPPPPPA 138
Score = 28.1 bits (61), Expect = 7.2
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 28 PPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQRP 84
PP PA PP AP R + P+P P P P A R P A P
Sbjct: 127 PPPTPAPPPPPAP--VAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP 181
Score = 28.1 bits (61), Expect = 7.2
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 32 PARPPRGAPSQFGGRDGLRPRDLSLQPQQRIP--APPPG--APPPPATRTFPTAQRPLVL 87
PAR PR A + P + Q+ P APPP APP A P P +
Sbjct: 145 PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAV 204
Query: 88 SGLEQRYPQTVQKGSP 103
+ E P Q +P
Sbjct: 205 AAREPPLPPPPQPPAP 220
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 37.7 bits (86), Expect = 0.009
Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 60/203 (29%)
Query: 14 LTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQ---------RIPA 64
L PV P+ P PA PPRG G R G R ++S ++ +P
Sbjct: 67 LQPVPVPVPVPV---PVAPAVPPRGGTDTAGERGGSRAPEVSDARKRCFALGAVGPGLPT 123
Query: 65 PPPGAPPPPATRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEE 124
PPP PPPPA PQ+ G P P + G +
Sbjct: 124 PPP--PPPPA--------------------PQSQAPGGPEAQPFREPG--------LRPR 153
Query: 125 IQACDPDPTRGAQT--PALGTPGERLLRQSSVQHQPALSPSFCSFAAVLTETLRYHCQGS 182
I C P P R A + PA P E S+V+ P P S++++ H S
Sbjct: 154 ILLCAP-PARPAPSAPPAPPAPPE-----STVRPAPPTRPGESSYSSISHVIYNNHQDSS 207
Query: 183 ----------FAESSTIKAARKT 195
A SS IKA ++T
Sbjct: 208 ASPRKRPGEATAASSEIKALQQT 230
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 37.7 bits (86), Expect = 0.009
Identities = 49/173 (28%), Positives = 64/173 (36%), Gaps = 27/173 (15%)
Query: 15 TPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPA 74
TP T LPPG P PR + S G DG RP L P R+P PPP +P P
Sbjct: 1859 TPENTAGNGDQPLPPG-PGWGPRSSLS--GSGDG-RPPPLLQWPPPRLPGPPPASPIPTE 1914
Query: 75 TRTFPTAQRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQACDPDPTR 134
P RP L P G+ L G ++ + D +P
Sbjct: 1915 G---PRTSRPPGPGLLSSEGPS---------------GKWSLGG---RKGLGGSDGEPAS 1953
Query: 135 GAQTPALGTPGERLLRQSSVQHQPALSPSFCSFAAVLTETLRYHCQGSFAESS 187
G +P GTP + S+ +LSP + A+ + C S A S
Sbjct: 1954 G--SPKGGTPKSQAPLDLSLSLSLSLSPDVSTEASPPRASQDIPCLDSSAPES 2004
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 37.7 bits (86), Expect = 0.009
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 13 ILTPVMTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPP 72
++TP AP L P P PP G P L P PQ P PPP PPP
Sbjct: 661 VVTPGAAAVAAPSVLAPTLPLPPPPGFPP-------LPPPPPPPPPQPGFPMPPPLPPPP 713
Query: 73 P 73
P
Sbjct: 714 P 714
Score = 31.2 bits (69), Expect = 0.85
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 10 ATGILTPVMTGSEAPLF--LPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPP- 66
A +L P + P F LPP P PP+ P P +P PP
Sbjct: 671 APSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPL 730
Query: 67 ---PGAPPPPATRTFP 79
PG PPPP P
Sbjct: 731 PAPPGVPPPPILPPLP 746
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 14/65 (21%)
Query: 28 PPGDPARPPRGAPSQFGGRDG----LRPRDLSLQPQQRI----PAPPPGAPPPPATRTFP 79
PP +P A + FG RD P L P + + P PPG PPPP T +
Sbjct: 410 PPEEPT-----ATAAFGARDSGEFRRAPAPPPLPPAEPLAKEKPGTPPG-PPPPDTNSME 463
Query: 80 TAQRP 84
RP
Sbjct: 464 LGGRP 468
Score = 28.9 bits (63), Expect = 4.2
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 25 LFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQR-IPAPPPGAP--PPPATRTFPTA 81
L L PG P P PS PR ++L + IPAPPP P PPP P
Sbjct: 1506 LLLLPGQPQTPV--FPSTHD------PRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVE 1557
Query: 82 QRPLVLSGLEQRYP 95
L L+ ++P
Sbjct: 1558 PTKLPFKELDNQWP 1571
Score = 28.1 bits (61), Expect = 7.2
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 14 LTPVMTGSEAPLFLPPGDPARPPRG------APSQFGGRDGLRPRDLSLQPQQRIPAPPP 67
L P T S+ P F P P+ P +P+ D DL L P+ P P P
Sbjct: 543 LAPFGTNSQ-PGFRGPTPPSSRPSSTGLEDISPTPLPDSDEDEELDLGLGPR---PPPEP 598
Query: 68 GAPPPPATRTFPTAQRPLVLSG 89
G PP PA TA+ L L G
Sbjct: 599 G-PPDPAGLLSQTAEVALDLVG 619
Score = 27.7 bits (60), Expect = 9.4
Identities = 42/172 (24%), Positives = 57/172 (33%), Gaps = 14/172 (8%)
