Guide to the Human Genome
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Search of human proteins with 111038143

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|111038143 glycine-N-acyltransferase isoform b [Homo sapiens]
         (163 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|111038143 glycine-N-acyltransferase isoform b [Homo sapiens]       332   7e-92
gi|111038137 glycine-N-acyltransferase isoform a [Homo sapiens]       331   2e-91
gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo ...   156   9e-39
gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo sa...   155   1e-38
gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]           149   1e-36
gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]           149   1e-36
gi|150010619 glycine-N-acyltransferase-like 2 [Homo sapiens]          140   4e-34
gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo sa...   138   2e-33
gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]           134   3e-32
gi|222831633 glycine N-acyltransferase-like protein 3 [Homo sapi...   108   2e-24
gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo sa...   105   2e-23
gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]          28   2.7  
gi|68299770 hypothetical protein LOC25871 [Homo sapiens]               28   2.7  
gi|98991773 cytochrome P450, family 2, subfamily C, polypeptide ...    27   7.8  
gi|7661968 epsin 4 [Homo sapiens]                                      27   7.8  
gi|239752785 PREDICTED: UPF0632 protein A [Homo sapiens]               27   7.8  
gi|239747336 PREDICTED: UPF0632 protein A [Homo sapiens]               27   7.8  
gi|239741161 PREDICTED: UPF0632 protein A [Homo sapiens]               27   7.8  
gi|193083148 cytochrome P450 family 2 subfamily C polypeptide 18...    27   7.8  
gi|13699816 cytochrome P450 family 2 subfamily C polypeptide 18 ...    27   7.8  
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]        27   7.8  

>gi|111038143 glycine-N-acyltransferase isoform b [Homo sapiens]
          Length = 163

 Score =  332 bits (852), Expect = 7e-92
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP 60
           MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP
Sbjct: 1   MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP 60

Query: 61  QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA 120
           QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA
Sbjct: 61  QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA 120

Query: 121 IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAM 163
           IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAM
Sbjct: 121 IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAM 163


>gi|111038137 glycine-N-acyltransferase isoform a [Homo sapiens]
          Length = 296

 Score =  331 bits (848), Expect = 2e-91
 Identities = 162/163 (99%), Positives = 163/163 (100%)

Query: 1   MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP 60
           MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP
Sbjct: 1   MMLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCP 60

Query: 61  QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA 120
           QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA
Sbjct: 61  QEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAA 120

Query: 121 IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAM 163
           IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKA+
Sbjct: 121 IKSFKVKQTQRILYMAAETAKELTPFLLKSKILSPNGGKPKAI 163


>gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo
           sapiens]
          Length = 339

 Score =  156 bits (394), Expect = 9e-39
 Identities = 71/140 (50%), Positives = 101/140 (72%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
           M+ L  ++ L  L KSL +S+P SLKVYG++FHINHGNPFN++ +VD WP++  V++ PQ
Sbjct: 38  MILLNNSERLLALFKSLARSIPESLKVYGSLFHINHGNPFNMEVLVDSWPEYQMVIIRPQ 97

Query: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
           +Q+MTDD+D YTN Y+++SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I+  A  
Sbjct: 98  KQEMTDDMDSYTNVYRVFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIRAAAFS 157

Query: 122 KSFKVKQTQRILYMAAETAK 141
            S KV+ ++ +L++  +  K
Sbjct: 158 NSVKVEHSRALLFVTEDILK 177


>gi|239744369 PREDICTED: similar to hCG1729961 isoform 3 [Homo
           sapiens]
          Length = 302

 Score =  155 bits (393), Expect = 1e-38
 Identities = 72/140 (51%), Positives = 100/140 (71%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
           M+ L  ++ L  L KSL +S+P SLKVYG++FHINHGNPFN++ +VD WP +  V++ PQ
Sbjct: 1   MILLNNSEQLLALFKSLARSIPESLKVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQ 60

