Search of human proteins with 169164185

Search of human proteins with 169164185

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein
[Homo sapiens]
         (234 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   477   e-135
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   477   e-135
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   442   e-124
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 297   6e-81
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             273   7e-74
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              273   7e-74
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              273   7e-74
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   270   8e-73
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    270   8e-73
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   270   8e-73
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   268   2e-72
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   268   3e-72
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         268   3e-72
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   268   3e-72
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             263   7e-71
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             263   7e-71
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             263   7e-71
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   261   5e-70
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   260   6e-70
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   260   6e-70
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   260   6e-70
gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]             258   3e-69
gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]             258   3e-69
gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   246   2e-65
gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   246   2e-65
gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   246   2e-65
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]        241   5e-64
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             235   2e-62
gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]             235   2e-62
gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]             235   2e-62

>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  477 bits (1227), Expect = e-135
 Identities = 234/234 (100%), Positives = 234/234 (100%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180
           WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180

Query: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT 234
           SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT
Sbjct: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT 234


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  477 bits (1227), Expect = e-135
 Identities = 234/234 (100%), Positives = 234/234 (100%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180
           WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180

Query: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT 234
           SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT
Sbjct: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGPMTQPT 234


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  442 bits (1137), Expect = e-124
 Identities = 218/229 (95%), Positives = 219/229 (95%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180
           WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLWILADPSIDDLLLLAV 180

Query: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQSVPLMSRLQAEPGP 229
           SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQ+  L S     P P
Sbjct: 181 SRVASLKPPEQRPGIFSEQQPTRQLEETPGLFCSQASLLSSSGHFSPPP 229


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  297 bits (760), Expect = 6e-81
 Identities = 142/164 (86%), Positives = 150/164 (91%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFFDI+V G+PLG VSF +FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT +NGTGGKS+YGEKF+DENFILK   PGILSMA AGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL GKHVVFGKVKEGMNIVEAME FGSRNGKTSKKITIADCGQL
Sbjct: 121 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  273 bits (699), Expect = 7e-74
 Identities = 130/162 (80%), Positives = 140/162 (86%)

Query: 4   PTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQ 63
           PTVFFDI+++ KPLGHVSF++FADK  KTA+NF ALSTGEKG  YK SCFHRIIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLI 123
           GGDFT++NGTG KS+YGEKFDDENFILK   PGI SMA AGPNTNGSQF  CTA T WL 
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLW 165
           G HVV GKVKEGMNI EAME FGSRNGKTSKKITIADCGQL+
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQLY 168


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  273 bits (699), Expect = 7e-74
 Identities = 130/162 (80%), Positives = 140/162 (86%)

Query: 4   PTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQ 63
           PTVFFDI+++ KPLGHVSF++FADK  KTA+NF ALSTGEKG  YK SCFHRIIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLI 123
           GGDFT++NGTG KS+YGEKFDDENFILK   PGI SMA AGPNTNGSQF  CTA T WL 
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLW 165
           G HVV GKVKEGMNI EAME FGSRNGKTSKKITIADCGQL+
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQLY 168


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  273 bits (699), Expect = 7e-74
 Identities = 130/162 (80%), Positives = 140/162 (86%)

Query: 4   PTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQ 63
           PTVFFDI+++ KPLGHVSF++FADK  KTA+NF ALSTGEKG  YK SCFHRIIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLI 123
           GGDFT++NGTG KS+YGEKFDDENFILK   PGI SMA AGPNTNGSQF  CTA T WL 
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQLW 165
           G HVV GKVKEGMNI EAME FGSRNGKTSKKITIADCGQL+
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQLY 168