Query: 22 EAPLFLPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTA 81
E + L P PA+ P R DL ++P+ + P P PP P R
Sbjct: 1234 EGAMLLSPEPPAKEVEARPPLSPER--APEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPP 1291
Query: 82 QRPLVLSGLEQRYPQTVQKGSPCCLPMQTVGRLQLLGEERKEEIQACDPDPTRGAQTPAL 141
P + +P + P T G L + + E P G + P
Sbjct: 1292 SPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATP----GGEPPLS 1347
Query: 142 GTPGERLLRQSSVQ------HQPALSPSFCSFAAVLTETLRYHCQGSFAESS 187
G G L SS Q PA SPS S T + +F+E S
Sbjct: 1348 G--GSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTPTFSEPS 1397
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 37.7 bits (86), Expect = 0.009
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 36 PRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQRPLVLSGLEQRYP 95
P G+P +LQ Q PP APP PA P + P ++ L Q+ P
Sbjct: 805 PSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPA----PASSAPGHVAKLPQKEP 860
Query: 96 QTVQKGSPCCLPMQTVGRLQLLGEERKEEIQACDPDPTRGAQTPALG--TPGERLLRQSS 153
KG P + VG L+ + ++ GA TPALG P + L R S
Sbjct: 861 VGCSKGGG--PPREDVG-APLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALS 917
Query: 154 VQHQPALSPSFCSFAAV 170
+ P +PS AAV
Sbjct: 918 GRASPVPAPSSGLHAAV 934
Score = 28.1 bits (61), Expect = 7.2
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 16/81 (19%)
Query: 58 PQQRIPAPPPGAP------PPPATRTFPTAQRPLV---LSGLEQRYPQTVQKGSPCCLPM 108
P++ APPP A PPPA+ ++P A+ PL +GL +T ++ +
Sbjct: 1015 PKKSPKAPPPVARKPSVGVPPPASPSYPRAE-PLTAPPTNGLPHTQDRTKRELA------ 1067
Query: 109 QTVGRLQLLGEERKEEIQACD 129
+ G LQL+G E K + D
Sbjct: 1068 ENGGVLQLVGPEEKMGLPGSD 1088
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.7 bits (86), Expect = 0.009
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 24 PLFLPPGDPARPPRGAPSQFGGRD-GLRP-----------RDLSLQPQQ-RIPAPPPGAP 70
P FLP G+P R RG + GGRD G RP RD P+Q +P P G P
Sbjct: 1331 PGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPSTLRRPAYRDNQWNPRQSEVPKPEDGEP 1390
Query: 71 PPPATRTFPTA 81
P + P A
Sbjct: 1391 PRRHEQFIPIA 1401
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 37.4 bits (85), Expect = 0.012
Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 27 LPPGDPARPPRGAPSQFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRTFPTAQRPLV 86
LPP P PP PS G P L P P PP APPPP P P +
Sbjct: 680 LPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP---PGL 736
Query: 87 LSGLEQRYPQTVQKGS--PCCLPMQ 109
GL Q +K + P C PM+
Sbjct: 737 FFGLGSSSSQCPRKPAIEPSC-PMK 760
Score = 29.6 bits (65), Expect = 2.5
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 18 MTGSEAPLFLPPGDPARPPRGAPSQFGGRDGLRPRD-LSLQPQQRIPAPPPGAPPPPATR 76
M ++ PP PP PS G P +S P P PPP PPP++
Sbjct: 637 MASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSA 696
Query: 77 TFPTAQRP 84
P P
Sbjct: 697 GPPPPPPP 704
>gi|239753353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 448
Score = 37.4 bits (85), Expect = 0.012
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 34 RPPRGAPS--------QFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRT-FPTAQRP 84
R RGAP+ + G G++ R LQP+ P PP PPPPA R P +Q
Sbjct: 141 RAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCGTPKSQEA 200
Query: 85 LVLSGLEQRYPQTVQKGSPCC 105
+G E + + + G CC
Sbjct: 201 GAETGGEAQGGEALAPG--CC 219
>gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo
sapiens]
Length = 448
Score = 37.4 bits (85), Expect = 0.012
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 34 RPPRGAPS--------QFGGRDGLRPRDLSLQPQQRIPAPPPGAPPPPATRT-FPTAQRP 84
R RGAP+ + G G++ R LQP+ P PP PPPPA R P +Q
Sbjct: 141 RAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCGTPKSQEA 200
Query: 85 LVLSGLEQRYPQTVQKGSPCC 105
+G E + + + G CC
Sbjct: 201 GAETGGEAQGGEALAPG--CC 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,279,977
Number of Sequences: 37866
Number of extensions: 899225
Number of successful extensions: 11388
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 620
Number of HSP's that attempted gapping in prelim test: 7324
Number of HSP's gapped (non-prelim): 3324
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.