Guide to the Human Genome
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Search of human proteins with 169184221

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169184221 PREDICTED: family with sequence similarity 27,
member E3 [Homo sapiens]
         (113 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169184221 PREDICTED: family with sequence similarity 27, memb...   240   2e-64
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     237   2e-63
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     190   2e-49
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     189   5e-49
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ...   189   5e-49
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ...   189   5e-49
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     189   5e-49
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     186   5e-48
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     186   5e-48
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     186   5e-48
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     182   5e-47
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ...   181   8e-47
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ...   179   3e-46
gi|239752497 PREDICTED: similar to family with sequence similari...   178   9e-46
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ...   176   3e-45
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     173   2e-44
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ...   173   2e-44
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ...   173   2e-44
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     156   3e-39
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ...    58   2e-09
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]            44   4e-05
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    42   1e-04
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]            39   9e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti...    38   0.002
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]            37   0.004
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    35   0.013
gi|153945755 zinc finger protein 608 [Homo sapiens]                    33   0.064
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]            32   0.083
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun...    32   0.11 
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun...    32   0.11 

>gi|169184221 PREDICTED: family with sequence similarity 27, member
           E3 [Homo sapiens]
          Length = 113

 Score =  240 bits (612), Expect = 2e-64
 Identities = 113/113 (100%), Positives = 113/113 (100%)

Query: 1   MGIFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC 60
           MGIFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC
Sbjct: 1   MGIFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC 60

Query: 61  TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL
Sbjct: 61  TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113


>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 113

 Score =  237 bits (604), Expect = 2e-63
 Identities = 112/113 (99%), Positives = 112/113 (99%)

Query: 1   MGIFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC 60
           MGIFQLLRDRRISSRGPGLHTPKAE RRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC
Sbjct: 1   MGIFQLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWC 60

Query: 61  TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL
Sbjct: 61  TGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113


>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score =  190 bits (482), Expect = 2e-49
 Identities = 89/108 (82%), Positives = 95/108 (87%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLR+RRISSRGPG   PKA+P RRK LT GLMTQ E QK+AHQRQAAMR+TALW TGH
Sbjct: 5   FQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
           IRP+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT+TH HT R
Sbjct: 65  IRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQR 112


>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 131

 Score =  189 bits (479), Expect = 5e-49
 Identities = 89/107 (83%), Positives = 94/107 (87%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLRDRRISSRGPG H  KA+P RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 5   FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T  HTH
Sbjct: 65  IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111


>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
           sapiens]
          Length = 131

 Score =  189 bits (479), Expect = 5e-49
 Identities = 89/107 (83%), Positives = 94/107 (87%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLRDRRISSRGPG H  KA+P RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 5   FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T  HTH
Sbjct: 65  IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111


>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
           sapiens]
          Length = 174

 Score =  189 bits (479), Expect = 5e-49
 Identities = 89/107 (83%), Positives = 94/107 (87%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLRDRRISSRGPG H  KA+P RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 5   FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T  HTH
Sbjct: 65  IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111


>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 174

 Score =  189 bits (479), Expect = 5e-49
 Identities = 89/107 (83%), Positives = 94/107 (87%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLRDRRISSRGPG H  KA+P RRK LTTGLMTQAE QK+AHQRQAAM ET LWCTGH
Sbjct: 5   FQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLWCTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           IRP+THTH GTH QT R+RERNTQRLRDRERRENGRHTHT+T  HTH
Sbjct: 65  IRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTH 111


>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  186 bits (471), Expect = 5e-48
 Identities = 89/107 (83%), Positives = 93/107 (86%)

Query: 3   IFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTG 62
           I QLLRDRR+SSRGPGLH PK EPR+RK LT G  TQAE QK AHQRQAAMRE AL CTG
Sbjct: 4   IVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTG 63

Query: 63  HIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHT 109
           HIRP+TH HTGTHTQTDRERERNTQRLRDRERRENGRHT TYT+ HT
Sbjct: 64  HIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHT 110


>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  186 bits (471), Expect = 5e-48
 Identities = 89/107 (83%), Positives = 93/107 (86%)

