LOC391766 36750

Name: LOC391766	Sequence: fasta or formatted (198aa)		NCBI GI: 88987386
Description: PREDICTED: similar to TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [198aa] PREDICTED: similar to TBP-associated factor 11 alt mRNA [198aa] PREDICTED: similar to TBP-associated factor 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 20 2 C cysteine 1.0 2 1 D aspartate 4.5 9 1 E glutamate 11.6 23 2 F phenylalanine 2.0 4 1 G glycine 7.1 14 1 H histidine 1.5 3 1 I isoleucine 2.5 5 1 K lysine 7.1 14 2 L leucine 7.6 15 2 M methionine 5.6 11 1 N asparagine 2.0 4 1 P proline 6.1 12 2 Q glutamine 2.5 5 1 R arginine 9.1 18 2 S serine 7.6 15 2 T threonine 5.1 10 2 V valine 5.6 11 2 W tryptophan 0.5 1 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.984 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391763 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.948 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.948 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.948 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.946 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.946 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646103 0.937 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC285697 0.891 PREDICTED: similar to hCG1807616 LOC285697 0.891 PREDICTED: similar to hCG1807616 LOC285697 0.891 PREDICTED: hypothetical protein LOC285697 LOC642127 0.872 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.872 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.872 PREDICTED: hypothetical protein XP_002342536 LOC391764 0.864 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.864 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.861 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.793 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.793 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.793 PREDICTED: similar to TBP-associated factor 11 [Homo... TAF11 0.534 TBP-associated factor 11 AP3B1 0.030 adaptor-related protein complex 3, beta 1 subunit [H... CALD1 0.025 caldesmon 1 isoform 5 CALD1 0.025 caldesmon 1 isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.