CLDND1 825

Name: CLDND1	Sequence: fasta or formatted (253aa)		NCBI GI: 11096340
Description: claudin domain containing 1 protein isoform a		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [253aa] claudin domain containing 1 protein isoform a alt prot [276aa] claudin domain containing 1 protein isoform b alt mRNA [253aa] claudin domain containing 1 protein isoform a alt mRNA [253aa] claudin domain containing 1 protein isoform a alt prot [158aa] claudin domain containing 1 protein isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 20 2 C cysteine 4.7 12 1 D aspartate 4.3 11 1 E glutamate 5.1 13 1 F phenylalanine 6.3 16 1 G glycine 5.5 14 1 H histidine 2.0 5 1 I isoleucine 5.9 15 1 K lysine 3.2 8 1 L leucine 11.5 29 2 M methionine 2.8 7 1 N asparagine 4.0 10 1 P proline 3.6 9 2 Q glutamine 2.0 5 1 R arginine 4.3 11 2 S serine 7.9 20 2 T threonine 6.3 16 1 V valine 5.5 14 2 W tryptophan 2.8 7 1 Y tyrosine 4.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin domain containing 1 protein isoform a CLDND1 1.000 claudin domain containing 1 protein isoform a CLDND1 1.000 claudin domain containing 1 protein isoform b CLDND1 1.000 claudin domain containing 1 protein isoform a CLDND1 1.000 claudin domain containing 1 protein isoform a CLDND1 0.597 claudin domain containing 1 protein isoform d TMEM114 0.063 PREDICTED: transmembrane protein 114 TMEM114 0.063 transmembrane protein 114 TMEM114 0.062 PREDICTED: transmembrane protein 114, partial [Homo... TMEM114 0.052 PREDICTED: transmembrane protein 114 CLDN3 0.028 claudin 3 LOC100131199 0.022 PREDICTED: hypothetical protein LOC100131199 0.022 PREDICTED: hypothetical protein LOC100131199 0.022 PREDICTED: hypothetical protein LOC100131199 0.022 PREDICTED: hypothetical protein OR11H6 0.022 olfactory receptor, family 11, subfamily H, member 6... CACNG5 0.022 voltage-dependent calcium channel gamma-5 subunit is... PMP22 0.020 peripheral myelin protein 22 PMP22 0.020 peripheral myelin protein 22 PMP22 0.020 peripheral myelin protein 22 CLDN19 0.018 claudin 19 isoform a CLDN19 0.018 claudin 19 isoform b EMP2 0.016 epithelial membrane protein 2 CACNG5 0.014 voltage-dependent calcium channel gamma-5 subunit iso... CLDN2 0.012 claudin 2 OR11H1 0.012 olfactory receptor, family 11, subfamily H, member 1... CACNG1 0.012 voltage-dependent calcium channel gamma-1 subunit [Ho... OR11H12 0.010 olfactory receptor, family 11, subfamily H, member 1... CLDN15 0.010 claudin 15 ERMN 0.008 ermin, ERM-like protein isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.