Query: 3   IFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTG 62
           I QLLRDRR+SSRGPGLH PK EPR+RK LT G  TQAE QK AHQRQAAMRE AL CTG
Sbjct: 4   IVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTG 63

Query: 63  HIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHT 109
           HIRP+TH HTGTHTQTDRERERNTQRLRDRERRENGRHT TYT+ HT
Sbjct: 64  HIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHT 110


>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  186 bits (471), Expect = 5e-48
 Identities = 89/107 (83%), Positives = 93/107 (86%)

Query: 3   IFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTG 62
           I QLLRDRR+SSRGPGLH PK EPR+RK LT G  TQAE QK AHQRQAAMRE AL CTG
Sbjct: 4   IVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTG 63

Query: 63  HIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHT 109
           HIRP+TH HTGTHTQTDRERERNTQRLRDRERRENGRHT TYT+ HT
Sbjct: 64  HIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHT 110


>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score =  182 bits (462), Expect = 5e-47
 Identities = 86/108 (79%), Positives = 92/108 (85%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLR+RRISSRGPG   PKA+P RRK LT GLMTQ E QK+AHQRQAAMR+TALW TGH
Sbjct: 5   FQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALWRTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
           IRP+THTHTG HTQT RERERNTQRLRDRERRE GRHTH +T  HT R
Sbjct: 65  IRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQR 112


>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
           sapiens]
          Length = 124

 Score =  181 bits (460), Expect = 8e-47
 Identities = 88/111 (79%), Positives = 97/111 (87%), Gaps = 2/111 (1%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLLRDRRISSRGPGLH  KA+P+++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 6   QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTH--RHTHRVL 113
           +P+THTHTG HTQT RERERNTQRLRDRERRENGRHTHT TH  RHT   L
Sbjct: 66  QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEAL 116


>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
           sapiens]
          Length = 125

 Score =  179 bits (455), Expect = 3e-46
 Identities = 87/112 (77%), Positives = 97/112 (86%), Gaps = 3/112 (2%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLLRDRRISSRGPGLH  KA+P+++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 6   QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTH---TYTHRHTHRVL 113
           +P+THTHTG HTQT RERERNTQRLRDRERRENGRHTH   T+T RHT   L
Sbjct: 66  QPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTTHTQRHTEEAL 117


>gi|239752497 PREDICTED: similar to family with sequence similarity
           27, member D1, partial [Homo sapiens]
          Length = 122

 Score =  178 bits (451), Expect = 9e-46
 Identities = 85/107 (79%), Positives = 93/107 (86%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLR++RISSRGPG HTPKA+  RRK LT GLMTQAE +K+AHQRQAAMR+TALW TGH
Sbjct: 5   FQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGH 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           I P+THTHTG HTQT RERERNTQRLRDRERRE  RHTHT+TH  TH
Sbjct: 65  IWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETH 111


>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
           sapiens]
          Length = 122

 Score =  176 bits (447), Expect = 3e-45
 Identities = 84/109 (77%), Positives = 94/109 (86%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLLRDRRISSRGPGLH  KA+P+++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 6   QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           +P+THTHTG HTQT RERERNTQRLRDRERREN  HT T+T RHT   L
Sbjct: 66  QPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEAL 114


>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 122

 Score =  173 bits (439), Expect = 2e-44
 Identities = 84/109 (77%), Positives = 90/109 (82%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLL+DRRI SRGPG H  KA+PR RK LTTGLMTQAE QK+  QRQAAM+ETALW TGHI
Sbjct: 6   QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           +P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T  HT   L
Sbjct: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114


>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
           sapiens]
          Length = 122

 Score =  173 bits (439), Expect = 2e-44
 Identities = 84/109 (77%), Positives = 90/109 (82%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLL+DRRI SRGPG H  KA+PR RK LTTGLMTQAE QK+  QRQAAM+ETALW TGHI
Sbjct: 6   QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           +P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T  HT   L
Sbjct: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114


>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
           sapiens]
          Length = 122

 Score =  173 bits (439), Expect = 2e-44
 Identities = 84/109 (77%), Positives = 90/109 (82%)

Query: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
           QLL+DRRI SRGPG H  KA+PR RK LTTGLMTQAE QK+  QRQAAM+ETALW TGHI
Sbjct: 6   QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
           +P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T  HT   L
Sbjct: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114


