Guide to the Human Genome
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Search of human proteins with 169167899

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]
         (260 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169167813 PREDICTED: hypothetical protein [Homo sapiens]           554   e-158
gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]           554   e-158
gi|169167609 PREDICTED: hypothetical protein [Homo sapiens]           551   e-157
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             47   2e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         45   5e-05
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]                       42   4e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    41   0.001
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    41   0.001
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            41   0.001
gi|62988361 absent in melanoma 1 [Homo sapiens]                        41   0.001
gi|115511030 hypothetical protein LOC115004 [Homo sapiens]             41   0.001
gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]            40   0.003
gi|84570137 homeobox B3 [Homo sapiens]                                 40   0.003
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ...    39   0.003
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        39   0.003
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]            39   0.006
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]            39   0.006
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ...    39   0.006
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ...    39   0.006
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]            38   0.008
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]            38   0.008
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ...    38   0.008
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]            38   0.010
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]            38   0.010
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ...    38   0.010

>gi|169167813 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score =  554 bits (1428), Expect = e-158
 Identities = 260/260 (100%), Positives = 260/260 (100%)

Query: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
           MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60

Query: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
           PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120

Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
           RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180

Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
           GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240

Query: 241 GVGACHSQLSCAAPPRGKYW 260
           GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260


>gi|169167899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score =  554 bits (1428), Expect = e-158
 Identities = 260/260 (100%), Positives = 260/260 (100%)

Query: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
           MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60

Query: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
           PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120

Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
           RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180

Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
           GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240

Query: 241 GVGACHSQLSCAAPPRGKYW 260
           GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260


>gi|169167609 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score =  551 bits (1420), Expect = e-157
 Identities = 259/260 (99%), Positives = 259/260 (99%)

Query: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60
           MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ
Sbjct: 1   MRTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ 60

Query: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
           PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR
Sbjct: 61  PRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120

Query: 121 RHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180
           RHRHCSS CCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG
Sbjct: 121 RHRHCSSCCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKG 180

Query: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240
           GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA
Sbjct: 181 GHRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGA 240

Query: 241 GVGACHSQLSCAAPPRGKYW 260
           GVGACHSQLSCAAPPRGKYW
Sbjct: 241 GVGACHSQLSCAAPPRGKYW 260


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 63/218 (28%), Positives = 79/218 (36%), Gaps = 49/218 (22%)

Query: 2   RTGGCHSTD--PSSIGANVRLRPAQTRKRP--RALRAVSTRTARPPQSLQSRCRGFFPAQ 57
           R G  HS    PSS    VR + A     P  R   + S R+A   Q    R  G    +
Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386

Query: 58  QQQPRQRKIKPDS---------RSPTPVPPSFASDQRARVRVCAGA-NGAGASGPRGPSP 107
           +++ R+R+    S         R P P PP  +S   +R R  + + +G GA GP GP P
Sbjct: 387 RRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP-GPEP 445

Query: 108 GSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE 167
           GS    G    R + R                     P  RPA               G 
Sbjct: 446 GSERGHGGHGKRAKERP--------------------PRARPA---------STSPSPGA 476

Query: 168 TGREDGRAGVGKGGHRSPGVTPR---LARSPPDPGCRS 202
            GR  G    GK   RSPG  PR    +RSP     RS
Sbjct: 477 HGRRGGPE--GKSSSRSPGPHPRSWSSSRSPSKSRSRS 512



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 67  KPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCS 126
           K  SRSP P P S++S +         A     S  R PSP  P          R RH  
Sbjct: 486 KSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRD-KDGEGRARHSE 544

Query: 127 SRCCRCRRRRRS 138
           +   R RRR RS
Sbjct: 545 AEATRARRRSRS 556



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 8/107 (7%)

Query: 154 AGCQAWGGERGRGETGREDGRAGVGKGGHRSPGVTPRLARSPPDPGCRSEGEADV----Q 209
           +G   WG  +  G +G+  G  G   G   SP   P    S P P  R +  A       
Sbjct: 303 SGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKP----SSPSPRVRDKAAAAAPTPPA 358

Query: 210 GGQFENCCGEAECRPGQAFRVAGMKSSRRGAGVGACHSQLSCAAPPR 256
            G+       A    G+  R AG    RR        S+ S +AP R
Sbjct: 359 RGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 24  QTRKRPRALRAVSTRT-------ARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPT-- 74
           +TR R R+     +RT        RP +  +SR R + P ++  PR+R   P  R+P   
Sbjct: 273 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRP-SPRRRTPPRR 331

