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Search of human proteins with 169167899
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]
(260 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167813 PREDICTED: hypothetical protein [Homo sapiens] 554 e-158
gi|169167899 PREDICTED: hypothetical protein [Homo sapiens] 554 e-158
gi|169167609 PREDICTED: hypothetical protein [Homo sapiens] 551 e-157
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 47 2e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 45 5e-05
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens] 42 4e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 41 0.001
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 41 0.001
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|62988361 absent in melanoma 1 [Homo sapiens] 41 0.001
gi|115511030 hypothetical protein LOC115004 [Homo sapiens] 41 0.001
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|84570137 homeobox B3 [Homo sapiens] 40 0.003
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 39 0.003
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.003
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 39 0.006
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 39 0.006
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 38 0.008
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 38 0.010
>gi|169167813 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 554 bits (1428), Expect = e-158
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
Query: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
Query: 241 GVGACHSQLSCAAPPRGKYW 260
GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260
>gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 554 bits (1428), Expect = e-158
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
Query: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
Query: 241 GVGACHSQLSCAAPPRGKYW 260
GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260
>gi|169167609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 551 bits (1420), Expect = e-157
Identities = 259/260 (99%), Positives = 259/260 (99%)
Query: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1 MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
Query: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61 PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
RHRHCSS CCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSCCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
Query: 241 GVGACHSQLSCAAPPRGKYW 260
GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 46.6 bits (109), Expect = 2e-05
Identities = 63/218 (28%), Positives = 79/218 (36%), Gaps = 49/218 (22%)
Query: 2 RTGGCHSTD--PSSIGANVRLRPAQTRKRP--RALRAVSTRTARPPQSLQSRCRGFFPAQ 57
R G HS PSS VR + A P R + S R+A Q R G +
Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386
Query: 58 QQQPRQRKIKPDS---------RSPTPVPPSFASDQRARVRVCAGA-NGAGASGPRGPSP 107
+++ R+R+ S R P P PP +S +R R + + +G GA GP GP P
Sbjct: 387 RRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP-GPEP 445
Query: 108 GSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE 167
GS G R + R P RPA G
Sbjct: 446 GSERGHGGHGKRAKERP--------------------PRARPA---------STSPSPGA 476
Query: 168 TGREDGRAGVGKGGHRSPGVTPR---LARSPPDPGCRS 202
GR G GK RSPG PR +RSP RS
Sbjct: 477 HGRRGGPE--GKSSSRSPGPHPRSWSSSRSPSKSRSRS 512
Score = 35.0 bits (79), Expect = 0.066
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 67 KPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCS 126
K SRSP P P S++S + A S R PSP P R RH
Sbjct: 486 KSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRD-KDGEGRARHSE 544
Query: 127 SRCCRCRRRRRS 138
+ R RRR RS
Sbjct: 545 AEATRARRRSRS 556
Score = 30.0 bits (66), Expect = 2.1
Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 8/107 (7%)
Query: 154 AGCQAWGGERGRGETGREDGRAGVGKGGHRSPGVTPRLARSPPDPGCRSEGEADV----Q 209
+G WG + G +G+ G G G SP P S P P R + A
Sbjct: 303 SGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKP----SSPSPRVRDKAAAAAPTPPA 358
Query: 210 GGQFENCCGEAECRPGQAFRVAGMKSSRRGAGVGACHSQLSCAAPPR 256
G+ A G+ R AG RR S+ S +AP R
Sbjct: 359 RGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 45.4 bits (106), Expect = 5e-05
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 24 QTRKRPRALRAVSTRT-------ARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPT-- 74
