TAF11 31546

Name: TAF11	Sequence: fasta or formatted (211aa)		NCBI GI: 5032151
Description: TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 16 3 C cysteine 0.5 1 1 D aspartate 8.5 18 2 E glutamate 12.3 26 2 F phenylalanine 2.4 5 2 G glycine 6.2 13 2 H histidine 1.4 3 1 I isoleucine 5.7 12 2 K lysine 10.4 22 2 L leucine 5.7 12 2 M methionine 2.8 6 1 N asparagine 1.9 4 1 P proline 4.7 10 2 Q glutamine 4.3 9 1 R arginine 3.8 8 2 S serine 8.5 18 2 T threonine 4.7 10 2 V valine 7.1 15 2 W tryptophan 0.5 1 1 Y tyrosine 0.9 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 11 LOC285697 0.530 PREDICTED: similar to hCG1807616 LOC285697 0.530 PREDICTED: similar to hCG1807616 LOC285697 0.530 PREDICTED: hypothetical protein LOC285697 LOC391766 0.504 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.504 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391764 0.501 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.501 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.499 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.496 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.496 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.496 PREDICTED: hypothetical protein XP_002342536 LOC391766 0.494 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.494 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391763 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.491 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.491 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.491 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.488 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.481 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.476 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.476 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.476 PREDICTED: similar to TBP-associated factor 11 [Homo... RTF1 0.036 Paf1/RNA polymerase II complex component MAP7D2 0.033 MAP7 domain containing 2 CEP250 0.033 centrosomal protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.