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Search of human proteins with 169168103
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168103 PREDICTED: hypothetical protein [Homo sapiens] 781 0.0
gi|169168282 PREDICTED: hypothetical protein [Homo sapiens] 679 0.0
gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] 555 e-158
gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens] 35 0.083
gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens] 35 0.083
gi|68989256 ras inhibitor RIN1 [Homo sapiens] 33 0.54
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein... 32 0.70
gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 32 1.2
gi|167004110 methyltransferase-like protein 1 isoform c [Homo sa... 31 1.6
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 31 2.0
gi|91822911 JAZF zinc finger 1 [Homo sapiens] 30 2.7
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 30 2.7
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 30 2.7
gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho... 30 2.7
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho... 30 2.7
gi|27886524 nuclear factor of activated T-cells 5 isoform a [Hom... 30 2.7
gi|5454030 RAS-related on chromosome 22 isoform a [Homo sapiens] 30 2.7
gi|89191830 hypothetical protein LOC388969 [Homo sapiens] 30 3.5
gi|50409939 aftiphilin protein isoform a [Homo sapiens] 30 4.5
gi|170932501 triggering receptor expressed on myeloid cells-like... 30 4.5
gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens] 30 4.5
gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.9
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.9
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 29 5.9
gi|145386551 SH3 domain and tetratricopeptide repeats 1 [Homo sa... 29 5.9
gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens] 29 7.7
>gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 781 bits (2017), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARL 60
MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARL
Sbjct: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARL 60
Query: 61 PACPLLSVSVSRVNEVIKPGEQCAVKKLKFLVLIPTSIILQPWTSHPSDWRGATEERQLK 120
PACPLLSVSVSRVNEVIKPGEQCAVKKLKFLVLIPTSIILQPWTSHPSDWRGATEERQLK
Sbjct: 61 PACPLLSVSVSRVNEVIKPGEQCAVKKLKFLVLIPTSIILQPWTSHPSDWRGATEERQLK 120
Query: 121 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 180
ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG
Sbjct: 121 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 180
Query: 181 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 240
IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL
Sbjct: 181 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 240
Query: 241 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 300
SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL
Sbjct: 241 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 300
Query: 301 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 360
PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT
Sbjct: 301 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 360
Query: 361 AGRLSCSSPA 370
AGRLSCSSPA
Sbjct: 361 AGRLSCSSPA 370
>gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
Length = 328
Score = 679 bits (1753), Expect = 0.0
Identities = 328/370 (88%), Positives = 328/370 (88%), Gaps = 42/370 (11%)
Query: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARL 60
MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAH
Sbjct: 1 MIGCSLECGPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAFTPAAH------------- 47
Query: 61 PACPLLSVSVSRVNEVIKPGEQCAVKKLKFLVLIPTSIILQPWTSHPSDWRGATEERQLK 120
FLVLIPTSIILQPWTSHPSDWRGATEERQLK
Sbjct: 48 -----------------------------FLVLIPTSIILQPWTSHPSDWRGATEERQLK 78
Query: 121 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 180
ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG
Sbjct: 79 ASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLG 138
Query: 181 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 240
IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL
Sbjct: 139 IQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHL 198
Query: 241 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 300
SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL
Sbjct: 199 SHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLAL 258
Query: 301 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 360
PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT
Sbjct: 259 PGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDT 318
Query: 361 AGRLSCSSPA 370
AGRLSCSSPA
Sbjct: 319 AGRLSCSSPA 328
>gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 555 bits (1431), Expect = e-158
Identities = 262/263 (99%), Positives = 262/263 (99%)
Query: 108 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 167
SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY
Sbjct: 28 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87