Query: 75  -PVPPSFA---SDQRARVRVCAGANGAGASGP--RGPSPGSPPPPGLSSSRRRHRHCSSR 128
            P PP      S  R R R  A  +G+ +S    R  SP   PP   SS  R+ R  S  
Sbjct: 332 MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPS 391

Query: 129 CCRCRRRRR 137
               RRR R
Sbjct: 392 ASPPRRRHR 400



 Score = 30.4 bits (67), Expect = 1.6
 Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 17/133 (12%)

Query: 19  RLRPAQTRKRPRALRAVSTRTARPPQSLQS---RCRGFFPAQQQQPRQRKIKPDS----- 70
           R R    R+RP   R  S R   PP+ +       R   P ++++     +   S     
Sbjct: 305 RSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS 364

Query: 71  ---RSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
              RSP   PP   S    + R  + +        R   P +PPP      + RH     
Sbjct: 365 SRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPP------KTRHSPTPQ 418

Query: 128 RCCRCRRRRRSLA 140
           +  R R+ R S++
Sbjct: 419 QSNRTRKSRVSVS 431



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 57  QQQQPRQR-KIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGL 115
           ++ +PR R + K  SR+ +  P      +R R R  + +     S  R PSP    PP  
Sbjct: 272 EKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR 331

Query: 116 SSSRRRHRHCSSRCCRCRRRRRSLALL 142
                RHR   S     RRRRRS A L
Sbjct: 332 MPPPPRHRRSRS---PVRRRRRSSASL 355


>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
          Length = 1426

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 53/208 (25%), Positives = 76/208 (36%), Gaps = 51/208 (24%)

Query: 17  NVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSP--- 73
           N RL+P      P      + + A PP+ L     G          + K+ P   SP   
Sbjct: 251 NTRLQPTPPIPAP------APKPAAPPRPLDRESPGV---------ENKLIPSVGSPASS 295

Query: 74  TPVPP-----SFASDQRARVRVCAGANGAGASGPRGPSP-----GSPP-----PPGLSSS 118
           TP+PP     +   + RA   V  G+N + A  P+ P P     G PP     P GLS  
Sbjct: 296 TPLPPDGTGPNSTPNNRAVTPVSQGSNSSSAD-PKAPPPPPVSSGEPPTLGENPDGLSQE 354

Query: 119 RRRHRHCSSRCCRCRRR-----------------RRSLALLLFPWLRPAWQLAGCQAWGG 161
           +  HR  S +  R  +R                 +++  +L  P  +P   +    A   
Sbjct: 355 QLEHRERSLQTLRDIQRMLFPDEKEFTGAQSGGPQQNPGVLDGPQKKPEGPIQAMMAQSQ 414

Query: 162 ERGRGETGREDGRAGVGKGGHRSPGVTP 189
             G+G   R D  A  G  GHR    +P
Sbjct: 415 SLGKGPGPRTDVGAPFGPQGHRDVPFSP 442


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)

Query: 12  SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
           S+ G  V   P    +   A R    RT  PP   +S     F A   +P Q     +++
Sbjct: 63  SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120

Query: 68  PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
           P +  P P        P+ A+ Q A  R   G   +G SGP     GS    G   SR  
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178

Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
            +     C RCR   R  A    P+ RP   L          G G   R  G  G G G 
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228

Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
              PG     A S P     S+    +                G A RV G    RR  G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269

Query: 242 VGACHS-QLSCAAPPRGKY 259
            G     +L   APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)

Query: 12  SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
           S+ G  V   P    +   A R    RT  PP   +S     F A   +P Q     +++
Sbjct: 63  SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120

Query: 68  PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
           P +  P P        P+ A+ Q A  R   G   +G SGP     GS    G   SR  
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178

Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
            +     C RCR   R  A    P+ RP   L          G G   R  G  G G G 
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228

Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
              PG     A S P     S+    +                G A RV G    RR  G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269

Query: 242 VGACHS-QLSCAAPPRGKY 259
            G     +L   APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 71/259 (27%), Positives = 88/259 (33%), Gaps = 44/259 (16%)