+TR R R+ +RT RP + +SR R + P ++ PR+R P R+P
Sbjct: 273 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRP-SPRRRTPPRR 331
Query: 75 -PVPPSFA---SDQRARVRVCAGANGAGASGP--RGPSPGSPPPPGLSSSRRRHRHCSSR 128
P PP S R R R A +G+ +S R SP PP SS R+ R S
Sbjct: 332 MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPS 391
Query: 129 CCRCRRRRR 137
RRR R
Sbjct: 392 ASPPRRRHR 400
Score = 30.4 bits (67), Expect = 1.6
Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 17/133 (12%)
Query: 19 RLRPAQTRKRPRALRAVSTRTARPPQSLQS---RCRGFFPAQQQQPRQRKIKPDS----- 70
R R R+RP R S R PP+ + R P ++++ + S
Sbjct: 305 RSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS 364
Query: 71 ---RSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
RSP PP S + R + + R P +PPP + RH
Sbjct: 365 SRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPP------KTRHSPTPQ 418
Query: 128 RCCRCRRRRRSLA 140
+ R R+ R S++
Sbjct: 419 QSNRTRKSRVSVS 431
Score = 30.0 bits (66), Expect = 2.1
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 57 QQQQPRQR-KIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGL 115
++ +PR R + K SR+ + P +R R R + + S R PSP PP
Sbjct: 272 EKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR 331
Query: 116 SSSRRRHRHCSSRCCRCRRRRRSLALL 142
RHR S RRRRRS A L
Sbjct: 332 MPPPPRHRRSRS---PVRRRRRSSASL 355
>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
Length = 1426
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/208 (25%), Positives = 76/208 (36%), Gaps = 51/208 (24%)
Query: 17 NVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSP--- 73
N RL+P P + + A PP+ L G + K+ P SP
Sbjct: 251 NTRLQPTPPIPAP------APKPAAPPRPLDRESPGV---------ENKLIPSVGSPASS 295
Query: 74 TPVPP-----SFASDQRARVRVCAGANGAGASGPRGPSP-----GSPP-----PPGLSSS 118
TP+PP + + RA V G+N + A P+ P P G PP P GLS
Sbjct: 296 TPLPPDGTGPNSTPNNRAVTPVSQGSNSSSAD-PKAPPPPPVSSGEPPTLGENPDGLSQE 354
Query: 119 RRRHRHCSSRCCRCRRR-----------------RRSLALLLFPWLRPAWQLAGCQAWGG 161
+ HR S + R +R +++ +L P +P + A
Sbjct: 355 QLEHRERSLQTLRDIQRMLFPDEKEFTGAQSGGPQQNPGVLDGPQKKPEGPIQAMMAQSQ 414
Query: 162 ERGRGETGREDGRAGVGKGGHRSPGVTP 189
G+G R D A G GHR +P
Sbjct: 415 SLGKGPGPRTDVGAPFGPQGHRDVPFSP 442
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 0.001
Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)
Query: 12 SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
S+ G V P + A R RT PP +S F A +P Q +++
Sbjct: 63 SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 68 PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
P + P P P+ A+ Q A R G +G SGP GS G SR
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178
Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
+ C RCR R A P+ RP L G G R G G G G
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228
Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
PG A S P S+ + G A RV G RR G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269
Query: 242 VGACHS-QLSCAAPPRGKY 259
G +L APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 0.001
Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)
Query: 12 SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
S+ G V P + A R RT PP +S F A +P Q +++
Sbjct: 63 SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 68 PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
P + P P P+ A+ Q A R G +G SGP GS G SR
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178
Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
+ C RCR R A P+ RP L G G R G G G G
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228
Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
PG A S P S+ + G A RV G RR G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269
Query: 242 VGACHS-QLSCAAPPRGKY 259
G +L APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 0.001
Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)
Query: 12 SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
S+ G V P + A R RT PP +S F A +P Q +++
Sbjct: 63 SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120
Query: 68 PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
P + P P P+ A+ Q A R G +G SGP GS G SR
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178
Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
+ C RCR R A P+ RP L G G R G G G G
