LOC340096 7712

Name: LOC340096	Sequence: fasta or formatted (193aa)		NCBI GI: 169168508
Description: PREDICTED: similar to hCG1642908		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt mRNA [193aa] PREDICTED: similar to hCG1642908 alt prot [147aa] PREDICTED: similar to hCG1642908
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.5 28 2 C cysteine 1.6 3 1 D aspartate 2.1 4 1 E glutamate 4.7 9 2 F phenylalanine 2.1 4 1 G glycine 5.2 10 2 H histidine 3.1 6 2 I isoleucine 3.1 6 1 K lysine 7.3 14 2 L leucine 8.8 17 3 M methionine 3.6 7 1 N asparagine 1.6 3 1 P proline 6.7 13 1 Q glutamine 6.2 12 1 R arginine 8.3 16 1 S serine 4.1 8 1 T threonine 6.2 12 1 V valine 6.7 13 2 W tryptophan 2.6 5 2 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1642908 LOC340096 1.000 PREDICTED: similar to hCG1642908 LOC340096 0.469 PREDICTED: similar to hCG1642908 LOC391769 0.458 PREDICTED: similar to HIStone family member (his-72... LOC391769 0.458 PREDICTED: similar to HIStone family member (his-72)... LOC391769 0.458 PREDICTED: similar to HIStone family member (his-72)... H3F3B 0.379 H3 histone, family 3B H3F3A 0.379 H3 histone, family 3A HIST2H3A 0.365 histone cluster 2, H3a HIST2H3C 0.365 histone cluster 2, H3c HIST2H3D 0.365 histone cluster 2, H3d HIST1H3E 0.360 histone cluster 1, H3e HIST1H3H 0.360 histone cluster 1, H3h HIST1H3I 0.360 histone cluster 1, H3i HIST1H3A 0.360 histone cluster 1, H3a HIST1H3F 0.360 histone cluster 1, H3f HIST1H3D 0.360 histone cluster 1, H3d HIST1H3B 0.360 histone cluster 1, H3b HIST1H3J 0.360 histone cluster 1, H3j HIST1H3C 0.360 histone cluster 1, H3c HIST1H3G 0.360 H3 histone family, member H HIST3H3 0.349 histone cluster 3, H3 LOC440093 0.346 histone H3-like LOC644950 0.286 PREDICTED: similar to histone H3.3B CENPA 0.101 centromere protein A isoform a CENPA 0.054 centromere protein A isoform b LOC285697 0.025 PREDICTED: similar to hCG1807616 LOC285697 0.025 PREDICTED: similar to hCG1807616 LOC285697 0.025 PREDICTED: hypothetical protein LOC285697 LOC391767 0.022 PREDICTED: similar to TBP-associated factor 11 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.