Query: 12  SSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR----KIK 67
           S+ G  V   P    +   A R    RT  PP   +S     F A   +P Q     +++
Sbjct: 63  SAAGTEVSGAPHPDSRTRPAARPPHPRTRSPPG--RSGSGTTFSAVPPRPSQHQSGSRLR 120

Query: 68  PDSRSPTP------VPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRR 121
           P +  P P        P+ A+ Q A  R   G   +G SGP     GS    G   SR  
Sbjct: 121 PAAPGPRPGCSSARASPAPAAPQ-AAARTAPGRAASGGSGPGSRGQGS-DQVGARPSRAG 178

Query: 122 HRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG 181
            +     C RCR   R  A    P+ RP   L          G G   R  G  G G G 
Sbjct: 179 GQPPPLTCRRCRAAPRRSAR---PFRRPGLPLK------SRPGSGTGARSCGTWGSGGG- 228

Query: 182 HRSPGVTPRLARSPPDPGCRSEGEADVQGGQFENCCGEAECRPGQAFRVAGMKSSRRGAG 241
              PG     A S P     S+    +                G A RV G    RR  G
Sbjct: 229 ---PGTA---AASSPSADFSSDSPQPI-------------IIFGGALRVRGCGGRRRSNG 269

Query: 242 VGACHS-QLSCAAPPRGKY 259
            G     +L   APPR +Y
Sbjct: 270 QGTQPGCRLLSPAPPRRRY 288


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 44/168 (26%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 27  KRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRA 86
           K PRA       +A  P+S  S      P  + Q R        RS  P P S  + ++ 
Sbjct: 60  KSPRAALDGGVASAASPESKPS------PGTKGQLRGES----DRSKQPPPASSPTKRKG 109

Query: 87  RVRVCAGANGAGASGPRGPSPGSPP---PPGLSSSRRRHRHCSSRCCRCRRRRRSL-ALL 142
           R R         ASGPR P+  SPP   P     ++           R   R   + +  
Sbjct: 110 RSRALEAVPAPPASGPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSS 169

Query: 143 LFPWLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGGHRSPGVTPR 190
           L P ++P  +          R  G   RE GRA    G   + G+ PR
Sbjct: 170 LLPEIKPEHKRGPLPNHFNGRAEGGRSRELGRAAGAPGASDADGLKPR 217


>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
          Length = 522

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 16/132 (12%)

Query: 2   RTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQP 61
           R     +T P +   N R  P    + P A           P++   +   F PA++   
Sbjct: 11  RASEAGATAPKASARNARGAPMDPTESPAA-----------PEAALPKAGKFGPARKSGS 59

Query: 62  RQRKIKPDSRSPTPVPPSFASDQRA--RVRVCAGANGAGASGPRGPSPGSPPPPGLS--- 116
           RQ+K  PD++   PV  + A  ++A  R +    ++   A G  G  P +   P LS   
Sbjct: 60  RQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAG 119

Query: 117 SSRRRHRHCSSR 128
           S R+R   CS++
Sbjct: 120 SCRQRGARCSTK 131


>gi|169213977 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)

Query: 68  PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
           P++RSP P+ P             AGA    +  PR P PGS P  G    R+ H   S 
Sbjct: 73  PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118

Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
           RC  C      L     PW   A  L   Q  GG      E G  + G+E    G G   
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169

Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
              R+   TP  A    +P    EG    +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201


>gi|169214385 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)

Query: 68  PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
           P++RSP P+ P             AGA    +  PR P PGS P  G    R+ H   S 
Sbjct: 73  PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118

Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
           RC  C      L     PW   A  L   Q  GG      E G  + G+E    G G   
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169

Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
              R+   TP  A    +P    EG    +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201


>gi|169213314 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 31/152 (20%)

Query: 68  PDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSS 127
           P++RSP P+ P             AGA    +  PR P PGS P  G    R+ H   S 
Sbjct: 73  PNARSPHPLGP-------------AGAGVPRSLSPR-PVPGSEPSTGTRVGRQGHGERSR 118

Query: 128 RCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG------ERGRGETGREDGRAGVGKG- 180
           RC  C      L     PW   A  L   Q  GG      E G  + G+E    G G   
Sbjct: 119 RCRCC------LGDAASPW---AQSLPYTQVQGGRGFLPEEVGPHQRGQEGAGTGWGDAT 169