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228
Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
PG A S P S+ + G A RV G RR G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269
Query: 242 VGACHS-QLSCAAPPRGKY 259
G +L APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 27 KRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRA 86
K PRA +A P+S S P + Q R RS P P S + ++
Sbjct: 60 KSPRAALDGGVASAASPESKPS------PGTKGQLRGES----DRSKQPPPASSPTKRKG 109
Query: 87 RVRVCAGANGAGASGPRGPSPGSPP---PPGLSSSRRRHRHCSSRCCRCRRRRRSL-ALL 142
R R ASGPR P+ SPP P ++ R R + +
Sbjct: 110 RSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSS 169
Query: 143 LFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGGHRSPGVTPR 190
L P ++P + R G RE GRA G + G+ PR
Sbjct: 170 LLPEIKPEHKRGPLPNHFNGRAEGGRSRELGRAAGAPGASDADGLKPR 217
>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
Length = 522
Score = 40.8 bits (94), Expect = 0.001
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 16/132 (12%)
Query: 2 RTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQP 61
R +T P + N R P + P A P++ + F PA++
Sbjct: 11 RASEAGATAPKASARNARGAPMDPTESPAA-----------PEAALPKAGKFGPARKSGS 59
Query: 62 RQRKIKPDSRSPTPVPPSFASDQRA--RVRVCAGANGAGASGPRGPSPGSPPPPGLS--- 116
RQ+K PD++ PV + A ++A R + ++ A G G P + P LS
Sbjct: 60 RQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAG 119
Query: 117 SSRRRHRHCSSR 128
S R+R CS++
Sbjct: 120 SCRQRGARCSTK 131
>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)
Query: 68 PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
P++RSP P+ P AGA + PR P PGS P G R+ H S
Sbjct: 73 PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118
Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
RC C L PW A L Q GG E G + G+E G G
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169
Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
R+ TP A +P EG +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201
>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)
Query: 68 PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
P++RSP P+ P AGA + PR P PGS P G R+ H S
Sbjct: 73 PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118
Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
RC C L PW A L Q GG E G + G+E G G
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169
Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
R+ TP A +P EG +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201
>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)
Query: 68 PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
P++RSP P+ P AGA + PR P PGS P G R+ H S
Sbjct: 73 PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118
Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
RC C L PW A L Q GG E G + G+E G G
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169
Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
R+ TP A +P EG +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 39.7 bits (91), Expect = 0.003
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 27/190 (14%)
Query: 35 VSTRTARP--PQSLQSRCRGFFPA---QQQQPRQRKIKPDSRSPTPVPPSFASDQRARVR 89
+ST + RP SL G P ++ Q R + P P +AR R
Sbjct: 1 MSTLSGRPFSSSSLSRETIGVQPGWGGEEVQGLARAGLAAGKGQRPPGPGRVRAAQARAR 60
Query: 90 VCAGANGAGASGPRGPSPG-----SPPPPGLSSSR-----------RRHRHCSSRCC--R 131
GA A G RGP + P L ++R RR C+ +
Sbjct: 61 RGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120
Query: 132 CRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE--TGREDGRAGVGKGGHRSPGVTP 189
CR+ RS FP LR WQ A Q W + G G + RE+ A G G +PG+
Sbjct: 121 CRQSPRSHGQP-FPQLRSHWQ-APRQGWPAQEGGGRRPSRREEAAALAGGGKRTAPGLRG 178
Query: 190 RLARSPPDPG 199
R R+ G
Sbjct: 179 RGGRAAAGQG 188
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 39.7 bits (91), Expect = 0.003
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 17/104 (16%)
Query: 99 ASGPRGPSPGSPPPPGLSSSRRRHRH-----CSSRCCRCRRRRRS-LALLLFPWLRPAWQ 152
A P PGSPPP +S + S +C S L +FPW++ + Q
Sbjct: 79 APEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQ 138
Query: 153 LA-----------GCQAWGGERGRGETGREDGRAGVGKGGHRSP 185
+ GC GG G G +G G G G GG +SP
Sbjct: 139 TSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSP 182
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)
Query: 29 PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
