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Search of human proteins with 111118983
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111118983 ferredoxin reductase isoform 2 precursor [Homo
sapiens]
(497 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111118983 ferredoxin reductase isoform 2 precursor [Homo sapi... 1017 0.0
gi|111118981 ferredoxin reductase isoform 1 precursor [Homo sapi... 999 0.0
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 33 0.78
gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens] 32 1.3
gi|8923789 FEV (ETS oncogene family) [Homo sapiens] 30 3.9
gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens] 30 5.1
gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo ... 30 5.1
gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo ... 30 5.1
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 30 5.1
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 30 5.1
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 30 6.6
gi|63054864 phosphoprotein associated with glycosphingolipid mic... 30 6.6
gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo ... 29 8.7
gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo ... 29 8.7
gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo ... 29 8.7
>gi|111118983 ferredoxin reductase isoform 2 precursor [Homo
sapiens]
Length = 497
Score = 1017 bits (2630), Expect = 0.0
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH
Sbjct: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
Query: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP
Sbjct: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
Query: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV
Sbjct: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
Query: 181 ILGQGNVALDVARILLTPPEHLEALLLCQRTDITKAALGVLRQSRVKTVWLVGRRGPLQV 240
ILGQGNVALDVARILLTPPEHLEALLLCQRTDITKAALGVLRQSRVKTVWLVGRRGPLQV
Sbjct: 181 ILGQGNVALDVARILLTPPEHLEALLLCQRTDITKAALGVLRQSRVKTVWLVGRRGPLQV 240
Query: 241 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 300
AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA
Sbjct: 241 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 300
Query: 301 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 360
RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG
Sbjct: 301 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 360
Query: 361 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 420
LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS
Sbjct: 361 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 420
Query: 421 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 480
FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK
Sbjct: 421 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 480
Query: 481 PREKLVDPQEMLRLLGH 497
PREKLVDPQEMLRLLGH
Sbjct: 481 PREKLVDPQEMLRLLGH 497
>gi|111118981 ferredoxin reductase isoform 1 precursor [Homo
sapiens]
Length = 491
Score = 999 bits (2583), Expect = 0.0
Identities = 491/497 (98%), Positives = 491/497 (98%), Gaps = 6/497 (1%)
Query: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH
Sbjct: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
Query: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP
Sbjct: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
Query: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV
Sbjct: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
Query: 181 ILGQGNVALDVARILLTPPEHLEALLLCQRTDITKAALGVLRQSRVKTVWLVGRRGPLQV 240
ILGQGNVALDVARILLTPPEHLE RTDITKAALGVLRQSRVKTVWLVGRRGPLQV
Sbjct: 181 ILGQGNVALDVARILLTPPEHLE------RTDITKAALGVLRQSRVKTVWLVGRRGPLQV 234
Query: 241 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 300
AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA
Sbjct: 235 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 294
Query: 301 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 360
RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG
Sbjct: 295 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 354
Query: 361 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 420
LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS
Sbjct: 355 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 414
Query: 421 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 480
FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK
Sbjct: 415 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 474
Query: 481 PREKLVDPQEMLRLLGH 497
PREKLVDPQEMLRLLGH
Sbjct: 475 PREKLVDPQEMLRLLGH 491
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 32.7 bits (73), Expect = 0.78
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 24/126 (19%)
Query: 246 ELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASA 305
E +I PG P+ P+ EV R RL +L+ A
Sbjct: 2335 EASGLILAPGPAPLFPPL--------AAEVGMARARLAQLVRL----------AGGHCRR 2376
Query: 306 SRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDME-DLPCGLVLS 364
W F P P PD R G RLA+ LE + EA A GD++ L C L ++
Sbjct: 2377 DTLWKRLFLLEP----PGPDRLRLGG-RLALAELEELLEAVHAKSIGDIDPQLDCFLSMT 2431
Query: 365 SIGYKS 370
Y+S
Sbjct: 2432 VSWYQS 2437
>gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens]
Length = 494
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 40 QICVVGSGPAGFYTAQHLLKH--PQAHVDIYEKQPVPFGLVRFGVAPDHPE 88
+I VVG+G G A L +H P+ +D+YEK V L V H E
Sbjct: 28 KIAVVGAGIGGSAVAHFLQQHFGPRVQIDVYEKGTVGGRLATISVNKQHYE 78
>gi|8923789 FEV (ETS oncogene family) [Homo sapiens]
