Search of human proteins with 169162878

Search of human proteins with 169162878

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]           352   1e-97
gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]           300   5e-82
gi|113403785 PREDICTED: hypothetical protein [Homo sapiens]           300   5e-82
gi|113411437 PREDICTED: similar to UPF0627 protein ENSP000003581...   291   2e-79
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]            35   0.040
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]         32   0.34 
gi|10047086 mitogen-inducible gene 6 protein [Homo sapiens]            31   0.58 
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              30   0.76 
gi|148612870 chromodomain helicase DNA binding protein 1-like [H...    30   0.99 
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]     30   0.99 
gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]     30   0.99 
gi|169165721 PREDICTED: similar to hCG1811563 [Homo sapiens]           30   1.3  
gi|113415341 PREDICTED: similar to hCG1811563 [Homo sapiens]           30   1.3  
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]            29   1.7  
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ...    29   1.7  
gi|14916427 naked cuticle homolog 2 [Homo sapiens]                     29   1.7  
gi|14149696 SEC31 homolog B [Homo sapiens]                             29   1.7  
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]               29   2.2  
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]                29   2.2  
gi|38683851 round spermatid basic protein 1 [Homo sapiens]             29   2.2  
gi|237512940 early growth response 4 [Homo sapiens]                    28   2.9  
gi|9558749 elongation factor-2 kinase [Homo sapiens]                   28   2.9  
gi|27734911 DAZ interacting protein 1-like [Homo sapiens]              28   2.9  
gi|237757312 synaptojanin 1 isoform c [Homo sapiens]                   28   3.8  
gi|237757310 synaptojanin 1 isoform a [Homo sapiens]                   28   3.8  
gi|237757308 synaptojanin 1 isoform b [Homo sapiens]                   28   3.8  
gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo...    28   3.8  
gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Hom...    28   3.8  
gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Hom...    28   3.8  
gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Hom...    28   3.8  

>gi|169162878 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  352 bits (902), Expect = 1e-97
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60
           MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA
Sbjct: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60

Query: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120
           GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE
Sbjct: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120

Query: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
           VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169


>gi|169162889 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  300 bits (767), Expect = 5e-82
 Identities = 148/169 (87%), Positives = 152/169 (89%)

Query: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60
           M  SKGLWKERPSAHTSECFSTTACPVAFILLVWNSQ+PAGLQS CTGRHPSLS RAQRA
Sbjct: 1   MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60

Query: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120
           G  ASREEGTFWTE VGQER LI SGSS+NESQED+GA LI   GLKADNRR+SSTWANE
Sbjct: 61  GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120

Query: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
           VEDRRPQ TPALNLTPSHPHPP  L TFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169


>gi|113403785 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 169

 Score =  300 bits (767), Expect = 5e-82
 Identities = 148/169 (87%), Positives = 152/169 (89%)

Query: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60
           M  SKGLWKERPSAHTSECFSTTACPVAFILLVWNSQ+PAGLQS CTGRHPSLS RAQRA
Sbjct: 1   MVSSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQTPAGLQSLCTGRHPSLSARAQRA 60

Query: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120
           G  ASREEGTFWTE VGQER LI SGSS+NESQED+GA LI   GLKADNRR+SSTWANE
Sbjct: 61  GPRASREEGTFWTERVGQERWLIRSGSSQNESQEDQGAGLISQAGLKADNRRESSTWANE 120

Query: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
           VEDRRPQ TPALNLTPSHPHPP  L TFLRSVIGIQIPPGLVAAGGTVA
Sbjct: 121 VEDRRPQCTPALNLTPSHPHPPHSLTTFLRSVIGIQIPPGLVAAGGTVA 169


>gi|113411437 PREDICTED: similar to UPF0627 protein ENSP00000358171
           isoform 1 [Homo sapiens]
          Length = 169

 Score =  291 bits (744), Expect = 2e-79
 Identities = 142/169 (84%), Positives = 151/169 (89%)

Query: 1   MGCSKGLWKERPSAHTSECFSTTACPVAFILLVWNSQSPAGLQSFCTGRHPSLSVRAQRA 60
           MG SKGLWKE+PSAHTSECFSTTACPVA ILLVWNSQ+PAGLQS CTGRHPSLS RAQ A
Sbjct: 1   MGSSKGLWKEKPSAHTSECFSTTACPVACILLVWNSQTPAGLQSLCTGRHPSLSARAQWA 60