>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 134

 Score =  156 bits (395), Expect = 3e-39
 Identities = 79/107 (73%), Positives = 85/107 (79%), Gaps = 6/107 (5%)

Query: 4   FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
           FQLLRDR ISS GPGLHTPKA PRRR+ LTTG  TQAE QK+AHQRQA MRE ALW TG 
Sbjct: 5   FQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALWRTGR 64

Query: 64  IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
           IRP       T+ QTDRERERNTQR RD+ER+ENGRHTHT+T  HTH
Sbjct: 65  IRPE------TYMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTH 105


>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
           sapiens]
          Length = 228

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 44/112 (39%), Positives = 54/112 (48%), Gaps = 30/112 (26%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAM-RETALWCTGHIRPRTHTHTGTHTQTD 79
           TPK EP  ++ L TG  TQAE + +A Q++    R  A    G   PR      THTQTD
Sbjct: 10  TPKPEPPGKR-LPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTD 63

Query: 80  RERERNTQRLRDRERRENGR---------------------HTHTYTHRHTH 110
           R+R+R   R ++RE RE  R                     HTHT THRHTH
Sbjct: 64  RDRKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTH 113



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 20  HTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQT 78
           HT     R+R         + ER+++   R+   RET +      R  THT T  HT T
Sbjct: 59  HTQTDRDRKRGRRKEREGREGERERE---RERLKRETVVGTQTRARAHTHTQTHRHTHT 114


>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 135

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 18/27 (66%), Positives = 22/27 (81%)

Query: 68  THTHTGTHTQTDRERERNTQRLRDRER 94
           THTHT THT+ +RE ER T+R R+RER
Sbjct: 74  THTHTHTHTENERESERETERERERER 100



 Score = 30.0 bits (66), Expect = 0.41
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 68  THTHTGTHTQTDRERERNTQRLRD 91
           THTHT    +++RE ER  +R RD
Sbjct: 78  THTHTENERESERETERERERERD 101


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 3/104 (2%)

Query: 8   RDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPR 67
           R R   ++    H+ +   R R+  T    T+ ER++Q  + +   R+T           
Sbjct: 193 RQREKENKTEDRHSERGRERERERETE---TETERKRQTDRERDRQRKTEREREKQAERE 249

Query: 68  THTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
             +   T    +RERER+  R RDR ++E  R T     R T R
Sbjct: 250 RASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTER 293



 Score = 38.5 bits (88), Expect = 0.001
 Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCT-----GHIRPRTHTHTGTH 75
           T +   R+RK       T+ ER+KQA + +A+ RET             R R        
Sbjct: 228 TDRERDRQRK-------TEREREKQAERERASERETERDKERERERDRDRDRDRRQKERE 280

Query: 76  TQTDRERERNTQRLRDRER-RENGRHTHTYTHRHTHR 111
            QTDR+R+R T+R R+ ER RE  R       R+  R
Sbjct: 281 RQTDRKRQRRTERDRETERKRERQRERERERERNRKR 317



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 19/77 (24%), Positives = 33/77 (42%)

Query: 23  KAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRER 82
           K E  R +        + ER ++  + +   R+T +    + +           + +RER
Sbjct: 316 KRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERER 375

Query: 83  ERNTQRLRDRERRENGR 99
           ER+ Q  R+RE RE  R
Sbjct: 376 ERDRQSAREREERERDR 392



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDR 80
           T +   R R   T G   Q ER++Q    +   R+T        R R    T  + Q +R
Sbjct: 131 TEREGERGRDRQTDG---QRERERQRDAEKERERQTD-------RERQR-QTERNRQKER 179

Query: 81  ERERNTQRLRDRER-RENGRHTHTYTHRHTHR 111
           ERE+N Q  R+RER RE    T     RH+ R
Sbjct: 180 EREKNRQERRERERQREKENKTE---DRHSER 208



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 39  QAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDR----ERERNTQRLRDRER 94
           Q ER+++  +RQ   RET            H     H +  R    ERER T R RDR+ 
Sbjct: 59  QKERERRREKRQTE-RETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQ- 116