Query: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
           +Q+MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I+  A  
Sbjct: 61  KQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFS 120

Query: 122 KSFKVKQTQRILYMAAETAK 141
            S KV+ ++ +L++  +  K
Sbjct: 121 NSVKVEHSRALLFVTEDILK 140


>gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 527

 Score =  149 bits (376), Expect = 1e-36
 Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 6/146 (4%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKV------YGTVFHINHGNPFNLKAVVDKWPDFNT 55
           M+ L  ++ L  L KSL +S+P SLKV      YG++FHINHGNPFN++ +VD WP +  
Sbjct: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144

Query: 56  VVVCPQEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAI 115
           V++ PQ+Q+MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I
Sbjct: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204

Query: 116 QNLAAIKSFKVKQTQRILYMAAETAK 141
           +  A   S KV+ ++ +L++  +  K
Sbjct: 205 RAAAFSNSVKVEHSRALLFVTEDILK 230


>gi|169203519 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 527

 Score =  149 bits (376), Expect = 1e-36
 Identities = 72/146 (49%), Positives = 100/146 (68%), Gaps = 6/146 (4%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKV------YGTVFHINHGNPFNLKAVVDKWPDFNT 55
           M+ L  ++ L  L KSL +S+P SLKV      YG++FHINHGNPFN++ +VD WP +  
Sbjct: 85  MILLNNSEQLLALFKSLARSIPESLKVKEQWEVYGSLFHINHGNPFNMEVLVDSWPGYQM 144

Query: 56  VVVCPQEQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAI 115
           V++ PQ+Q+MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I
Sbjct: 145 VIIRPQKQEMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGI 204

Query: 116 QNLAAIKSFKVKQTQRILYMAAETAK 141
           +  A   S KV+ ++ +L++  +  K
Sbjct: 205 KAAAFSNSVKVEHSRALLFVTEDILK 230


>gi|150010619 glycine-N-acyltransferase-like 2 [Homo sapiens]
          Length = 294

 Score =  140 bits (354), Expect = 4e-34
 Identities = 68/143 (47%), Positives = 94/143 (65%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
           ML L  +Q LQ+L KSL KS+P S+KVYG +F+I   NPFN++ +VD WPD+  V+  PQ
Sbjct: 1   MLVLHNSQKLQILYKSLEKSIPESIKVYGAIFNIKDKNPFNMEVLVDAWPDYQIVITRPQ 60

Query: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
           +Q+M DD DHYTNTY I++K P   +E L    +I+W+Q LQIQ  Q  L+EAI+ +A  
Sbjct: 61  KQEMKDDQDHYTNTYHIFTKAPDKLEEVLSYSNVISWEQTLQIQGCQEGLDEAIRKVATS 120

Query: 122 KSFKVKQTQRILYMAAETAKELT 144
           KS +V   + IL++     K  T
Sbjct: 121 KSVQVDYMKTILFIPELPKKHKT 143


>gi|239744367 PREDICTED: similar to hCG1729961 isoform 1 [Homo
           sapiens]
          Length = 333

 Score =  138 bits (347), Expect = 2e-33
 Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 2/138 (1%)

Query: 4   PLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQEQ 63
           PL    + + L   +++     L+VYG++FHINHGNPFN++ +VD WP +  V++ PQ+Q
Sbjct: 36  PLVSTDLSEQLR--IKEFFLEGLQVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQKQ 93

Query: 64  DMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAIKS 123
           +MTDD+D YTN Y+I+SKDPQ  QE L + E+INWKQ LQIQ  Q SL E I+  A   S
Sbjct: 94  EMTDDMDSYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFSNS 153

Query: 124 FKVKQTQRILYMAAETAK 141
            KV+ ++ +L++  +  K
Sbjct: 154 VKVEHSRALLFVTEDILK 171


>gi|31543157 glycine-N-acyltransferase-like 1 [Homo sapiens]
          Length = 333

 Score =  134 bits (337), Expect = 3e-32
 Identities = 58/116 (50%), Positives = 85/116 (73%)