Query: 61  GTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANE 120
           G  ASREEGTFWTE VGQERRLI SGSS+NESQED+GADLI + GLKADN+R+SSTWANE
Sbjct: 61  GPRASREEGTFWTEPVGQERRLIRSGSSQNESQEDQGADLISHEGLKADNQRESSTWANE 120

Query: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
           VEDRRPQ T ALNLTPSH HPP PL TF R+VIGI+IPPGLVA GGTVA
Sbjct: 121 VEDRRPQCTSALNLTPSHLHPPHPLTTFFRNVIGIKIPPGLVAMGGTVA 169


>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 412

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 117 WANEVEDRRPQ-STPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTV 168
           W   +   RP    PAL   P H HPPR   ++ R +  +Q PPG+ AAG  +
Sbjct: 213 WPASLSPWRPYWEFPALVCFPIHEHPPRA--SWARHLDTVQTPPGVGAAGAEI 263


>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
          Length = 566

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%)

Query: 87  SSENESQEDEGADLIPYTGLKADNRRKSSTWANEVE-------DRRPQSTPALNLTP-SH 138
           SS + S  D GA +  +     +N R   T     +       D+ P S P   L   +H
Sbjct: 334 SSSSSSSRDSGA-IASFLAEGKENSRIERTADQHPQARDSSGADQHPDSAPRQGLQVLTH 392

Query: 139 PHPPRPLITFLRSVIGIQIP-PGLVAAG 165
           P PP P   +   V+G ++P PG  + G
Sbjct: 393 PEPPLPQGPYTEGVLGRRVPVPGSTSGG 420


>gi|10047086 mitogen-inducible gene 6 protein [Homo sapiens]
          Length = 462

 Score = 30.8 bits (68), Expect = 0.58
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 14/112 (12%)

Query: 51  PSLSVRAQRAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTG--LKA 108
           P    R +R+ +G +   G+F    +      IH  S  ++  + E    +P     +K 
Sbjct: 240 PQTHRRLRRSHSGPA---GSFNKPAIRISNCCIHRASPNSDEDKPEVPPRVPIPPRPVKP 296

Query: 109 DNRR-----KSSTWANEVEDRRPQSTPALNLTPSHPHPPRP--LITFLRSVI 153
           D RR      SST+++E  DR P+  P   L+PS+   P P  L ++L  V+
Sbjct: 297 DYRRWSAEVTSSTYSDE--DRPPKVPPREPLSPSNSRTPSPKSLPSYLNGVM 346


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 21/124 (16%)

Query: 35   NSQSPAGLQSFCTGRHPSLSVRAQRAGTGASREEGTFW------TECVGQERRLI---HS 85
            +S  P   +S C  R P+L + +  A + +   +G  W      T    Q R+ I   HS
Sbjct: 904  HSTGPGSGRSSCQPRKPALDLSSPPATSQSPEVKGGTWSQAEKATSLYRQPRKAIAWHHS 963

Query: 86   G--SSENESQED------EGADLIPYTGLKADNRRKSSTWANEVEDRRPQSTPALNLTPS 137
            G  S +N + E       +  +  P  G KA   R  + W  +  D+R +S P+ +  P+
Sbjct: 964  GPPSGQNRTSESSLARPRQSRERSPPVGRKASPTR--THWVPQA-DKRRRSLPS-SYRPA 1019

Query: 138  HPHP 141
             P P
Sbjct: 1020 QPSP 1023


>gi|148612870 chromodomain helicase DNA binding protein 1-like [Homo
           sapiens]
          Length = 897

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 65  SREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANEVEDR 124
           S+E+   + + V  ++ L+   S E  S  ++G+ LIP   ++   +RK      E+EDR
Sbjct: 585 SKEDRKSFEQLVNLQKTLLEKASQEGRSLRNKGSVLIPGL-VEGSTKRKRVLSPEELEDR 643

Query: 125 RPQSTPA 131
           + +   A
Sbjct: 644 QKKRQEA 650


>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
          Length = 902

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 16/67 (23%), Positives = 30/67 (44%)

Query: 59  RAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWA 118
           R  +G+S+      T   G  +R + +GS E+    + G+  +      A N +  ++W 
Sbjct: 307 RPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWT 366

Query: 119 NEVEDRR 125
           N+   RR
Sbjct: 367 NDQGARR 373


>gi|27477138 zinc finger antiviral protein isoform 2 [Homo sapiens]
          Length = 699

 Score = 30.0 bits (66), Expect = 0.99
 Identities = 16/67 (23%), Positives = 30/67 (44%)