Query: 181 -GHRSPGVTPRLARSPPDPGCRSEGEADVQGG 211
              R+   TP  A    +P    EG    +GG
Sbjct: 170 LSRRNCTPTPPYAGGSREPARGKEGVWTPEGG 201


>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 27/190 (14%)

Query: 35  VSTRTARP--PQSLQSRCRGFFPA---QQQQPRQRKIKPDSRSPTPVPPSFASDQRARVR 89
           +ST + RP    SL     G  P    ++ Q   R      +   P  P      +AR R
Sbjct: 1   MSTLSGRPFSSSSLSRETIGVQPGWGGEEVQGLARAGLAAGKGQRPPGPGRVRAAQARAR 60

Query: 90  VCAGANGAGASGPRGPSPG-----SPPPPGLSSSR-----------RRHRHCSSRCC--R 131
              GA    A G RGP        + P   L ++R           RR   C+      +
Sbjct: 61  RGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120

Query: 132 CRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE--TGREDGRAGVGKGGHRSPGVTP 189
           CR+  RS     FP LR  WQ A  Q W  + G G   + RE+  A  G G   +PG+  
Sbjct: 121 CRQSPRSHGQP-FPQLRSHWQ-APRQGWPAQEGGGRRPSRREEAAALAGGGKRTAPGLRG 178

Query: 190 RLARSPPDPG 199
           R  R+    G
Sbjct: 179 RGGRAAAGQG 188


>gi|84570137 homeobox B3 [Homo sapiens]
          Length = 431

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 17/104 (16%)

Query: 99  ASGPRGPSPGSPPPPGLSSSRRRHRH-----CSSRCCRCRRRRRS-LALLLFPWLRPAWQ 152
           A  P    PGSPPP    +S   +         S   +C     S L   +FPW++ + Q
Sbjct: 79  APEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQ 138

Query: 153 LA-----------GCQAWGGERGRGETGREDGRAGVGKGGHRSP 185
            +           GC   GG  G G +G   G  G G GG +SP
Sbjct: 139 TSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSP 182


>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 29  PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
           PRA     +    P    +SR R    ++++    R ++  SRS            R+R 
Sbjct: 22  PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69

Query: 89  RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
                +  +G S P GPS G           SPPPP  SS R R R   SR    RR R 
Sbjct: 70  FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129

Query: 137 RSLALL 142
           RSL+LL
Sbjct: 130 RSLSLL 135



 Score = 31.6 bits (70), Expect = 0.72
 Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
           P  P    PPPP  SS  R        C R R R RS +       R +  L   +    
Sbjct: 11  PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64

Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
            R R  +    G +G    GG  S G +P     A SPP P
Sbjct: 65  SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105


>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 29  PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
           PRA     +    P    +SR R    ++++    R ++  SRS            R+R 
Sbjct: 22  PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69

Query: 89  RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
                +  +G S P GPS G           SPPPP  SS R R R   SR    RR R 
Sbjct: 70  FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129

Query: 137 RSLALL 142
           RSL+LL
Sbjct: 130 RSLSLL 135



 Score = 31.6 bits (70), Expect = 0.72
 Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
           P  P    PPPP  SS  R        C R R R RS +       R +  L   +    
Sbjct: 11  PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64

Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
            R R  +    G +G    GG  S G +P     A SPP P
Sbjct: 65  SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105


>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
           sapiens]
          Length = 231

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/126 (31%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 29  PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARV 88
           PRA     +    P    +SR R    ++++    R ++  SRS            R+R 
Sbjct: 22  PRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRS------------RSRP 69

Query: 89  RVCAGANGAGASGPRGPSPG-----------SPPPPGLSSSRRRHRHCSSRCCRCRR-RR 136
                +  +G S P GPS G           SPPPP  SS R R R   SR    RR R 
Sbjct: 70  FSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLRLLRRFRS 129

Query: 137 RSLALL 142
           RSL+LL
Sbjct: 130 RSLSLL 135



 Score = 31.6 bits (70), Expect = 0.72
 Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 102 PRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGG 161
           P  P    PPPP  SS  R        C R R R RS +       R +  L   +    
Sbjct: 11  PSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRS------RRRSRSLRWLRRRSR 64

Query: 162 ERGRGETGREDGRAGVGK-GGHRSPGVTPR---LARSPPDP 198
            R R  +    G +G    GG  S G +P     A SPP P
Sbjct: 65  SRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPP 105


