Guide to the Human Genome
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Search of human proteins with 110815842

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110815842 dysbindin (dystrobrevin binding protein 1) domain
containing 1 isoform 2 [Homo sapiens]
         (178 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110815842 dysbindin (dystrobrevin binding protein 1) domain c...   368   e-102
gi|110815838 dysbindin (dystrobrevin binding protein 1) domain c...   298   2e-81
gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens]    57   8e-09
gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens]    57   8e-09
gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens]    57   8e-09
gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sa...    42   4e-04
gi|115299762 SCF apoptosis response protein 1 isoform a [Homo sa...    42   4e-04
gi|115299754 SCF apoptosis response protein 1 isoform b [Homo sa...    42   4e-04
gi|115299750 SCF apoptosis response protein 1 isoform a [Homo sa...    42   4e-04
gi|115299760 SCF apoptosis response protein 1 isoform b [Homo sa...    42   4e-04
gi|115299745 SCF apoptosis response protein 1 isoform a [Homo sa...    42   4e-04
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]            33   0.17 
gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]            32   0.38 
gi|4826934 protein phosphatase 4, regulatory subunit 1 isoform b...    32   0.38 
gi|108936953 protein phosphatase 4, regulatory subunit 1 isoform...    32   0.38 
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]          31   0.49 
gi|239755567 PREDICTED: similar to protein phosphatase 1 regulat...    30   0.84 
gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo s...    30   0.84 
gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]                30   1.1  
gi|5803025 G protein-coupled receptor 75 [Homo sapiens]                30   1.1  
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...    29   1.9  
gi|31542493 D site of albumin promoter (albumin D-box) binding p...    29   2.4  
gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]           29   2.4  
gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]           29   2.4  
gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]           29   2.4  
gi|58082081 phosphoinositide-3-kinase, regulatory subunit 6 [Hom...    29   2.4  
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]          29   2.4  
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]            29   2.4  
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]           29   2.4  
gi|226437579 NAC alpha domain containing [Homo sapiens]                28   3.2  

>gi|110815842 dysbindin (dystrobrevin binding protein 1) domain
           containing 1 isoform 2 [Homo sapiens]
          Length = 178

 Score =  368 bits (945), Expect = e-102
 Identities = 178/178 (100%), Positives = 178/178 (100%)

Query: 1   MGETWKNICSTVRHGWWLRDHRMAGLPIPPEIVKEAEVPQAALGVPAQGTGDNGHTPVEE 60
           MGETWKNICSTVRHGWWLRDHRMAGLPIPPEIVKEAEVPQAALGVPAQGTGDNGHTPVEE
Sbjct: 1   MGETWKNICSTVRHGWWLRDHRMAGLPIPPEIVKEAEVPQAALGVPAQGTGDNGHTPVEE 60

Query: 61  EVGGIPVPAPGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENL 120
           EVGGIPVPAPGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENL
Sbjct: 61  EVGGIPVPAPGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENL 120

Query: 121 NTESPAGLHPLPRAGYLRSPSWTRTRAEQSHEKQPLGDPERQATVLDTFLTVERPQED 178
           NTESPAGLHPLPRAGYLRSPSWTRTRAEQSHEKQPLGDPERQATVLDTFLTVERPQED
Sbjct: 121 NTESPAGLHPLPRAGYLRSPSWTRTRAEQSHEKQPLGDPERQATVLDTFLTVERPQED 178


>gi|110815838 dysbindin (dystrobrevin binding protein 1) domain
           containing 1 isoform 1 [Homo sapiens]
          Length = 158

 Score =  298 bits (763), Expect = 2e-81
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 31  EIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLEV 90
           EIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLEV
Sbjct: 11  EIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLEV 70

Query: 91  HFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPSWTRTRAEQS 150
           HFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPSWTRTRAEQS
Sbjct: 71  HFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPSWTRTRAEQS 130

Query: 151 HEKQPLGDPERQATVLDTFLTVERPQED 178
           HEKQPLGDPERQATVLDTFLTVERPQED
Sbjct: 131 HEKQPLGDPERQATVLDTFLTVERPQED 158


>gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens]
          Length = 270

 Score = 57.0 bits (136), Expect = 8e-09
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 71  GLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPA 126
           G LQ+ ERR+P+ S+SS+EV+ D+L+  +L D+SDQE  +VF +S  E     SPA
Sbjct: 133 GYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPA 188


>gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens]
          Length = 303

 Score = 57.0 bits (136), Expect = 8e-09
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 71  GLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPA 126
           G LQ+ ERR+P+ S+SS+EV+ D+L+  +L D+SDQE  +VF +S  E     SPA
Sbjct: 214 GYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPA 269


>gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens]
          Length = 351

 Score = 57.0 bits (136), Expect = 8e-09
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 71  GLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPA 126
           G LQ+ ERR+P+ S+SS+EV+ D+L+  +L D+SDQE  +VF +S  E     SPA
Sbjct: 214 GYLQIAERREPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPA 269


>gi|115299756 SCF apoptosis response protein 1 isoform b [Homo
           sapiens]
          Length = 112

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|115299762 SCF apoptosis response protein 1 isoform a [Homo
           sapiens]
          Length = 161

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|115299754 SCF apoptosis response protein 1 isoform b [Homo
           sapiens]
          Length = 112

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|115299750 SCF apoptosis response protein 1 isoform a [Homo
           sapiens]
          Length = 161

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|115299760 SCF apoptosis response protein 1 isoform b [Homo
           sapiens]
          Length = 112

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|115299745 SCF apoptosis response protein 1 isoform a [Homo
           sapiens]
          Length = 161

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 73  LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
           L +  +R P+ S+SS+EV+ D L+  EL D+ D + A+VF   +D
Sbjct: 40  LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84


>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
          Length = 1444

 Score = 32.7 bits (73), Expect = 0.17
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 10   STVRHGWWLRDHRMAGLPIPPEIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPA 69
            S VR  + ++  +   +P+ P  ++  ++PQ    +P+Q +G+NG  P+E    G P   
Sbjct: 1184 SAVRTSFMVKMCQARAVPVIPPKIQYTQIPQP---LPSQSSGENGVQPLERSQEG-PSST 1239

Query: 70   PGLLQVTERRQPLSSVSS 87
             G  Q   +    SS+ S
Sbjct: 1240 SGTTQKPAKDDSPSSLES 1257


>gi|239750077 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 903

 Score = 31.6 bits (70), Expect = 0.38
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 19  RDHRMAGLPIPPEIVKEAE-VPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTE 77
           R  R+ G P+     +EA+  PQ  L  PA   G  G  P  + V   P P   L + + 
Sbjct: 787 RTSRILGFPLCAHSGREAQRTPQTTLRFPAWPQGGGGAAPGADSVSHKPEPRAILPEPSP 846

Query: 78  RRQPLSSVSSLEVHFDLLDLTELTDMSDQELA 109
           R  P     SL     L DL    D+ D+ ++
Sbjct: 847 RVGPCGGARSLLAGRGLEDL----DIGDRSVS 874


>gi|4826934 protein phosphatase 4, regulatory subunit 1 isoform b
           [Homo sapiens]
          Length = 933

 Score = 31.6 bits (70), Expect = 0.38
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 30  PEIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLE 89
           PEI  + E+ Q + G P+         P EE  G  PVP+   + +  R++    + +LE
Sbjct: 447 PEIDLDIELEQNSGGKPSP------EGPEEESEG--PVPSSPNITMATRKELEEMIENLE 498

Query: 90  VHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGL 128
            H D  D+    ++    L     D+ +E ++ E  + L
Sbjct: 499 PHIDDPDVKAQVEVLSAALRASSLDAHEETISIEKRSDL 537


>gi|108936953 protein phosphatase 4, regulatory subunit 1 isoform a
           [Homo sapiens]
          Length = 950

 Score = 31.6 bits (70), Expect = 0.38
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 30  PEIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLE 89
           PEI  + E+ Q + G P+         P EE  G  PVP+   + +  R++    + +LE
Sbjct: 464 PEIDLDIELEQNSGGKPSP------EGPEEESEG--PVPSSPNITMATRKELEEMIENLE 515

Query: 90  VHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGL 128
            H D  D+    ++    L     D+ +E ++ E  + L
Sbjct: 516 PHIDDPDVKAQVEVLSAALRASSLDAHEETISIEKRSDL 554


>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
          Length = 1133

 Score = 31.2 bits (69), Expect = 0.49
 Identities = 38/157 (24%), Positives = 52/157 (33%), Gaps = 10/157 (6%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 376 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQL 435

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                S     D     +      + L      S D+NL T S   L PLP +    +  
Sbjct: 436 TPLPPSAPPSAD-----DNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD 490

Query: 142 WTRTRAEQSHEKQPLGDPERQATVLDTFLTVERPQED 178
             +T AE+     P    +   T  +  LT   P  D
Sbjct: 491 NIKTPAERLRGPLPPSADDNLKTPSERQLTALPPSAD 527



 Score = 28.1 bits (61), Expect = 4.1
 Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 10/128 (7%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 873 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQL 932

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                S     D     +      + L      S D+NL T S   L PLP +    +  
Sbjct: 933 TPLPPSAPPSAD-----DNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD 987