Query: 95  RENGRHTHTYTHRHTHR 111
           RE  R+      R T R
Sbjct: 117 REKERNRQKERERETER 133



 Score = 30.4 bits (67), Expect = 0.32
 Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 20/107 (18%)

Query: 8   RDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPR 67
           R+RR   R     T +   RRR+           R++  H+ +   RE            
Sbjct: 62  RERRREKRQTERETDRKRERRRE-------KDRHRKRDRHRERQRDREK----------E 104

Query: 68  THTHTGTHTQTDRERERNTQRLRDRERR---ENGRHTHTYTHRHTHR 111
               T       RE+ERN Q+ R+RE     E GR   T   R   R
Sbjct: 105 RERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERER 151



 Score = 29.6 bits (65), Expect = 0.54
 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%)

Query: 25  EPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERER 84
           E  R++   T +  +  RQ     R+ A RE         R R         + +RER+R
Sbjct: 340 ERERKRKRQTEMDRERNRQTGREGRRQAERERE-------RERERDRQSAREREERERDR 392

Query: 85  NTQRLRDRER-----RENGRHTHTYTHRHTHR 111
           +  R ++RER     R+  R T     R   R
Sbjct: 393 DRDRQKERERQTEKDRDGQRETEKQREREKDR 424



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 79  DRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
           DRER R  +R R RE+R+  R T     R   +
Sbjct: 53  DRERNRQKERERRREKRQTERETDRKRERRREK 85



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 8   RDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPR 67
           RDR+   +        AE  R +        Q ER +Q  + +   R+         R R
Sbjct: 139 RDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQER-------RER 191

Query: 68  THTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
                  +   DR  ER  +R R+RE       T T   R T R
Sbjct: 192 ERQREKENKTEDRHSERGRERERERE-----TETETERKRQTDR 230



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 17/68 (25%)

Query: 39  QAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQRLRDRER---R 95
           Q ER++Q  + +   RET                    + DRE ER  +R R+RE+   R
Sbjct: 397 QKERERQTEKDRDGQRET--------------EKQREREKDRESERGRERGREREKQKGR 442

Query: 96  ENGRHTHT 103
           E  R   T
Sbjct: 443 ERDRERQT 450


>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 8/84 (9%)

Query: 28  RRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQ 87
           R++    G  T+ ER +Q  +     RE           +   H     QTDRE+ER  Q
Sbjct: 7   RKRETDRGKETERERDRQRERENQTERENR-------HRQRDRHRERDRQTDREKERERQ 59

Query: 88  RLRDRERRENGRHTHTYTHRHTHR 111
           + RDR+R+   R T   T R   R
Sbjct: 60  KERDRQRQRE-RETERETERQRER 82



 Score = 32.3 bits (72), Expect = 0.083
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 39  QAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQRLRDRER-REN 97
           Q +R++   + +   RET      + +        T  + DRERER  QR R+R+R RE 
Sbjct: 91  QTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRER 150

Query: 98  GRHTHTYTHRHTHR 111
            R T     R   R
Sbjct: 151 KRETDRERQRWAER 164



 Score = 30.8 bits (68), Expect = 0.24
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 18/107 (16%)

Query: 8   RDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPR 67
           R+R   +     H  + +  R +   T    + ERQK+  +++   RET           
Sbjct: 25  RERENQTERENRHRQR-DRHRERDRQTDREKERERQKERDRQRQRERET----------- 72

Query: 68  THTHTGTHTQTDRERERNTQRLRDRER---RENGRHTHTYTHRHTHR 111
                 T  Q +R+R+R  +R  DRER   R+  R   T  +R  +R
Sbjct: 73  ---ERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNR 116



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 8   RDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPR 67
           R+R  + +G      + E  R +        + ERQ+Q  +++   RE   W     R +
Sbjct: 110 RNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKK 169

Query: 68  THTHTGTHTQTDRERERNTQRLRDRERRENGR 99
                    + +R++ER  ++  ++ R +  R
Sbjct: 170 -------ERKKERKKERKEKKKEEKRREDKKR 194


>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
           [Homo sapiens]
          Length = 213

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 15/73 (20%)

