LOC646103 1161

Name: LOC646103	Sequence: fasta or formatted (198aa)		NCBI GI: 113416481
Description: PREDICTED: similar to TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [198aa] PREDICTED: similar to TBP-associated factor 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 22 2 C cysteine 1.5 3 1 D aspartate 4.5 9 1 E glutamate 11.1 22 2 F phenylalanine 2.0 4 1 G glycine 7.6 15 1 H histidine 1.0 2 1 I isoleucine 2.5 5 1 K lysine 7.1 14 2 L leucine 8.6 17 2 M methionine 5.1 10 1 N asparagine 2.0 4 1 P proline 5.6 11 2 Q glutamine 2.5 5 1 R arginine 8.6 17 2 S serine 7.6 15 2 T threonine 5.1 10 2 V valine 5.6 11 2 W tryptophan 0.5 1 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391763 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.995 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.995 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.995 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.989 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.989 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.945 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.945 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.942 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC285697 0.874 PREDICTED: similar to hCG1807616 LOC285697 0.874 PREDICTED: similar to hCG1807616 LOC285697 0.874 PREDICTED: hypothetical protein LOC285697 LOC642127 0.857 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.857 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.857 PREDICTED: hypothetical protein XP_002342536 LOC391764 0.846 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.846 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.846 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.764 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.764 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.764 PREDICTED: similar to TBP-associated factor 11 [Homo... TAF11 0.514 TBP-associated factor 11 EPS8L1 0.033 epidermal growth factor receptor pathway substrate ... EPS8L1 0.022 epidermal growth factor receptor pathway substrate ... MAP7 0.022 microtubule-associated protein 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.