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 23   AQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQ--PRQRKIKPDSRSPTPVPPSF 80
            ++T  R R+ R+    T +   S +SR     P  + +  PR R+  P   SP P   S 
Sbjct: 1682 SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRR-SPSVSSPEPAEKSR 1740

Query: 81   ASDQRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRS 138
            +S    R R  A +     +  RG SP SP P GL  SR R R   +R  R R R  S
Sbjct: 1741 SS----RRRRSASSPRTKTTSRRGRSP-SPKPRGLQRSRSRSRREKTRTTRRRDRSGS 1793



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 9/141 (6%)

Query: 4   GGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQ 63
           G   S  P+  G +    PA+ R R R      +R+  P +  +SR R   PA+++   +
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRT--PARRRSRTR 628

Query: 64  RKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSPPP--PGLSSSR-- 119
             ++  SRS +P   S  S  R+R     G + +     RG S    P    G S SR  
Sbjct: 629 SPVRRRSRSRSPARRSGRS--RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686

Query: 120 -RRHRHCSSRCCRCRRRRRSL 139
            RR R  S    R R R RSL
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSL 707



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 50/209 (23%), Positives = 77/209 (36%), Gaps = 32/209 (15%)

Query: 8    STDPSSIGANVRLRPAQTRKR---PRALRAVSTRTARPPQSLQSRCRGFFPAQQQQPRQR 64
            S+   S G+++ ++P    KR   P      + R  RPP+          PA++++ R  
Sbjct: 2558 SSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPT--------PAKRKR-RSS 2608

Query: 65   KIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGPSPGSP-------------P 111
                 S S +    S +S   +     + ++ + +S    PSP  P             P
Sbjct: 2609 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKP 2668

Query: 112  PPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLA--GCQAWGGERGRGETG 169
            PPG   SR   +   S      R  RSL+       RP+ Q +    Q+   ERG     
Sbjct: 2669 PPGERRSRSPRKPIDS-----LRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQ 2723

Query: 170  REDGRAGVGKGGHRSPGVTPRLARSPPDP 198
            R D R+   K    +P   P   RS   P
Sbjct: 2724 RGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752



 Score = 32.7 bits (73), Expect = 0.33
 Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 4/148 (2%)

Query: 2    RTGGCHSTDPSSIGANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQQQP 61
            RT   H   PS        +   +R+R  A    +  T+R  +S   + RG   ++ +  
Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSR 1778

Query: 62   RQRKIKPDSRSPTPVPPSFASD-QRARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRR 120
            R++      R  +    S +   QR+R R        G SG    SP        SS RR
Sbjct: 1779 REKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRR 1838

Query: 121  RHRHCSSRCCRCRRRRRSLALLLFPWLR 148
            R R  +    R R R R+      PW R
Sbjct: 1839 RGRSRTPPTSRKRSRSRTSPA---PWKR 1863



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 23  AQTRKRPRALRAVSTRTARPPQSLQ-SRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFA 81
           +++  + R  R+ + ++ R  +  +  R R   PA + +   R    DS S +    S +
Sbjct: 220 SESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRS 279

Query: 82  SDQRARVRVCA--GANGAGASGPRGPSPGSPPPPGLSSSRR 120
               A+    A  G + + ASG RG        PG +S++R
Sbjct: 280 RSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQR 320



 Score = 29.3 bits (64), Expect = 3.6
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 4/131 (3%)

Query: 1   MRTGGCHSTDPSSIG--ANVRLRPAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPAQQ 58
           +R G  HS  P   G   +   R  ++R   R  R+ S+   +  +    R R     + 
Sbjct: 708 VRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRS 767

Query: 59  QQPRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGP--RGPSPGSPPPPGLS 116
           +   +  ++      +P P   +     R R  +    A +  P  R  S  SPPP   S
Sbjct: 768 KAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKS 827

Query: 117 SSRRRHRHCSS 127
            +  R  H SS
Sbjct: 828 KTPSRQSHSSS 838


>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)

Query: 22  PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
           PA TR  PR    V     R P++   + RG+ P      Q   PR+R        P P 
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230

Query: 77  PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
           PP+  S +     R    AGA G G SG      G P P   ++S      C        
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282

Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
                    L P     W +L   +A G + G    G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320


>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 53/190 (27%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 35  VSTRTARP--PQSLQSRCRGFFPA---QQQQPRQRKIKPDSRSPTPVPPSFASDQRARVR 89
           +ST + RP    SL     G  P    ++ Q   R      +   P  P      +AR R
Sbjct: 1   MSTLSGRPFSSSSLSRETIGVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARAR 60

Query: 90  VCAGANGAGASGPRGPSPG-----SPPPPGLSSSR-----------RRHRHCSSRCC--R 131
              GA    A G RGP        + P   L ++R           RR   C+      +
Sbjct: 61  RGGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120

Query: 132 CRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGRGE--TGREDGRAGVGKGGHRSPGVTP 189
           CR+  RS     FP LR  WQ A  Q W  + G G   + RE+  A  G G   +PG   
Sbjct: 121 CRQSPRSHGQP-FPQLRSHWQ-APRQGWPAQEGGGRRPSRREEAAALAGGGKRTAPGRRG 178

Query: 190 RLARSPPDPG 199
           R  R+    G
Sbjct: 179 RGGRAAAGQG 188


>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
           sapiens]
          Length = 336

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)

Query: 22  PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
           PA TR  PR    V     R P++   + RG+ P      Q   PR+R        P P 
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230

Query: 77  PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
           PP+  S +     R    AGA G G SG      G P P   ++S      C        
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282

Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
                    L P     W +L   +A G + G    G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320


>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
           sapiens]
          Length = 321

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 48/168 (28%), Positives = 61/168 (36%), Gaps = 39/168 (23%)

Query: 22  PAQTRKRPRALRAVSTRTARPPQSLQSRCRGFFPA-----QQQQPRQRKIKPDSRSPTPV 76
           PA TR  PR    V     R P++   + RG+ P      Q   PR+R        P P 
Sbjct: 183 PAPTRPTPR----VQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRR--------PGPG 230

Query: 77  PPSFASDQR---ARVRVCAGANGAGASGPRGPSPGSPPPPGLSSSRRRHRHCSSRCCRCR 133
           PP+  S +     R    AGA G G SG      G P P   ++S      C        
Sbjct: 231 PPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC-------- 282

Query: 134 RRRRSLALLLFPWLRPAW-QLAGCQAWGGERGRGETGREDGRAGVGKG 180
                    L P     W +L   +A G + G    G E GR G G+G
Sbjct: 283 ---------LPPRRGCGWAELLEREAGGSDTGHLPLGNEGGR-GEGEG 320


>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 13/152 (8%)

Query: 46  LQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVPPSFASDQRARVRVCAGANGAGASGPRGP 105
           L+   R   P    +PR+++++   R    V     +  R   R   G  G    G   P
Sbjct: 77  LEGTPRPAAPGAAPRPRRQRLR---RRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEP 133

Query: 106 SPGSPPPPGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGERGR 165
           SPG+    G + +  RHR    R     RR   + L + P + P    AG    G   GR
Sbjct: 134 SPGARGAVGAAPAAARHRKPRGR----SRRAPQMPLRVLPPILPGLSRAG----GATGGR 185

Query: 166 GETGRE--DGRAGVGKGGHRSPGVTPRLARSP 195
           G  GR    GR+G+       P   P L   P
Sbjct: 186 GLPGRRGLPGRSGLQGAAVPPPVGVPSLRGRP 217



 Score = 35.8 bits (81), Expect = 0.038
 Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 29/112 (25%)

Query: 88  VRVCAGANGAGASGPRGPSPGSPPP--PGLSSSRRRHRHCSSRCCRCRRRRRSLALLLFP 145
           VR C      G S   GP  G+P P  PG +   RR         R RRRR  +      
Sbjct: 59  VRGCKREGSPGVSAQGGPLEGTPRPAAPGAAPRPRRQ--------RLRRRRAKVG----- 105

Query: 146 WLRPAWQLAGCQAWGGERGRGETGREDGRAGVGKGG--HRSPGVTPRLARSP 195
                        WG  R RG   R  G  G   GG    SPG    +  +P
Sbjct: 106 ------------GWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGAVGAAP 145


>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 382

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 56/207 (27%), Positives = 73/207 (35%), Gaps = 44/207 (21%)