PRA + P +SR R ++++ R ++ SRS R+R
Sbjct: 22 PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69
Query: 89 RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
+ +G S P GPS G SPPPP SS R R R SR RR R
Sbjct: 70 FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129
Query: 137 RSLALL 142
RSL+LL
Sbjct: 130 RSLSLL 135
Score = 31.6 bits (70), Expect = 0.72
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
P P PPPP SS R C R R R RS + R + L +
Sbjct: 11 PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64
Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
R R + G +G GG S G +P A SPP P
Sbjct: 65 SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)
Query: 29 PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
PRA + P +SR R ++++ R ++ SRS R+R
Sbjct: 22 PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69
Query: 89 RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
+ +G S P GPS G SPPPP SS R R R SR RR R
Sbjct: 70 FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129
Query: 137 RSLALL 142
RSL+LL
Sbjct: 130 RSLSLL 135
Score = 31.6 bits (70), Expect = 0.72
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
P P PPPP SS R C R R R RS + R + L +
Sbjct: 11 PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64
Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
R R + G +G GG S G +P A SPP P
Sbjct: 65 SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)
Query: 29 PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
PRA + P +SR R ++++ R ++ SRS R+R
Sbjct: 22 PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69
Query: 89 RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
+ +G S P GPS G SPPPP SS R R R SR RR R
Sbjct: 70 FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129
Query: 137 RSLALL 142
RSL+LL
Sbjct: 130 RSLSLL 135
Score = 31.6 bits (70), Expect = 0.72
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
P P PPPP SS R C R R R RS + R + L +
Sbjct: 11 PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64
Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
R R + G +G GG S G +P A SPP P
Sbjct: 65 SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 39.3 bits (90), Expect = 0.003
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 23 AQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ--PRQRKIKPDSRSPTPVPPSF 80
++T R R+ R+ T + S +SR P + + PR R+ P SP P S
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRR-SPSVSSPEPAEKSR 1740
Query: 81 ASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRS 138
+S R R A + + RG SP SP P GL SR R R +R R R R S
Sbjct: 1741 SS----RRRRSASSPRTKTTSRRGRSP-SPKPRGLQRSRSRSRREKTRTTRRRDRSGS 1793
Score = 36.6 bits (83), Expect = 0.023
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 4 GGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQ 63
G S P+ G + PA+ R R R +R+ P + +SR R PA+++ +
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRT--PARRRSRTR 628
Query: 64 RKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPP--PGLSSSR-- 119
++ SRS +P S S R+R G + + RG S P G S SR
Sbjct: 629 SPVRRRSRSRSPARRSGRS--RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Query: 120 -RRHRHCSSRCCRCRRRRRSL 139
RR R S R R R RSL
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSL 707
Score = 36.6 bits (83), Expect = 0.023
Identities = 50/209 (23%), Positives = 77/209 (36%), Gaps = 32/209 (15%)
Query: 8 STDPSSIGANVRLRPAQTRKR---PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR 64
S+ S G+++ ++P KR P + R RPP+ PA++++ R
Sbjct: 2558 SSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPT--------PAKRKR-RSS 2608
Query: 65 KIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSP-------------P 111
S S + S +S + + ++ + +S PSP P P
Sbjct: 2609 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKP 2668
Query: 112 PPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLA--GCQAWGGERGRGETG 169
PPG SR + S R RSL+ RP+ Q + Q+ ERG
Sbjct: 2669 PPGERRSRSPRKPIDS-----LRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQ 2723
Query: 170 REDGRAGVGKGGHRSPGVTPRLARSPPDP 198
R D R+ K +P P RS P
Sbjct: 2724 RGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 32.7 bits (73), Expect = 0.33
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 4/148 (2%)
Query: 2 RTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQP 61
RT H PS + +R+R A + T+R +S + RG ++ +
Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSR 1778
Query: 62 RQRKIKPDSRSPTPVPPSFASD-QRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
R++ R + S + QR+R R G SG SP SS RR
Sbjct: 1779 REKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRR 1838
Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLR 148
R R + R R R R+ PW R
Sbjct: 1839 RGRSRTPPTSRKRSRSRTSPA---PWKR 1863
Score = 29.6 bits (65), Expect = 2.8
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 23 AQTRKRPRALRAVSTRTARPPQSLQ-SRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFA 81
+++ + R R+ + ++ R + + R R PA + + R DS S + S +
Sbjct: 220 SESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRS 279
Query: 82 SDQRARVRVCA--GANGAGASGPRGPSPGSPPPPGLSSSRR 120
A+ A G + + ASG RG PG +S++R
Sbjct: 280 RSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQR 320
Score = 29.3 bits (64), Expect = 3.6
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Query: 1 MRTGGCHSTDPSSIG--ANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQ 58
+R G HS P G + R ++R R R+ S+ + + R R +
Sbjct: 708 VRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRS 767
Query: 59 QQPRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGP--RGPSPGSPPPPGLS 116
+ + ++ +P P + R R + A + P R S SPPP S
Sbjct: 768 KAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKS 827
Query: 117 SSRRRHRHCSS 127
+ R H SS
Sbjct: 828 KTPSRQSHSSS 838
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 38.5 bits (88), Expect = 0.006
Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)
Query: 22 PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
PA TR PR V R P++ + RG+ P Q PR+R P P
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230
Query: 77 PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
PP+ S + R AGA G G SG G P P ++S C
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282
Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
L P W +L +A G + G G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 38.5 bits (88), Expect = 0.006
Identities = 53/190 (27%), Positives = 70/190 (36%), Gaps = 27/190 (14%)
Query: 35 VSTRTARP--PQSLQSRCRGFFPA---QQQQPRQRKIKPDSRSPTPVPPSFASDQRARVR 89
+ST + RP SL G P ++ Q R + P P +AR R
Sbjct: 1 MSTLSGRPFSSSSLSRETIGVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARAR 60
Query: 90 VCAGANGAGASGPRGPSPG-----SPPPPGLSSSR-----------RRHRHCSSRCC--R 131
GA A G RGP + P L ++R RR C+ +
Sbjct: 61 RGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120
Query: 132 CRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE--TGREDGRAGVGKGGHRSPGVTP 189
CR+ RS FP LR WQ A Q W + G G + RE+ A G G +PG
Sbjct: 121 CRQSPRSHGQP-FPQLRSHWQ-APRQGWPAQEGGGRRPSRREEAAALAGGGKRTAPGRRG 178
Query: 190 RLARSPPDPG 199
R R+ G
Sbjct: 179 RGGRAAAGQG 188
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 38.5 bits (88), Expect = 0.006
Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)
Query: 22 PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
PA TR PR V R P++ + RG+ P Q PR+R P P
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230
Query: 77 PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
PP+ S + R AGA G G SG G P P ++S C
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282
Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
L P W +L +A G + G G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 38.5 bits (88), Expect = 0.006
Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)
Query: 22 PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
PA TR PR V R P++ + RG+ P Q PR+R P P
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230
Query: 77 PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
PP+ S + R AGA G G SG G P P ++S C
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282
Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
L P W +L +A G + G G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 38.1 bits (87), Expect = 0.008
Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 46 LQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGP 105
L+ R P +PR+++++ R V + R R G G G P
Sbjct: 77 LEGTPRPAAPGAAPRPRRQRLR---RRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEP 133
Query: 106 SPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGR 165
SPG+ G + + RHR R RR + L + P + P AG G GR
