CLDND1 37445

Name: CLDND1	Sequence: fasta or formatted (276aa)		NCBI GI: 93588620
Description: claudin domain containing 1 protein isoform b		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [158aa] claudin domain containing 1 protein isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 22 2 C cysteine 4.3 12 1 D aspartate 4.3 12 1 E glutamate 5.1 14 1 F phenylalanine 5.8 16 1 G glycine 5.8 16 2 H histidine 1.8 5 1 I isoleucine 5.4 15 1 K lysine 3.3 9 1 L leucine 11.2 31 2 M methionine 2.9 8 1 N asparagine 4.3 12 1 P proline 3.3 9 2 Q glutamine 1.8 5 1 R arginine 4.7 13 2 S serine 9.1 25 2 T threonine 6.2 17 1 V valine 5.8 16 2 W tryptophan 2.9 8 1 Y tyrosine 4.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin domain containing 1 protein isoform b CLDND1 0.920 claudin domain containing 1 protein isoform a CLDND1 0.920 claudin domain containing 1 protein isoform a CLDND1 0.920 claudin domain containing 1 protein isoform a CLDND1 0.920 claudin domain containing 1 protein isoform a CLDND1 0.549 claudin domain containing 1 protein isoform d TMEM114 0.058 PREDICTED: transmembrane protein 114 TMEM114 0.058 transmembrane protein 114 TMEM114 0.057 PREDICTED: transmembrane protein 114, partial [Homo... TMEM114 0.047 PREDICTED: transmembrane protein 114 CLDN3 0.026 claudin 3 LOC100131199 0.020 PREDICTED: hypothetical protein LOC100131199 0.020 PREDICTED: hypothetical protein LOC100131199 0.020 PREDICTED: hypothetical protein LOC100131199 0.020 PREDICTED: hypothetical protein OR11H6 0.020 olfactory receptor, family 11, subfamily H, member 6... CACNG5 0.020 voltage-dependent calcium channel gamma-5 subunit is... PMP22 0.018 peripheral myelin protein 22 PMP22 0.018 peripheral myelin protein 22 PMP22 0.018 peripheral myelin protein 22 CLDN19 0.016 claudin 19 isoform a CLDN19 0.016 claudin 19 isoform b EMP2 0.015 epithelial membrane protein 2 CACNG5 0.013 voltage-dependent calcium channel gamma-5 subunit iso... CLDN2 0.011 claudin 2 OR11H1 0.011 olfactory receptor, family 11, subfamily H, member 1... CACNG1 0.011 voltage-dependent calcium channel gamma-1 subunit [Ho... OR11H12 0.009 olfactory receptor, family 11, subfamily H, member 1... CLDN15 0.009 claudin 15 ERMN 0.007 ermin, ERM-like protein isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.