Query: 168 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 227
WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT
Sbjct: 88 WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147
Query: 228 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 287
SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY
Sbjct: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207
Query: 288 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 347
YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG
Sbjct: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267
Query: 348 PWSKVSLVGSTDTAGRLSCSSPA 370
PWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 268 PWSKVSLVGSTDTAGRLSCSSPA 290
>gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]
Length = 409
Score = 35.4 bits (80), Expect = 0.083
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 172 LGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 231
L + VW QG +F+Q C GAP + L E+D+PG S+ QAT
Sbjct: 327 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 385
Query: 232 KKPLSS 237
+ SS
Sbjct: 386 SEDFSS 391
>gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.083
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 172 LGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 231
L + VW QG +F+Q C GAP + L E+D+PG S+ QAT
Sbjct: 328 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 386
Query: 232 KKPLSS 237
+ SS
Sbjct: 387 SEDFSS 392
>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
Length = 783
Score = 32.7 bits (73), Expect = 0.54
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 206 PTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEG 265
P PSL E D P SS+++ P +S HL R + FC+ LL E
Sbjct: 306 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCS---LLAPER 362
Query: 266 LVLQPKTPLQEDSELLSG 283
V + L +D +G
Sbjct: 363 QVGRAAAALMQDRHTAAG 380
>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
[Homo sapiens]
Length = 480
Score = 32.3 bits (72), Expect = 0.70
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 188 GTSFFSQMCQNCDAESGAPTS-PSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQV 246
G+ FFS CQNC+A +G + SL+ D+ P Q +S R K L+S H +
Sbjct: 298 GSEFFS--CQNCEAVAGCSSGLDSLVPGDEDKPYKCQLCRSSFRYKGNLASHRTVHTGE- 354
Query: 247 ALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 287
P+ C+ C G L+ S + SG PY
Sbjct: 355 ----KPYHCSI-C-----GARFNRPANLKTHSRIHSGEKPY 385
>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
Length = 433
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 186 TDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQ 245
TD + +Q QN SG P P + + +A + R +K S L L R +
Sbjct: 234 TDAAAAKTQFLQNMQTASGGP---------QPRLSAVEVEAEAGRLRKACSLLRLRMREE 284
Query: 246 VALEYLPFFCTYGCLLEEEGL 266
++ + + Y CLL EGL
Sbjct: 285 LSAAPMDWMQEYRCLLTLEGL 305
>gi|167004110 methyltransferase-like protein 1 isoform c [Homo
sapiens]
Length = 155
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 219 PLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQED 277
PL+ Q +DKK RAQ +E+ C YG LL ++ ++ P+ Q D
Sbjct: 56 PLTQNQSHDDPKDKK-------EKRAQAQVEFADIGCGYGGLLADKDVLPLPRPTFQAD 107
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 30.8 bits (68), Expect = 2.0
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 200 DAESGAPT-SPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPF 253
D E G PT SPSL E D PL S+++ S + P S L + + P+
Sbjct: 814 DPEVGTPTYSPSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPY 868
>gi|91822911 JAZF zinc finger 1 [Homo sapiens]
Length = 243
Score = 30.4 bits (67), Expect = 2.7
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 190 SFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALE 249
SFFS C+ PT L+E + + + D + L L VAL
Sbjct: 8 SFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDT--------DPRVLEKQELQQPTYVALS 59
Query: 250 YLPFFCTYGCLLEEEGL--VLQPKTPLQEDSELLSG 283
Y+ F T E+E L +QPK L S + G
Sbjct: 60 YINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRG 95
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 GGTATARLPACPLLSVSVSRVNEVIKPG-EQCAVKKLKFLVLI------PTSIILQPWTS 105
G T T + P+ P+L + V E++K C+VK + + LI T +I Q S
Sbjct: 348 GSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVS 407
Query: 106 HPSDWRGATE 115
+ W+ E
Sbjct: 408 DENSWKSEAE 417
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 GGTATARLPACPLLSVSVSRVNEVIKPG-EQCAVKKLKFLVLI------PTSIILQPWTS 105
G T T + P+ P+L + V E++K C+VK + + LI T +I Q S
Sbjct: 424 GSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVS 483
Query: 106 HPSDWRGATE 115
+ W+ E
Sbjct: 484 DENSWKSEAE 493
>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
sapiens]
Length = 1548
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 GGTATARLPACPLLSVSVSRVNEVIKPG-EQCAVKKLKFLVLI------PTSIILQPWTS 105
G T T + P+ P+L + V E++K C+VK + + LI T +I Q S
Sbjct: 442 GSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVS 501
Query: 106 HPSDWRGATE 115
+ W+ E
Sbjct: 502 DENSWKSEAE 511
>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