Query: 19  RLRPAQTRKRPRALRAVST-RTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVP 77
           R R   TR+ P AL       +ARP    ++R     P     P +  + P   SPTP P
Sbjct: 80  RRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAP 136

Query: 78  PSFASDQRARVRVCAGAN-----GAGASG----PRGPSPGS-----------PPPPGLSS 117
            +     RA +R+  G          ASG    P G + G               PG   
Sbjct: 137 LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLR 196

Query: 118 SRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGER---GRGETGREDG- 173
            R R R  + R C  RRR           ++ +   AGC+A G  R     G   R  G 
Sbjct: 197 PRGRGRGRARRTCPARRRGEEDLR-----VQDSCPQAGCRAMGQRRVLKAEGARARARGG 251

Query: 174 -----------RAGVGKGGHRSPGVTP 189
                      R+G G GG R+ G  P
Sbjct: 252 VCFGPRPGMQKRSGGGSGGQRAGGWQP 278


>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
           sapiens]
          Length = 382

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 56/207 (27%), Positives = 73/207 (35%), Gaps = 44/207 (21%)

Query: 19  RLRPAQTRKRPRALRAVST-RTARPPQSLQSRCRGFFPAQQQQPRQRKIKPDSRSPTPVP 77
           R R   TR+ P AL       +ARP    ++R     P     P +  + P   SPTP P
Sbjct: 80  RRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAP 136

Query: 78  PSFASDQRARVRVCAGAN-----GAGASG----PRGPSPGS-----------PPPPGLSS 117
            +     RA +R+  G          ASG    P G + G               PG   
Sbjct: 137 LARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLR 196

Query: 118 SRRRHRHCSSRCCRCRRRRRSLALLLFPWLRPAWQLAGCQAWGGER---GRGETGREDG- 173
            R R R  + R C  RRR           ++ +   AGC+A G  R     G   R  G 
Sbjct: 197 PRGRGRGRARRTCPARRRGEEDLR-----VQDSCPQAGCRAMGQRRVLKAEGARARARGG 251

Query: 174 -----------RAGVGKGGHRSPGVTP 189
                      R+G G GG R+ G  P
Sbjct: 252 VCFGPRPGMQKRSGGGSGGQRAGGWQP 278


>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 190

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 62  RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
           R R     SR P P   +  SD   +  R+R   G  G G SGP  P+     P  P P 
Sbjct: 5   RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 63

Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
              + R   R C+S C        S     F       W   AW L      AGC Q  G
Sbjct: 64  PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 123

Query: 161 GERGRGE 167
           GERG  E
Sbjct: 124 GERGGAE 130


>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 62  RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
           R R     SR P P   +  SD   +  R+R   G  G G SGP  P+     P  P P 
Sbjct: 26  RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84

Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
              + R   R C+S C        S     F       W   AW L      AGC Q  G
Sbjct: 85  PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144

Query: 161 GERGRGE 167
           GERG  E
Sbjct: 145 GERGGAE 151


>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
           sapiens]
          Length = 211

 Score = 37.7 bits (86), Expect = 0.010
 Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 22/127 (17%)

Query: 62  RQRKIKPDSRSPTPVPPSFASD---QRARVRVCAGANGAGASGPRGPS-----PGSPPPP 113
           R R     SR P P   +  SD   +  R+R   G  G G SGP  P+     P  P P 
Sbjct: 26  RPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEG-GLSGPAPPARRRAYPLQPRPT 84

Query: 114 GLSSSRRRHRHCSSRCCRCRRRRRSLALLLF------PWLRPAWQL------AGC-QAWG 160
              + R   R C+S C        S     F       W   AW L      AGC Q  G
Sbjct: 85  PRLTGRSSWRACTSTCSPTTLTAISSGEKCFTSSSTEKWPGSAWHLGDGQRHAGCAQVVG 144

Query: 161 GERGRGE 167
           GERG  E
Sbjct: 145 GERGGAE 151


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,543,015
Number of Sequences: 37866
Number of extensions: 906194
Number of successful extensions: 9649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 585
Number of HSP's that attempted gapping in prelim test: 8298
Number of HSP's gapped (non-prelim): 1828
length of query: 260
length of database: 18,247,518
effective HSP length: 100
effective length of query: 160
effective length of database: 14,460,918
effective search space: 2313746880
effective search space used: 2313746880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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