Query: 142 WTRTRAEQ 149
             +T AE+
Sbjct: 988 NIKTPAER 995



 Score = 27.7 bits (60), Expect = 5.4
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 28/118 (23%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 460 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQ- 518

Query: 82  LSSVSSLEVHFDLLDLTELTDMSD-------QELAEVFADSDDENLNTESPAGLHPLP 132
                          LT L   +D       + L      S D+NL T S   L PLP
Sbjct: 519 ---------------LTALPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLP 561



 Score = 27.3 bits (59), Expect = 7.1
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 12/122 (9%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTGD-NGHTPVEEEVGGIPVPAPGLLQVTER----RQP 81
           P+PP      + P   +  P   + D N  TP E  +  +P  A   L+          P
Sbjct: 273 PLPPSADDNLKTPPECVLTPLPPSADDNLKTPPECVLTPLPPSADDNLKTPPECLLTPLP 332

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAG--YLRS 139
            S+  +L+   + L    LT +    L      +DD NL T +   LHPLP +    L++
Sbjct: 333 PSADDNLKTPPECL----LTPLPPSALPSAPPSADD-NLKTRAECLLHPLPPSADDNLKT 387

Query: 140 PS 141
           PS
Sbjct: 388 PS 389


>gi|239755567 PREDICTED: similar to protein phosphatase 1 regulatory
           subunit 14B [Homo sapiens]
          Length = 147

 Score = 30.4 bits (67), Expect = 0.84
 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 16/98 (16%)

Query: 41  AALGVPAQGTGDNGHTP----------VEEEVGGI----PVPAPGLLQVTERRQPLSSVS 86
           AAL  PA G G  G  P            E  GG     PV   G + V   R+ L    
Sbjct: 10  AALAAPAPGPGSGGPGPRVYFQSPPGAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRL 69

Query: 87  SLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTES 124
           +LE  + L  LT L D  ++E+ E+  D  DE L+ ES
Sbjct: 70  NLE-EWILEQLTRLYDCQEEEIPELEIDV-DELLDMES 105


>gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo
           sapiens]
          Length = 147

 Score = 30.4 bits (67), Expect = 0.84
 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 16/98 (16%)

Query: 41  AALGVPAQGTGDNGHTP----------VEEEVGGI----PVPAPGLLQVTERRQPLSSVS 86
           AAL  PA G G  G  P            E  GG     PV   G + V   R+ L    
Sbjct: 10  AALAAPAPGPGSGGPGPRVYFQSPPGAAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRL 69

Query: 87  SLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTES 124
           +LE  + L  LT L D  ++E+ E+  D  DE L+ ES
Sbjct: 70  NLE-EWILEQLTRLYDCQEEEIPELEIDV-DELLDMES 105


>gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]
          Length = 508

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 52  DNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVS---SLEVHFDLL 95
           DNGH P++ +V  IPV  P    V   R P +  +    LE+H + L
Sbjct: 278 DNGHVPIQSKVVNIPVRIPVSRPVLTLRSPGAQAAVGDLLELHCEAL 324


>gi|5803025 G protein-coupled receptor 75 [Homo sapiens]
          Length = 540

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 29  PPEIVKEAEVPQAALGVPAQGTGD 52
           PP I  +A  PQ  +GVP QG GD
Sbjct: 239 PPVITVDASRPQPFMGVPVQGGGD 262


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
           family member 2 [Homo sapiens]
          Length = 1122

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 422 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQL 481

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                S     D     +      + L      S D+NL T S   L PLP +    +  
Sbjct: 482 TPLPPSAPPSAD-----DNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD 536

Query: 142 WTRTRAEQSHEKQPL 156
             +T AE  H + PL
Sbjct: 537 NIKTTAE--HLRGPL 549



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 380 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQL 439

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                S     D     +      + L      S D+NL T S   L PLP +    +  
Sbjct: 440 TPLPPSAPPSAD-----DNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD 494

Query: 142 WTRTRAEQSHEKQPL 156
             +T AE  H + PL
Sbjct: 495 NIKTPAE--HLRGPL 507



 Score = 28.9 bits (63), Expect = 2.4
 Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 10/128 (7%)

Query: 27   PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
            P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 891  PLPPSADDNLKTPSKRQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQL 950

Query: 82   LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                 S     D     +      + L      S D+NL T S   L PLP +    +  
Sbjct: 951  TPLPPSAPPSAD-----DNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPTSADD 1005

Query: 142  WTRTRAEQ 149
              +T AE+
Sbjct: 1006 NIKTPAER 1013



 Score = 28.5 bits (62), Expect = 3.2
 Identities = 32/127 (25%), Positives = 44/127 (34%), Gaps = 10/127 (7%)