sapiens]
Length = 1549
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 GGTATARLPACPLLSVSVSRVNEVIKPG-EQCAVKKLKFLVLI------PTSIILQPWTS 105
G T T + P+ P+L + V E++K C+VK + + LI T +I Q S
Sbjct: 442 GSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVS 501
Query: 106 HPSDWRGATE 115
+ W+ E
Sbjct: 502 DENSWKSEAE 511
>gi|27886524 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 53 GGTATARLPACPLLSVSVSRVNEVIKPG-EQCAVKKLKFLVLI------PTSIILQPWTS 105
G T T + P+ P+L + V E++K C+VK + + LI T +I Q S
Sbjct: 348 GSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVS 407
Query: 106 HPSDWRGATE 115
+ W+ E
Sbjct: 408 DENSWKSEAE 417
>gi|5454030 RAS-related on chromosome 22 isoform a [Homo sapiens]
Length = 203
Score = 30.4 bits (67), Expect = 2.7
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 9 GPRAPGGGDDFWGTAN----QDVCSPELTWKLSGPSAFTPAAHVHQAAGGTATARLPACP 64
GP + GG + W A QD + L + + P +F + Q T A P P
Sbjct: 64 GPGSSPGGPEEWPDAKDWSLQDTDAFVLVYDICSPDSFDYVKALRQRIAETRPAGAPEAP 123
Query: 65 LLSVSVSRVNEVIKPGEQCAVKKL 88
+L V R + ++ G + A+ L
Sbjct: 124 ILVVGNKRDRQRLRFGPRRALAAL 147
>gi|89191830 hypothetical protein LOC388969 [Homo sapiens]
Length = 166
Score = 30.0 bits (66), Expect = 3.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 196 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 247
C +A+SG TS + + DDPG +S + A + D +L L + ++A
Sbjct: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160
>gi|50409939 aftiphilin protein isoform a [Homo sapiens]
Length = 936
Score = 29.6 bits (65), Expect = 4.5
Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 13/167 (7%)
Query: 120 KASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWL 179
K + G+ +SP ++ + Q L PV + W + L L G+ L+ L
Sbjct: 775 KIASIGQTATMSPDMNTCTSDQFQE--SLPPVQFDWSSSGLTNPLDASG----GSTLLNL 828
Query: 180 GIQGAVTDGTSFFSQMCQNCDAE------SGAPTSPSLLEEDDP-GPLSSQQQATSSRDK 232
G V D +S S D E S S S L+ D L S + TS+ +
Sbjct: 829 DFFGPVDDSSSSSSTTIPGVDPELYELTTSKLEISTSSLKVTDAFARLMSTVEKTSTSTR 888
Query: 233 KPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSE 279
KP HLS A + LP + L P T QE ++
Sbjct: 889 KPKREEHLSEEAIKVIAGLPDLTFMHAKVLMFPATLTPSTSSQEKAD 935
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 29.6 bits (65), Expect = 4.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 119 LKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGN 157
LK D GR WC+ T SG+ +P + ++P P T N
Sbjct: 95 LKLQDSGRYWCMRNT-SGILYPLMGFQLDVSPAPQTERN 132
>gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens]
Length = 1056
Score = 29.6 bits (65), Expect = 4.5
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 95 PTSIILQPWTS-HPSDW-RGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVP 152
P + +QPW S P W RG Q+ + + RD G HP+E P L P P
Sbjct: 383 PAAHPVQPWASLSPEGWQRGGPFWPQVTLNSQDRD-----EREG-GHPQESLPCTLAPCP 436
Query: 153 W 153
W
Sbjct: 437 W 437
>gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 3 preproprotein [Homo sapiens]
Length = 1340
Score = 29.3 bits (64), Expect = 5.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 123 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 162
D G + L GL P Q L P P W SLGP
Sbjct: 953 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 992
>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 2 preproprotein [Homo sapiens]
Length = 1371
Score = 29.3 bits (64), Expect = 5.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 123 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 162
D G + L GL P Q L P P W SLGP
Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023
>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
13 isoform 1 preproprotein [Homo sapiens]
Length = 1427
Score = 29.3 bits (64), Expect = 5.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 123 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 162
D G + L GL P Q L P P W SLGP
Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023
>gi|145386551 SH3 domain and tetratricopeptide repeats 1 [Homo
sapiens]
Length = 1336
Score = 29.3 bits (64), Expect = 5.9
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 12/86 (13%)
Query: 9 GPRAPGGGDDFWGTANQDVCSPELTWKLSGPSAF--------TPAAHVHQAAGGTATARL 60
GP P GG V P ++W+ +GP P A V A GT ++
Sbjct: 18 GPVGPSGGGSTRDQVRTVVMRPSVSWEKAGPEEAKAPVRGDEAPPARVAGPAAGTPPCQM 77
Query: 61 PACP----LLSVSVSRVNEVIKPGEQ 82
P L ++V R + + PG Q
Sbjct: 78 GVYPTDLTLQLLAVRRKSRLRDPGLQ 103
>gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]
Length = 574
Score = 28.9 bits (63), Expect = 7.7
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 261 LEEEGLVLQPKTPLQEDSELLSGFFP 286
+EE+GL PK+PL DS LLS P
Sbjct: 221 MEEDGLRWTPKSPLDPDSGLLSCTLP 246
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,781,252
Number of Sequences: 37866
Number of extensions: 913784
Number of successful extensions: 2515
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2500
Number of HSP's gapped (non-prelim): 30
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.