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  270 bits (690), Expect = 8e-73
 Identities = 129/164 (78%), Positives = 140/164 (85%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFF ISV G+ LG +SF +FADK  KTA+NF AL+TGEKG  YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NGTGGKS+YGEK DD+NFILK   PGILSMA AGPNTNGSQFFICTA +E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL  KHVV GKVKEGMNIVEAME FGSRNGKTSKK+TI D GQL
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (690), Expect = 8e-73
 Identities = 129/164 (78%), Positives = 140/164 (85%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFF ISV G+ LG +SF +FADK  KTA+NF AL+TGEKG  YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NGTGGKS+YGEK DD+NFILK   PGILSMA AGPNTNGSQFFICTA +E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL  KHVV GKVKEGMNIVEAME FGSRNGKTSKK+TI D GQL
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (690), Expect = 8e-73
 Identities = 129/164 (78%), Positives = 140/164 (85%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFF ISV G+ LG +SF +FADK  KTA+NF AL+TGEKG  YKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NGTGGKS+YGEK DD+NFILK   PGILSMA AGPNTNGSQFFICTA +E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL  KHVV GKVKEGMNIVEAME FGSRNGKTSKK+TI D GQL
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  268 bits (686), Expect = 2e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVN  +FFDI+V GKPLG +S + FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT+ NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFICTA TE
Sbjct: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  268 bits (685), Expect = 3e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVN  VFFDI+V GKPLG +S ++FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT +NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFIC A TE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  268 bits (685), Expect = 3e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVN  VFFDI+V GKPLG +S ++FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT +NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFIC A TE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  268 bits (685), Expect = 3e-72
 Identities = 129/163 (79%), Positives = 138/163 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVN  VFFDI+V GKPLG +S ++FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT +NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFIC A TE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEAME FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  263 bits (673), Expect = 7e-71
 Identities = 126/164 (76%), Positives = 138/164 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTA  E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  263 bits (673), Expect = 7e-71
 Identities = 126/164 (76%), Positives = 138/164 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTA  E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  263 bits (673), Expect = 7e-71
 Identities = 126/164 (76%), Positives = 138/164 (84%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTA  E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  261 bits (666), Expect = 5e-70
 Identities = 126/163 (77%), Positives = 135/163 (82%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVN  VFF+I+  GKPLG +S ++FADK+ KTA+NFRALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGGDFT  NGTG KS+YGEKFDDEN I K    GILSMA AGPNTNGSQFFIC A TE
Sbjct: 61  MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQ 163
           WL GKHV FGKVKE +NIVEA E FG RN KTSKKITIADCGQ
Sbjct: 121 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQ 163


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  260 bits (665), Expect = 6e-70
 Identities = 129/163 (79%), Positives = 136/163 (83%)

Query: 2   VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFM 61
           VNPTVFFDI+V G+PLGHVSF +FADK  K+A+   ALSTGEKG  YKGSCFHRIIPGFM
Sbjct: 48  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 107

Query: 62  CQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEW 121
           CQGGDFT +  TGGKSLY EKFDDENFILK   PGILSMA AGPNTN SQ FICTA TE 
Sbjct: 108 CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 167

Query: 122 LIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           L GKHVVFG VKEGM IVEAME FG RNGKTSK+ITIADC QL
Sbjct: 168 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 210


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  260 bits (665), Expect = 6e-70
 Identities = 129/163 (79%), Positives = 136/163 (83%)

Query: 2   VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFM 61
           VNPTVFFDI+V G+PLGHVSF +FADK  K+A+   ALSTGEKG  YKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEW 121
           CQGGDFT +  TGGKSLY EKFDDENFILK   PGILSMA AGPNTN SQ FICTA TE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           L GKHVVFG VKEGM IVEAME FG RNGKTSK+ITIADC QL
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  260 bits (665), Expect = 6e-70
 Identities = 129/163 (79%), Positives = 136/163 (83%)

