CLDND1 37448

Name: CLDND1	Sequence: fasta or formatted (158aa)		NCBI GI: 93588657
Description: claudin domain containing 1 protein isoform d		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [276aa] claudin domain containing 1 protein isoform b alt prot [253aa] claudin domain containing 1 protein isoform a alt prot [253aa] claudin domain containing 1 protein isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 13 2 C cysteine 6.3 10 1 D aspartate 2.5 4 1 E glutamate 4.4 7 1 F phenylalanine 7.0 11 1 G glycine 7.6 12 1 H histidine 2.5 4 1 I isoleucine 4.4 7 1 K lysine 3.2 5 1 L leucine 15.2 24 2 M methionine 3.2 5 1 N asparagine 2.5 4 1 P proline 3.2 5 1 Q glutamine 2.5 4 1 R arginine 3.2 5 1 S serine 7.0 11 1 T threonine 5.7 9 1 V valine 6.3 10 2 W tryptophan 1.9 3 1 Y tyrosine 3.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 claudin domain containing 1 protein isoform d CLDND1 0.987 claudin domain containing 1 protein isoform a CLDND1 0.987 claudin domain containing 1 protein isoform b CLDND1 0.987 claudin domain containing 1 protein isoform a CLDND1 0.987 claudin domain containing 1 protein isoform a CLDND1 0.987 claudin domain containing 1 protein isoform a TMEM114 0.085 PREDICTED: transmembrane protein 114 TMEM114 0.085 PREDICTED: transmembrane protein 114, partial [Homo... TMEM114 0.085 PREDICTED: transmembrane protein 114 TMEM114 0.085 transmembrane protein 114 CLDN3 0.046 claudin 3 LOC100131199 0.036 PREDICTED: hypothetical protein LOC100131199 0.036 PREDICTED: hypothetical protein LOC100131199 0.036 PREDICTED: hypothetical protein LOC100131199 0.036 PREDICTED: hypothetical protein OR11H6 0.036 olfactory receptor, family 11, subfamily H, member 6... CACNG5 0.036 voltage-dependent calcium channel gamma-5 subunit is... PMP22 0.033 peripheral myelin protein 22 PMP22 0.033 peripheral myelin protein 22 PMP22 0.033 peripheral myelin protein 22 CLDN19 0.030 claudin 19 isoform a CLDN19 0.030 claudin 19 isoform b EMP2 0.026 epithelial membrane protein 2 CACNG5 0.023 voltage-dependent calcium channel gamma-5 subunit iso... CLDN2 0.020 claudin 2 OR11H1 0.020 olfactory receptor, family 11, subfamily H, member 1... CACNG1 0.020 voltage-dependent calcium channel gamma-1 subunit [Ho... OR11H12 0.016 olfactory receptor, family 11, subfamily H, member 1... CLDN15 0.016 claudin 15 VSIG4 0.010 V-set and immunoglobulin domain containing 4 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.