Sbjct: 134 SPGARGAVGAAPAAARHRKPRGR----SRRAPQMPLRVLPPILPGLSRAG----GATGGR 185
Query: 166 GETGRE--DGRAGVGKGGHRSPGVTPRLARSP 195
G GR GR+G+ P P L P
Sbjct: 186 GLPGRRGLPGRSGLQGAAVPPPVGVPSLRGRP 217
Score = 35.8 bits (81), Expect = 0.038
Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 29/112 (25%)
Query: 88 VRVCAGANGAGASGPRGPSPGSPPP--PGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFP 145
VR C G S GP G+P P PG + RR R RRRR +
Sbjct: 59 VRGCKREGSPGVSAQGGPLEGTPRPAAPGAAPRPRRQ--------RLRRRRAKVG----- 105
Query: 146 WLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG--HRSPGVTPRLARSP 195
WG R RG R G G GG SPG + +P
Sbjct: 106 ------------GWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGAVGAAP 145
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 38.1 bits (87), Expect = 0.008
Identities = 56/207 (27%), Positives = 73/207 (35%), Gaps = 44/207 (21%)
Query: 19 RLRPAQTRKRPRALRAVST-RTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVP 77
R R TR+ P AL +ARP ++R P P + + P SPTP P
Sbjct: 80 RRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAP 136
Query: 78 PSFASDQRARVRVCAGAN-----GAGASG----PRGPSPGS-----------PPPPGLSS 117
+ RA +R+ G ASG P G + G PG
Sbjct: 137 LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLR 196
Query: 118 SRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGER---GRGETGREDG- 173
R R R + R C RRR ++ + AGC+A G R G R G
Sbjct: 197 PRGRGRGRARRTCPARRRGEEDLR-----VQDSCPQAGCRAMGQRRVLKAEGARARARGG 251
Query: 174 -----------RAGVGKGGHRSPGVTP 189
R+G G GG R+ G P
Sbjct: 252 VCFGPRPGMQKRSGGGSGGQRAGGWQP 278
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 38.1 bits (87), Expect = 0.008
Identities = 56/207 (27%), Positives = 73/207 (35%), Gaps = 44/207 (21%)
Query: 19 RLRPAQTRKRPRALRAVST-RTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVP 77
R R TR+ P AL +ARP ++R P P + + P SPTP P
Sbjct: 80 RRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAP 136
Query: 78 PSFASDQRARVRVCAGAN-----GAGASG----PRGPSPGS-----------PPPPGLSS 117
+ RA +R+ G ASG P G + G PG
Sbjct: 137 LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLR 196
Query: 118 SRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGER---GRGETGREDG- 173
R R R + R C RRR ++ + AGC+A G R G R G
Sbjct: 197 PRGRGRGRARRTCPARRRGEEDLR-----VQDSCPQAGCRAMGQRRVLKAEGARARARGG 251
Query: 174 -----------RAGVGKGGHRSPGVTP 189
R+G G GG R+ G P
Sbjct: 252 VCFGPRPGMQKRSGGGSGGQRAGGWQP 278
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 37.7 bits (86), Expect = 0.010
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 5 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 63
Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
+ R R C+S C S F W AW L AGC Q G
Sbjct: 64 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 123
Query: 161 GERGRGE 167
GERG E
Sbjct: 124 GERGGAE 130
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 37.7 bits (86), Expect = 0.010
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 26 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84
Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
+ R R C+S C S F W AW L AGC Q G
Sbjct: 85 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144
Query: 161 GERGRGE 167
GERG E
Sbjct: 145 GERGGAE 151
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 37.7 bits (86), Expect = 0.010
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)
Query: 62 RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
R R SR P P + SD + R+R G G G SGP P+ P P P
Sbjct: 26 RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84
Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
+ R R C+S C S F W AW L AGC Q G
Sbjct: 85 PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144
Query: 161 GERGRGE 167
GERG E
Sbjct: 145 GERGGAE 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,543,015
Number of Sequences: 37866
Number of extensions: 906194
Number of successful extensions: 9649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 585
Number of HSP's that attempted gapping in prelim test: 8298
Number of HSP's gapped (non-prelim): 1828
length of query: 260
length of database: 18,247,518
effective HSP length: 100
effective length of query: 160
effective length of database: 14,460,918
effective search space: 2313746880
effective search space used: 2313746880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.