Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 111118981
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111118981 ferredoxin reductase isoform 1 precursor [Homo
sapiens]
(491 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111118981 ferredoxin reductase isoform 1 precursor [Homo sapi... 1006 0.0
gi|111118983 ferredoxin reductase isoform 2 precursor [Homo sapi... 999 0.0
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 33 0.77
gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens] 32 1.3
gi|8923789 FEV (ETS oncogene family) [Homo sapiens] 30 3.8
gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens] 30 5.0
gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo ... 30 5.0
gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo ... 30 5.0
gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] 30 5.0
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 30 5.0
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 30 6.5
gi|63054864 phosphoprotein associated with glycosphingolipid mic... 30 6.5
gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo ... 29 8.5
gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo ... 29 8.5
gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo ... 29 8.5
>gi|111118981 ferredoxin reductase isoform 1 precursor [Homo
sapiens]
Length = 491
Score = 1006 bits (2600), Expect = 0.0
Identities = 491/491 (100%), Positives = 491/491 (100%)
Query: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH
Sbjct: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
Query: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP
Sbjct: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
Query: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV
Sbjct: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
Query: 181 ILGQGNVALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKE 240
ILGQGNVALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKE
Sbjct: 181 ILGQGNVALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKE 240
Query: 241 LREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASAS 300
LREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASAS
Sbjct: 241 LREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASAS 300
Query: 301 RAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCGLVLSSI 360
RAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCGLVLSSI
Sbjct: 301 RAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCGLVLSSI 360
Query: 361 GYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDSFLTGQM 420
GYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDSFLTGQM
Sbjct: 361 GYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDSFLTGQM 420
Query: 421 LLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLV 480
LLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLV
Sbjct: 421 LLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLV 480
Query: 481 DPQEMLRLLGH 491
DPQEMLRLLGH
Sbjct: 481 DPQEMLRLLGH 491
>gi|111118983 ferredoxin reductase isoform 2 precursor [Homo
sapiens]
Length = 497
Score = 999 bits (2583), Expect = 0.0
Identities = 491/497 (98%), Positives = 491/497 (98%), Gaps = 6/497 (1%)
Query: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH
Sbjct: 1 MASRCWRWWGWSAWPRTRLPPAGSTPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKH 60
Query: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP
Sbjct: 61 PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFTQTAHSGRCAFWGNVEVGRDVTVP 120
Query: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV
Sbjct: 121 ELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDLSCDTAV 180
Query: 181 ILGQGNVALDVARILLTPPEHLE------RTDITKAALGVLRQSRVKTVWLVGRRGPLQV 234
ILGQGNVALDVARILLTPPEHLE RTDITKAALGVLRQSRVKTVWLVGRRGPLQV
Sbjct: 181 ILGQGNVALDVARILLTPPEHLEALLLCQRTDITKAALGVLRQSRVKTVWLVGRRGPLQV 240
Query: 235 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 294
AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA
Sbjct: 241 AFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAA 300
Query: 295 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 354
RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG
Sbjct: 301 RQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCG 360
Query: 355 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 414
LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS
Sbjct: 361 LVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVIATTMTDS 420
Query: 415 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 474
FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK
Sbjct: 421 FLTGQMLLQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGK 480
Query: 475 PREKLVDPQEMLRLLGH 491
PREKLVDPQEMLRLLGH
Sbjct: 481 PREKLVDPQEMLRLLGH 497
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 32.7 bits (73), Expect = 0.77
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 24/126 (19%)
Query: 240 ELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASA 299
E +I PG P+ P+ EV R RL +L+ A
Sbjct: 2335 EASGLILAPGPAPLFPPL--------AAEVGMARARLAQLVRL----------AGGHCRR 2376
Query: 300 SRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDME-DLPCGLVLS 358
W F P P PD R G RLA+ LE + EA A GD++ L C L ++
Sbjct: 2377 DTLWKRLFLLEP----PGPDRLRLGG-RLALAELEELLEAVHAKSIGDIDPQLDCFLSMT 2431
Query: 359 SIGYKS 364
Y+S
Sbjct: 2432 VSWYQS 2437
>gi|226442763 prenylcysteine oxidase 1 like [Homo sapiens]
Length = 494
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 40 QICVVGSGPAGFYTAQHLLKH--PQAHVDIYEKQPVPFGLVRFGVAPDHPE 88
+I VVG+G G A L +H P+ +D+YEK V L V H E