Query: 39  QAERQKQAHQRQAAMRETALWCTGHIRPRT-HTHTGTHTQTDRER----ERNTQRLRDRE 93
           + ERQ++  + +   RET        R R     T  HT+TDRER    ER  +R+RDRE
Sbjct: 71  EGERQRERERDRDRQRETE-------RERDKERETDRHTETDRERQKQKEREMERVRDRE 123

Query: 94  R---RENGRHTHT 103
           R   +E GR   T
Sbjct: 124 REKQKEMGRERQT 136



 Score = 34.7 bits (78), Expect = 0.017
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 28  RRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQ 87
           R K    G   Q +R+    + + A RE     TG  R     H       +RERER  +
Sbjct: 124 REKQKEMGRERQTDRETDRERERQAERERE---TGRERKTEDRHR------ERERERKRE 174

Query: 88  RLRDRERRENGRHT 101
           R R RE +E  RHT
Sbjct: 175 RERKRETKERERHT 188



 Score = 33.1 bits (74), Expect = 0.049
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 69  HTHTGTHTQT-DRERERNTQRLRDRERRENGRHTHTYTHRHTHR 111
           HTHT T T    RER R T R RDR +       H+   R   R
Sbjct: 9   HTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDR 52



 Score = 32.3 bits (72), Expect = 0.083
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 77  QTDRERERNTQRLRDRERR---ENGRHTHTYTHRHT 109
           QTDRE ER  +R RDR+R+   E  R     T RHT
Sbjct: 67  QTDREGERQRERERDRDRQRETERERDKERETDRHT 102



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 10/67 (14%)

Query: 38  TQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGT----------HTQTDRERERNTQ 87
           T  ER++QA + +   RE         R R                 HT  +RER+R T 
Sbjct: 140 TDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETD 199

Query: 88  RLRDRER 94
           R RDR+R
Sbjct: 200 RKRDRQR 206



 Score = 30.4 bits (67), Expect = 0.32
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 15/96 (15%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDR 80
           T +   R ++  T    ++ +RQ+   + +   R+                T    +  R
Sbjct: 27  TDRERDRAKESKTEDRHSERDRQRDRERNRERDRDR----------EREKQTDREGERQR 76

Query: 81  ERERNTQRLRDRER-----RENGRHTHTYTHRHTHR 111
           ERER+  R R+ ER     RE  RHT T   R   +
Sbjct: 77  ERERDRDRQRETERERDKERETDRHTETDRERQKQK 112



 Score = 28.9 bits (63), Expect = 0.92
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 33 TTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDR--ERERNTQRLR 90
          T G  T  E +    QR+   RET        R +       H++ DR  +RERN +R R
Sbjct: 5  TEGRHTHTETETMDRQRERR-RETD---RERDRAKESKTEDRHSERDRQRDRERNRERDR 60

Query: 91 DRERRE 96
          DRER +
Sbjct: 61 DREREK 66



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 23  KAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQT-DRE 81
           K E R     T  +  Q ER+++  + +   +E+        R R         +  DRE
Sbjct: 4   KTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDRE 63

Query: 82  RERNTQRLRDRER-RENGRHTHTYTHR 107
           RE+ T R  +R+R RE  R     T R
Sbjct: 64  REKQTDREGERQRERERDRDRQRETER 90


>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 68  THTHTGTHTQTDRER-ERNTQRLRDRER 94
           THTHT THT+ +RE  ER  +R R+RER
Sbjct: 74  THTHTHTHTENERESGERQRERERERER 101


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 23   KAEPRRRKGLTTGLMTQAERQKQAHQ---RQAAMRETALWCTGHIRPRTHTHTGTHTQTD 79
            +A+ R ++        Q ER+K+A +   RQ    +         R R           D
Sbjct: 1244 RAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRD 1303

Query: 80   RERERNTQRLRDRERRENGRHTHT 103
            R+RER+ +R R+R+RR+  RH+ +
Sbjct: 1304 RDRERDRERGRERDRRDTKRHSRS 1327



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 22   PKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRE 81
            P+AE R ++        + ER+ +  +R  + RE   W    +R    + + +  +  +E
Sbjct: 1131 PRAEQREQERAVREQWAEREREMERRERTRSERE---WDRDKVREGPRSRSRSRDRRRKE 1187