Query: 26  LKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQEQDMTDDLDHYTNTYQIYSKDPQN 85
           LKVYG+V+HINHGNPFN++ +VD WP++  V++ PQ+Q+MTDD+D YTN Y+++SK+PQ 
Sbjct: 56  LKVYGSVYHINHGNPFNMEVLVDSWPEYQMVIIRPQKQEMTDDMDSYTNVYRMFSKEPQK 115

Query: 86  CQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAIKSFKVKQTQRILYMAAETAK 141
            +E L + E++NWKQ LQIQ  Q SL E I+     KS KV+ ++ +L +  +  K
Sbjct: 116 SEEVLKNCEIVNWKQRLQIQGLQESLGEGIRVATFSKSVKVEHSRALLLVTEDILK 171


>gi|222831633 glycine N-acyltransferase-like protein 3 [Homo
           sapiens]
          Length = 288

 Score =  108 bits (270), Expect = 2e-24
 Identities = 54/128 (42%), Positives = 74/128 (57%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
           ML L  +  L +LEK L+   P SLKVYG V +IN GNPF  + V+D WPDF  V+   Q
Sbjct: 1   MLVLNCSTKLLILEKMLKSCFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAVITRRQ 60

Query: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
            +  TD+LDHYTN Y ++ KD +  ++ L   ++ NW Q  QIQ  Q  L +  + +A  
Sbjct: 61  REAETDNLDHYTNAYAVFYKDVRAYRQLLEECDVFNWDQVFQIQGLQSELYDVSKAVANS 120

Query: 122 KSFKVKQT 129
           K   +K T
Sbjct: 121 KQLNIKLT 128


>gi|239744371 PREDICTED: similar to hCG1729961 isoform 2 [Homo
           sapiens]
          Length = 279

 Score =  105 bits (262), Expect = 2e-23
 Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 23/140 (16%)

Query: 2   MLPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQ 61
           M+ L  ++ L  L KSL +S+P SLKVYG++FHINHGNPFN++ +VD WP +  V++ PQ
Sbjct: 1   MILLNNSEQLLALFKSLARSIPESLKVYGSLFHINHGNPFNMEVLVDSWPGYQMVIIRPQ 60

Query: 62  EQDMTDDLDHYTNTYQIYSKDPQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAI 121
           +Q                        E L + E+INWKQ LQIQ  Q SL E I+  A  
Sbjct: 61  KQ-----------------------VEVLKNSEIINWKQKLQIQGFQESLGEGIKAAAFS 97

Query: 122 KSFKVKQTQRILYMAAETAK 141
            S KV+ ++ +L++  +  K
Sbjct: 98  NSVKVEHSRALLFVTEDILK 117


>gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]
          Length = 240

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 86  CQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAIKSF 124
           CQ F G P+L  W+Q ++    +    EA + +   K F
Sbjct: 182 CQVFEGRPKLATWRQRVEAAVGEDLFQEAHEVILKAKDF 220


>gi|68299770 hypothetical protein LOC25871 [Homo sapiens]
          Length = 567

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 79  YSKD---PQNCQEFLGSPELINWKQHLQIQSSQPSLNEAIQNLAAIKSFKVKQTQRILYM 135
           Y KD   P +  EFLG P    +K+ + I  +   +N+ +  L  I     + ++  L  
Sbjct: 216 YFKDFTFPSDITEFLGQPYFEAFKKKMPIAFAAKGINKLLNKLFLINEQSPRASEETLLG 275

Query: 136 AAETAKEL 143
            ++ AK++
Sbjct: 276 ISKKAKQM 283


>gi|98991773 cytochrome P450, family 2, subfamily C, polypeptide 8
           [Homo sapiens]
          Length = 490

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)

Query: 3   LPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHG-NPFNL--------KAVVDKWPDF 53
           LP+ G  MLQ+  K + KS     KVYG VF +  G NP  +        +A++D   +F
Sbjct: 36  LPIIG-NMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEF 94