Sbjct: 28 KIAVVGAGIGGSAVAHFLQQHFGPRVQIDVYEKGTVGGRLATISVNKQHYE 78
>gi|8923789 FEV (ETS oncogene family) [Homo sapiens]
Length = 238
Score = 30.4 bits (67), Expect = 3.8
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 422 LQDLKAGLLPSGPRPGYAAIQALLSSRGVRPVSFSDW 458
L L AGL P P PG + + + +S GV P FS W
Sbjct: 160 LYKLPAGLAPL-PFPGLSKLNLMAASAGVAPAGFSYW 195
>gi|4885661 viral oncogene yes-1 homolog 1 [Homo sapiens]
Length = 543
Score = 30.0 bits (66), Expect = 5.0
Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 330 VTRLEGVDEATRAVPTGDMEDLPCGLVL--SSIGYKSRPV-DPSVPFDSKLGVIPNVEGR 386
VT G + VP+ L G+ + + Y++R D S + +I N EG
Sbjct: 68 VTPFGGASSSFSVVPSSYPAGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGD 127
Query: 387 VMDVPGLYC--SGWVKRGPTGVIATTMTDSFLTGQMLLQDLKAGLLPSGPRPGYAAIQAL 444
+ + +G++ + + + G+M +D + LL G + G ++
Sbjct: 128 WWEARSIATGKNGYIPSNYVAPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRES 187
Query: 445 LSSRGVRPVSFSDWEKLDAEEV 466
+++G +S DW+++ + V
Sbjct: 188 ETTKGAYSLSIRDWDEIRGDNV 209
>gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo
sapiens]
Length = 455
Score = 30.0 bits (66), Expect = 5.0
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 280 LLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEA 339
L + E P RQA AS L + + ++L P+GR + L GV E
Sbjct: 54 LTKEEAEGPRKDSGVRQARASL---LGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEV 110
Query: 340 TRAVPTGDMEDLPCGLVLSSIGYKSRPVDPSV---PFDSKLGVIPNVEGRVMDVPGLYCS 396
+R P G VL S+ + SV P S GV+P +G + G+
Sbjct: 111 SREAPQGSAP------VLGSLWWGEFRAQGSVVGGPAGS-TGVLP--QGSEEESMGVRSQ 161
Query: 397 GWVK 400
GW++
Sbjct: 162 GWLR 165
>gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo
sapiens]
Length = 455
Score = 30.0 bits (66), Expect = 5.0
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 280 LLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEA 339
L + E P RQA AS L + + ++L P+GR + L GV E
Sbjct: 54 LTKEEAEGPRKDSGVRQARASL---LGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEV 110
Query: 340 TRAVPTGDMEDLPCGLVLSSIGYKSRPVDPSV---PFDSKLGVIPNVEGRVMDVPGLYCS 396
+R P G VL S+ + SV P S GV+P +G + G+
Sbjct: 111 SREAPQGSAP------VLGSLWWGEFRAQGSVVGGPAGS-TGVLP--QGSEEESMGVRSQ 161
Query: 397 GWVK 400
GW++
Sbjct: 162 GWLR 165
>gi|46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
Length = 636
Score = 30.0 bits (66), Expect = 5.0
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 247 LPGA-RPILDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGL 305
+PGA RP F ++ +VPR T+ + T+T+ GP AA A+A+ A
Sbjct: 450 MPGAIRPAAPRPPFSTMRPASSQVPRVMS--TQRVANTSTQTMGPRPAAAAAAATPA--- 504
Query: 306 RFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVDEATRAVP 344
V P + AAGVR L + T P
Sbjct: 505 --------VRTVPQYKYAAGVRNPQQHLNAQPQVTMQQP 535
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 30.0 bits (66), Expect = 5.0
Identities = 19/85 (22%), Positives = 38/85 (44%)
Query: 267 KEVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGV 326
++ PR R+RLT+ +++ G ++ + A G+R+F LP R
Sbjct: 35 RQAPRLRRRLTQSAPGRGSDRVGASQRLPRRFEFCAAGVRWFSELCPRLPRAGARERVRG 94
Query: 327 RLAVTRLEGVDEATRAVPTGDMEDL 351
L TR+ ++P+ D+ ++
Sbjct: 95 FLTQTRVRSAQSPGGSLPSDDLGEM 119
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 29.6 bits (65), Expect = 6.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 315 LPSPDGRRAAGVRLAVTRLEGVDEATRAVPTGDMEDLPCGLVLSS--IGYKSRPVDPSVP 372
+P P RR A +V R G +TR +G++ G + S +G S V P+V
Sbjct: 686 VPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSGSLPSQDLLGTSSATVTPAVH 745
Query: 373 FDSKLGVIPN 382
D GV P+
Sbjct: 746 SDFVSGVSPH 755
>gi|63054864 phosphoprotein associated with glycosphingolipid
microdomains 1 [Homo sapiens]
Length = 432
Score = 29.6 bits (65), Expect = 6.5
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 358 SSIGYKSRPVDPSVPFD---------SKLGVIPNVEGRVMDVP-GLYCS--GWVKRGPTG 405
SS+ YKSR DP++ + +K G + N G+ + VP Y S G +R P+
Sbjct: 295 SSLSYKSREEDPTLTEEEISAMYSSVNKPGQLVNKSGQSLTVPESTYTSIQGDPQRSPSS 354
Query: 406 V--IATTMTDSFLTGQMLLQDLKAGLLPSGPRPGYAAIQAL 444
+ T+ D T L AG P P Y AIQ L
Sbjct: 355 CNDLYATVKDFEKTPNSTLP--PAGRPSEEPEPDYEAIQTL 393
>gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 398 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 447
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 448 RGVRPVSFSDWEK 460
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
>gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 398 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 447
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 448 RGVRPVSFSDWEK 460
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
>gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo
sapiens]
Length = 141
Score = 29.3 bits (64), Expect = 8.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 398 WVKRGPTGVIATTMTDSFLTGQML-LQDLKAGLLPSGPRPGY---------AAIQALLSS 447
WV R ++T TD+ ML L+ + G PG+ AA++ +L S
Sbjct: 13 WVFRDVGAFLSTGSTDAAAPKGMLGLRSGRGGGRAGRKMPGFKSLGRIRGRAAVRVVLDS 72
Query: 448 RGVRPVSFSDWEK 460
R +RP F WE+
Sbjct: 73 RVIRPRPFLMWER 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,764,949
Number of Sequences: 37866
Number of extensions: 1099611
Number of successful extensions: 2389
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2385
Number of HSP's gapped (non-prelim): 15
length of query: 491
length of database: 18,247,518
effective HSP length: 106
effective length of query: 385
effective length of database: 14,233,722
effective search space: 5479982970
effective search space used: 5479982970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.