Query: 2   VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFM 61
           VNPTVFFDI+V G+PLGHVSF +FADK  K+A+   ALSTGEKG  YKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEW 121
           CQGGDFT +  TGGKSLY EKFDDENFILK   PGILSMA AGPNTN SQ FICTA TE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
           L GKHVVFG VKEGM IVEAME FG RNGKTSK+ITIADC QL
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  258 bits (659), Expect = 3e-69
 Identities = 127/165 (76%), Positives = 139/165 (84%), Gaps = 3/165 (1%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFF++++  KPL H+SF +FADKL KTA+NF ALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGG FT +NGTGGKS+YGEK DDENFILK   PG LSMA AGPNTNGS+FFICTA T 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKT- 119

Query: 121 WLIG-KHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
            ++G KHVV  KVKEGMNIV AME FGSRNGKTSK IT ADCGQL
Sbjct: 120 -VVGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQL 163


>gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  258 bits (659), Expect = 3e-69
 Identities = 127/165 (76%), Positives = 139/165 (84%), Gaps = 3/165 (1%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPTVFF++++  KPL H+SF +FADKL KTA+NF ALSTGEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MCQGG FT +NGTGGKS+YGEK DDENFILK   PG LSMA AGPNTNGS+FFICTA T 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKT- 119

Query: 121 WLIG-KHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
            ++G KHVV  KVKEGMNIV AME FGSRNGKTSK IT ADCGQL
Sbjct: 120 -VVGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQL 163


>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  246 bits (627), Expect = 2e-65
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+A +E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  246 bits (627), Expect = 2e-65
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+A +E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  246 bits (627), Expect = 2e-65
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+A +E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score =  241 bits (614), Expect = 5e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 3   NPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMC 62
           NP V+ D+  +GKPLG V   + AD + KTA+NFRAL TGEKG  YKGS FHR+IP FMC
Sbjct: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104

Query: 63  QGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWL 122
           Q GDFT +NGTGGKS+YG +F DENF LK + PG+LSMA AGPNTNGSQFFICT  T+WL
Sbjct: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164

Query: 123 IGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164
            GKHVVFG VKEGM++V+ +E FGS++G+TSKKI I DCGQL
Sbjct: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  235 bits (600), Expect = 2e-62
 Identities = 113/143 (79%), Positives = 122/143 (85%)

Query: 22  FRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKSLYGE 81
           F++F +K+SK ++NF A ST EKG  YKGSCFHRIIPGFMCQ GDFT +NGTG KSLYGE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLIGKHVVFGKVKEGMNIVEA 141
           KFD ENFILK   PGILSMA  G NTN SQFFICTA TEWL GKHVVFGKVKEGM+I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MEPFGSRNGKTSKKITIADCGQL 164
           ME FGSRNGKTSKKITIADCGQL
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


>gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  235 bits (600), Expect = 2e-62
 Identities = 113/143 (79%), Positives = 122/143 (85%)

Query: 22  FRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKSLYGE 81
           F++F +K+SK ++NF A ST EKG  YKGSCFHRIIPGFMCQ GDFT +NGTG KSLYGE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLIGKHVVFGKVKEGMNIVEA 141
           KFD ENFILK   PGILSMA  G NTN SQFFICTA TEWL GKHVVFGKVKEGM+I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MEPFGSRNGKTSKKITIADCGQL 164
           ME FGSRNGKTSKKITIADCGQL
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


>gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  235 bits (600), Expect = 2e-62
 Identities = 113/143 (79%), Positives = 122/143 (85%)

Query: 22  FRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMCQGGDFTYNNGTGGKSLYGE 81
           F++F +K+SK ++NF A ST EKG  YKGSCFHRIIPGFMCQ GDFT +NGTG KSLYGE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWLIGKHVVFGKVKEGMNIVEA 141
           KFD ENFILK   PGILSMA  G NTN SQFFICTA TEWL GKHVVFGKVKEGM+I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MEPFGSRNGKTSKKITIADCGQL 164
           ME FGSRNGKTSKKITIADCGQL
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,056,752
Number of Sequences: 37866
Number of extensions: 461617
Number of successful extensions: 962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 858
Number of HSP's gapped (non-prelim): 91
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.