Query: 82   RERNTQRLRDRERR 95
            R ++ ++  +++ +
Sbjct: 1188 RAKSKEKKSEKKEK 1201



 Score = 25.8 bits (55), Expect = 7.8
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 39   QAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENG 98
            +   Q++A + Q A RE  +      R RT +         RE  R+  R RDR R+E  
Sbjct: 1134 EQREQERAVREQWAEREREM----ERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERA 1189

Query: 99   R 99
            +
Sbjct: 1190 K 1190


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 81   ERERNTQRLRDRERRENGRHTHTYTHRHTH 110
            ERER  +R RDR      RH HT  H HTH
Sbjct: 1440 EREREAERERDRHSPFGQRHLHT--HHHTH 1467


>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 15/75 (20%)

Query: 38  TQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTGTHTQTDRERERNTQRLRDRER-RE 96
           T+ ER++Q  + +   R+T               T    +TDRE ER T R R+R+R R+
Sbjct: 195 TEKERERQTDRERDRQRKT--------------QTERQRETDREGERETDRRRERQRDRD 240

Query: 97  NGRHTHTYTHRHTHR 111
            G+       R   R
Sbjct: 241 RGKERDRERDRKEER 255



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 13/80 (16%)

Query: 39  QAERQKQAHQRQAAMRETALWCTGHIRPRTH-------THTGTHTQTDRERERNTQRLRD 91
           + ER++Q  + +   RET    T   R R         T      Q D E+ER  Q  R+
Sbjct: 150 EKERERQTEKDRDGQRETE---TERERDREREKQKERETERDRDRQRDTEKERERQTDRE 206

Query: 92  RERRENGRHTHTYTHRHTHR 111
           R+R+   R T T   R T R
Sbjct: 207 RDRQ---RKTQTERQRETDR 223



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRER-RENGRHTHTYTHRHTHR 111
           R R        T  +R+RE+ T+  RDRER ++ GR       R   R
Sbjct: 98  RDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERER 145



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 25/107 (23%)

Query: 27  RRRKGLTTGL------MTQAERQKQAHQRQAAMRETALWCTGHIRPRTHTHTG-----TH 75
           RRRK   T         T+ ER ++  +++   RE      G  R R           T 
Sbjct: 102 RRRKEKETNRNRDREKQTEIERDREREKQKGRERERD---RGRERERDRDREKERERQTE 158

Query: 76  TQTDRERERNTQRLRDRER-----------RENGRHTHTYTHRHTHR 111
              D +RE  T+R RDRER           R+  R T     R T R
Sbjct: 159 KDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDR 205



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 81  ERERNTQRLRDRERRENGRHTH 102
           E+ER+  R RDRERR   + T+
Sbjct: 89  EKERDRDRKRDRERRRKEKETN 110


>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
           12A isoform b [Homo sapiens]
          Length = 943

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQA--AMRETALWCTGHIRPRTHT-----HTG 73
           T +   RRR  LT     ++E Q++A  RQA  + R T       ++    T      T 
Sbjct: 572 TTEVRERRRSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTR 631

Query: 74  THTQTDRERERNTQRLRDRERRENGRHTHT 103
           T  Q + E+E+  +  +D+E++E  + + T
Sbjct: 632 TREQENEEKEKEEKEKQDKEKQEEKKESET 661


>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
           12A isoform a [Homo sapiens]
          Length = 1030

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 21  TPKAEPRRRKGLTTGLMTQAERQKQAHQRQA--AMRETALWCTGHIRPRTHT-----HTG 73
           T +   RRR  LT     ++E Q++A  RQA  + R T       ++    T      T 
Sbjct: 659 TTEVRERRRSYLTPVRDEESESQRKARSRQARQSRRSTQGVTLTDLQEAEKTIGRSRSTR 718

Query: 74  THTQTDRERERNTQRLRDRERRENGRHTHT 103
           T  Q + E+E+  +  +D+E++E  + + T
Sbjct: 719 TREQENEEKEKEEKEKQDKEKQEEKKESET 748


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,743,327
Number of Sequences: 37866
Number of extensions: 185360
Number of successful extensions: 2240
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 618
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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