LOC391767 27640

Name: LOC391767	Sequence: fasta or formatted (197aa)		NCBI GI: 41147168
Description: PREDICTED: similar to TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt mRNA [197aa] PREDICTED: similar to TBP-associated factor 11 alt mRNA [197aa] PREDICTED: similar to TBP-associated factor 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 21 2 C cysteine 2.5 5 1 D aspartate 4.6 9 1 E glutamate 11.7 23 2 F phenylalanine 2.5 5 1 G glycine 6.1 12 1 H histidine 0.0 0 0 I isoleucine 2.5 5 1 K lysine 6.1 12 2 L leucine 8.1 16 2 M methionine 6.6 13 1 N asparagine 3.0 6 2 P proline 6.6 13 2 Q glutamine 4.1 8 1 R arginine 6.6 13 1 S serine 5.1 10 1 T threonine 4.1 8 2 V valine 7.1 14 2 W tryptophan 1.0 2 1 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC285697 0.802 PREDICTED: similar to hCG1807616 LOC285697 0.802 PREDICTED: similar to hCG1807616 LOC285697 0.802 PREDICTED: hypothetical protein LOC285697 LOC642127 0.789 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.789 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.789 PREDICTED: hypothetical protein XP_002342536 LOC391766 0.789 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.789 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391764 0.780 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.780 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391766 0.778 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.778 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391763 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.764 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.764 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.762 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.762 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646103 0.753 PREDICTED: similar to TBP-associated factor 11 [Hom... TAF11 0.501 TBP-associated factor 11 FYCO1 0.030 FYVE and coiled-coil domain containing 1 LOC340096 0.022 PREDICTED: similar to hCG1642908 LOC340096 0.022 PREDICTED: similar to hCG1642908 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.