LOC285697 7711

Name: LOC285697	Sequence: fasta or formatted (198aa)		NCBI GI: 169168506
Description: PREDICTED: similar to hCG1807616		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt mRNA [198aa] PREDICTED: hypothetical protein LOC285697 alt mRNA [198aa] PREDICTED: similar to hCG1807616
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 21 2 C cysteine 1.0 2 1 D aspartate 5.1 10 1 E glutamate 11.1 22 2 F phenylalanine 2.5 5 1 G glycine 7.1 14 1 H histidine 0.5 1 1 I isoleucine 2.5 5 1 K lysine 8.1 16 2 L leucine 8.1 16 2 M methionine 5.6 11 1 N asparagine 2.5 5 1 P proline 6.1 12 2 Q glutamine 4.0 8 1 R arginine 6.6 13 2 S serine 6.6 13 2 T threonine 4.5 9 2 V valine 6.1 12 2 W tryptophan 0.5 1 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1807616 LOC285697 1.000 PREDICTED: similar to hCG1807616 LOC285697 1.000 PREDICTED: hypothetical protein LOC285697 LOC642127 0.910 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.910 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.910 PREDICTED: hypothetical protein XP_002342536 LOC391766 0.896 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.896 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391764 0.890 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.890 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.888 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391766 0.885 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391763 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.882 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.882 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.882 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.879 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.879 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646103 0.871 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.811 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.811 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.811 PREDICTED: similar to TBP-associated factor 11 [Homo... TAF11 0.564 TBP-associated factor 11 EPS8L1 0.036 epidermal growth factor receptor pathway substrate ... LOC340096 0.025 PREDICTED: similar to hCG1642908 LOC340096 0.025 PREDICTED: similar to hCG1642908 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.