Length = 238
Score = 30.4 bits (67), Expect = 3.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 428 LQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDW 464
L L AGL P P PG + + + +S GV P FS W
Sbjct: 160 LYKLPAGLAPL-PFPGLSKLNLMAASAGVAPAGFSYW 195
>gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens]
Length = 543
Score = 30.0 bits (66), Expect = 5.1
Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 336 VTRLEGVDEATRAVPTGDMEDLPCGLVL--SSIGYKSRPV-DPSVPFDSKLGVIPNVEGR 392
VT G + VP+ L G+ + + Y++R D S + +I N EG
Sbjct: 68 VTPFGGASSSFSVVPSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGD 127
Query: 393 VMDVPGLYC--SGWVKRGPTGVIATTMTDSFLTGQMLLQDLKAGLLPSGPRPGYAAIQAL 450
+ + +G++ + + + G+M +D + LL G + G ++
Sbjct: 128 WWEARSIATGKNGYIPSNYVAPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 187
Query: 451 LSSRGVRPVSFSDWEKLDAEEV 472
+++G +S DW+++ + V
Sbjct: 188 ETTKGAYSLSIRDWDEIRGDNV 209
>gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo
sapiens]
Length = 455
Score = 30.0 bits (66), Expect = 5.1
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 286 LLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEA 345
L + E P RQA AS L + + ++L P+GR + L GV E
Sbjct: 54 LTKEEAEGPRKDSGVRQARASL---LGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEV 110
Query: 346 TRAVPTGDMEDLPCGLVLSSIGYKSRPVDPSV---PFDSKLGVIPNVEGRVMDVPGLYCS 402
+R P G VL S+ + SV P S GV+P +G + G+
Sbjct: 111 SREAPQGSAP------VLGSLWWGEFRAQGSVVGGPAGS-TGVLP--QGSEEESMGVRSQ 161
Query: 403 GWVK 406
GW++
Sbjct: 162 GWLR 165
>gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo
sapiens]
Length = 455
Score = 30.0 bits (66), Expect = 5.1
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 286 LLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEA 345
L + E P RQA AS L + + ++L P+GR + L GV E
Sbjct: 54 LTKEEAEGPRKDSGVRQARASL---LGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEV 110
Query: 346 TRAVPTGDMEDLPCGLVLSSIGYKSRPVDPSV---PFDSKLGVIPNVEGRVMDVPGLYCS 402
+R P G VL S+ + SV P S GV+P +G + G+
Sbjct: 111 SREAPQGSAP------VLGSLWWGEFRAQGSVVGGPAGS-TGVLP--QGSEEESMGVRSQ 161
Query: 403 GWVK 406
GW++
Sbjct: 162 GWLR 165
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 30.0 bits (66), Expect = 5.1
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 253 LPGA-RPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGL 311
+PGA RP F ++ +VPR T+ + T+T+ GP AA A+A+ A
Sbjct: 450 MPGAIRPAAPRPPFSTMRPASSQVPRVMS--TQRVANTSTQTMGPRPAAAAAAATPA--- 504
Query: 312 RFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVP 350
V P + AAGVR L + T P
Sbjct: 505 --------VRTVPQYKYAAGVRNPQQHLNAQPQVTMQQP 535
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 30.0 bits (66), Expect = 5.1
Identities = 19/85 (22%), Positives = 38/85 (44%)
Query: 273 KEVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGV 332
++ PR R+RLT+ +++ G ++ + A G+R+F LP R
Sbjct: 35 RQAPRLRRRLTQSAPGRGSDRVGASQRLPRRFEFCAAGVRWFSELCPRLPRAGARERVRG 94
Query: 333 RLAVTRLEGVDEATRAVPTGDMEDL 357
L TR+ ++P+ D+ ++
Sbjct: 95 FLTQTRVRSAQSPGGSLPSDDLGEM 119
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 29.6 bits (65), Expect = 6.6
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 321 LPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCGLVLSS--IGYKSRPVDPSVP 378
+P P RR A +V R G +TR +G++ G + S +G S V P+V
Sbjct: 686 VPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSGSLPSQDLLGTSSATVTPAVH 745
Query: 379 FDSKLGVIPN 388
D GV P+
Sbjct: 746 SDFVSGVSPH 755
>gi|63054864 phosphoprotein associated with glycosphingolipid
microdomains 1 [Homo sapiens]
Length = 432
Score = 29.6 bits (65), Expect = 6.6
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 364 SSIGYKSRPVDPSVPFD---------SKLGVIPNVEGRVMDVP-GLYCS--GWVKRGPTG 411
SS+ YKSR DP++ + +K G + N G+ + VP Y S G +R P+
Sbjct: 295 SSLSYKSREEDPTLTEEEISAMYSSVNKPGQLVNKSGQSLTVPESTYTSIQGDPQRSPSS 354
Query: 412 V--IATTMTDSFLTGQMLLQDLKAGLLPSGPRPGYAAIQAL 450
+ T+ D T L AG P P Y AIQ L
Sbjct: 355 CNDLYATVKDFEKTPNSTLP--PAGRPSEEPEPDYEAIQTL 393
>gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.7
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 404 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 453
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 454 RGVRPVSFSDWEK 466
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
>gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.7
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 404 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 453
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 454 RGVRPVSFSDWEK 466
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
>gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.7
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 404 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 453
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 454 RGVRPVSFSDWEK 466
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,992,837
Number of Sequences: 37866
Number of extensions: 1109828
Number of successful extensions: 2415
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2411
Number of HSP's gapped (non-prelim): 15
length of query: 497
length of database: 18,247,518
effective HSP length: 106
effective length of query: 391
effective length of database: 14,233,722
effective search space: 5565385302
effective search space used: 5565385302
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.