Query: 54  NTVVVCPQEQDMTDDL 69
           +     P  Q +T  L
Sbjct: 95  SGRGNSPISQRITKGL 110


>gi|7661968 epsin 4 [Homo sapiens]
          Length = 625

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 3   LPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQE 62
           LP+  +Q   M++KS+ K+LP++         +++  P  ++    + P  NT++   Q+
Sbjct: 454 LPMSRSQNTDMVQKSVSKTLPSTWSDPSVNISLDNLLP-GMQPSKPQQPSLNTMI---QQ 509

Query: 63  QDMTDDLDHYTNTY 76
           Q+M   ++  T ++
Sbjct: 510 QNMQQPMNVMTQSF 523


>gi|239752785 PREDICTED: UPF0632 protein A [Homo sapiens]
          Length = 517

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 9   QMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVV-----DKWPDFNTVVVCPQEQ 63
           Q L   E     SL AS   Y T   I H N  +L AV+      + P+F    + P EQ
Sbjct: 229 QTLLQQESVRAGSLQAS---YTTEDLIKHYNCGDLSAVIFNHDTSQLPNFINTTLPPHEQ 285

Query: 64  DMTDDLDHYTNTYQIYSKD 82
               ++D Y     IY ++
Sbjct: 286 VTAQEIDSYFRQELIYKRN 304


>gi|239747336 PREDICTED: UPF0632 protein A [Homo sapiens]
          Length = 517

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 9   QMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVV-----DKWPDFNTVVVCPQEQ 63
           Q L   E     SL AS   Y T   I H N  +L AV+      + P+F    + P EQ
Sbjct: 229 QTLLQQESVRAGSLQAS---YTTEDLIKHYNCGDLSAVIFNHDTSQLPNFINTTLPPHEQ 285

Query: 64  DMTDDLDHYTNTYQIYSKD 82
               ++D Y     IY ++
Sbjct: 286 VTAQEIDSYFRQELIYKRN 304


>gi|239741161 PREDICTED: UPF0632 protein A [Homo sapiens]
          Length = 517

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 9   QMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVV-----DKWPDFNTVVVCPQEQ 63
           Q L   E     SL AS   Y T   I H N  +L AV+      + P+F    + P EQ
Sbjct: 229 QTLLQQESVRAGSLQAS---YTTEDLIKHYNCGDLSAVIFNHDTSQLPNFINTTLPPHEQ 285

Query: 64  DMTDDLDHYTNTYQIYSKD 82
               ++D Y     IY ++
Sbjct: 286 VTAQEIDSYFRQELIYKRN 304


>gi|193083148 cytochrome P450 family 2 subfamily C polypeptide 18
          isoform 2 [Homo sapiens]
          Length = 431

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 3  LPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVV 47
          LP+ G  +LQ+  K + KSL    KVYG VF +     F LK +V
Sbjct: 36 LPIIG-NILQLDVKDMSKSLTNFSKVYGPVFTVY----FGLKPIV 75


>gi|13699816 cytochrome P450 family 2 subfamily C polypeptide 18
          isoform 1 [Homo sapiens]
          Length = 490

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)

Query: 3  LPLQGAQMLQMLEKSLRKSLPASLKVYGTVFHINHGNPFNLKAVV 47
          LP+ G  +LQ+  K + KSL    KVYG VF +     F LK +V
Sbjct: 36 LPIIG-NILQLDVKDMSKSLTNFSKVYGPVFTVY----FGLKPIV 75


>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
          Length = 751

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 96  INWKQHLQIQSSQPSLNEAIQNL---AAIKSFKVKQTQRILYMAAETAK 141
           +NWK   +  SS    NE I+N+   A I S K   T+R+LY     AK
Sbjct: 28  VNWKA-CRWSSSGVIPNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAK 75


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,211,716
Number of Sequences: 37866
Number of extensions: 249304
Number of successful extensions: 639
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 21
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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