Query: 27  PIPPEIVKEAEVPQAALGVPAQGTG-----DNGHTPVEEEVGGIPVPAPGLLQVTERRQP 81
           P+PP      + P      P   +      DN  TP E   G +P  A   L+    RQ 
Sbjct: 464 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQL 523

Query: 82  LSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPS 141
                S     D     +    + + L      S D+NL T S   L PLP +    +  
Sbjct: 524 TPLPPSAPPSAD-----DNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADD 578

Query: 142 WTRTRAE 148
             +T AE
Sbjct: 579 NIKTPAE 585


>gi|31542493 D site of albumin promoter (albumin D-box) binding
           protein [Homo sapiens]
          Length = 325

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%)

Query: 34  KEAEVPQAALGVPAQGTGDNGHTPVEEEVGGI-------PVPAPGLLQ--VTERRQPLSS 84
           ++A +P A    P   T      P    VGG        PVPAPGLL   + ER  P   
Sbjct: 54  RKAALPAATTPGPGLETAGPADAPAGAVVGGGSPRGRPGPVPAPGLLAPLLWERTLPFGD 113

Query: 85  VSSLEVHFDLLD 96
           V  +++   LL+
Sbjct: 114 VEYVDLDAFLLE 125


>gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 28  IPPEIVKEAEVPQA-ALGVP----AQGTGDNGHTPVEEEVGGIPVPAPGL 72
           +PP+    A VP A A G P    A G G +   P+ +  GG+  P PG+
Sbjct: 230 LPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGV 279


>gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 28  IPPEIVKEAEVPQA-ALGVP----AQGTGDNGHTPVEEEVGGIPVPAPGL 72
           +PP+    A VP A A G P    A G G +   P+ +  GG+  P PG+
Sbjct: 230 LPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGV 279


>gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 28  IPPEIVKEAEVPQA-ALGVP----AQGTGDNGHTPVEEEVGGIPVPAPGL 72
           +PP+    A VP A A G P    A G G +   P+ +  GG+  P PG+
Sbjct: 230 LPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGV 279


>gi|58082081 phosphoinositide-3-kinase, regulatory subunit 6 [Homo
           sapiens]
          Length = 754

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 51  GDNGHTPVEEEVGGIPVPAPGL---LQVTERR---------QPLSSVSSLEVHFDLLDLT 98
           G  G   V+E    IP+P+P +   L   E +         +P S +  L    ++LDL 
Sbjct: 264 GRCGGDLVQERPPSIPLPSPYITFHLWTGEEQLWKELVLFLRPRSQLR-LSADLEVLDLQ 322

Query: 99  ELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAG 135
            L    D+ELA V   S D  +  + P G   LP  G
Sbjct: 323 GLRP--DRELARVSVLSTDSGIERDLPTGADELPAPG 357


>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
          Length = 494

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 34  KEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPL 82
           + A++P+    +P  G    G+ PV   +GG+  P PG+ Q    R P+
Sbjct: 391 RRAQLPKYQRNLPRPGQAPIGNPPVGP-IGGMMPPQPGIPQQQGMRPPM 438


>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
          Length = 478

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 34  KEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPL 82
           + A++P+    +P  G    G+ PV   +GG+  P PG+ Q    R P+
Sbjct: 375 RRAQLPKYQRNLPRPGQAPIGNPPVGP-IGGMMPPQPGIPQQQGMRPPM 422


>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
          Length = 463

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 34  KEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPL 82
           + A++P+    +P  G    G+ PV   +GG+  P PG+ Q    R P+
Sbjct: 360 RRAQLPKYQRNLPRPGQAPIGNPPVGP-IGGMMPPQPGIPQQQGMRPPM 407


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 26/123 (21%)

Query: 56  TPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADS 115
           +P EEE   +  P PG     E  +  +S S L+   DL  +TE  D       E FA  
Sbjct: 330 SPEEEEEEAVADPDPGGDLAGEGEEDSTSASFLQSLSDL-SITEGMD-------EAFAFR 381

Query: 116 DDENLNTESPAGLHPLPRAGYLRSPSWTRTRAEQSHEKQPLGDPERQATVLDTFLTVERP 175
           DD +  +                S S + + AE   E+   G+P  QAT+L    +V++ 
Sbjct: 382 DDTSAAS----------------SDSDSASYAEADDERLYSGEPHAQATLLQD--SVQKT 423

Query: 176 QED 178
           +E+
Sbjct: 424 EEE 426


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,410,810
Number of Sequences: 37866
Number of extensions: 439969
Number of successful extensions: 1084
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1047
Number of HSP's gapped (non-prelim): 94
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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