Query: 59  RAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWA 118
           R  +G+S+      T   G  +R + +GS E+    + G+  +      A N +  ++W 
Sbjct: 307 RPPSGSSKATDLGGTSQAGTSQRFLENGSQEDLLHGNPGSTYLASNSTSAPNWKSLTSWT 366

Query: 119 NEVEDRR 125
           N+   RR
Sbjct: 367 NDQGARR 373


>gi|169165721 PREDICTED: similar to hCG1811563 [Homo sapiens]
          Length = 322

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 8/65 (12%)

Query: 46  CTGRHPSLSVRAQRAGTGASREEGTFWTECVGQERRLIHS--------GSSENESQEDEG 97
           C G      +  +R G G  RE          QERRL H+        G  E E     G
Sbjct: 74  CMGAQKFQDLTLERPGPGGCREVSITPASAESQERRLCHAQKPEMQLQGQREPERLTSHG 133

Query: 98  ADLIP 102
           + L+P
Sbjct: 134 SSLVP 138


>gi|113415341 PREDICTED: similar to hCG1811563 [Homo sapiens]
          Length = 322

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 8/65 (12%)

Query: 46  CTGRHPSLSVRAQRAGTGASREEGTFWTECVGQERRLIHS--------GSSENESQEDEG 97
           C G      +  +R G G  RE          QERRL H+        G  E E     G
Sbjct: 74  CMGAQKFQDLTLERPGPGGCREVSITPASAESQERRLCHAQKPEMQLQGQREPERLTSHG 133

Query: 98  ADLIP 102
           + L+P
Sbjct: 134 SSLVP 138


>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 446

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 132 LNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTV 168
           L L+  H HPPR   ++ R +  +Q PPG+ AAG  +
Sbjct: 263 LYLSLLHQHPPRA--SWARHLDTVQTPPGVGAAGAEI 297


>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
           sapiens]
          Length = 487

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 132 LNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTV 168
           L L+  H HPPR   ++ R +  +Q PPG+ AAG  +
Sbjct: 263 LYLSLLHQHPPRA--SWARHLDTVQTPPGVGAAGAEI 297


>gi|14916427 naked cuticle homolog 2 [Homo sapiens]
          Length = 451

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 17/44 (38%), Positives = 21/44 (47%)

Query: 121 VEDRRPQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAA 164
           VE   P S PA     + P P  P   FL+S  G   PPG+ A+
Sbjct: 303 VEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPAS 346


>gi|14149696 SEC31 homolog B [Homo sapiens]
          Length = 1179

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query: 126 PQSTPALNLTPSHPHP 141
           PQS+PA+ L PSHP P
Sbjct: 837 PQSSPAMPLAPSHPSP 852


>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
          Length = 1090

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 44  SFCTGRHPSLSVRAQRAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPY 103
           ++ + + P L +   R    +  ++GT     VG E  L+  G S + + E  G D+   
Sbjct: 135 NYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNATETSGPDM--- 191

Query: 104 TGLKADNRRKSSTWANEVEDRRPQS---TPALNLTPSHPHPPRPL-ITFLRSVIGIQIPP 159
           T  K     +   W     D    +     A +L+P H +    + +   +SV GI   P
Sbjct: 192 TIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKSVPGITSTP 251


>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
          Length = 1103

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 44  SFCTGRHPSLSVRAQRAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPY 103
           ++ + + P L +   R    +  ++GT     VG E  L+  G S + + E  G D+   
Sbjct: 135 NYISSQLPDLPILCSRTAEPSPGQDGTSRAAGVGWENVLLKEGESASNATETSGPDM--- 191

Query: 104 TGLKADNRRKSSTWANEVEDRRPQS---TPALNLTPSHPHPPRPL-ITFLRSVIGIQIPP 159
           T  K     +   W     D    +     A +L+P H +    + +   +SV GI   P
Sbjct: 192 TIKKPPQLSEDDIWLKSEGDNYSATLLEPAASSLSPDHKNMEIEVSVAECKSVPGITSTP 251


>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
          Length = 802

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 19/94 (20%)

Query: 76  VGQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSSTWANEVEDRRPQSTPALNLT 135
           V ++RR    GS E   +  +   L P       +RR+ S        + P   P  N  
Sbjct: 85  VKRQRRSSSGGSQEKRGRPSQEPPLAP------PHRRRRSR-------QHPGPLPPTNAA 131

Query: 136 PSHPHPPRPLITFLRSVIGIQIPPGLVAAGGTVA 169
           P+ P P  PL+      +    PP L  AG  VA
Sbjct: 132 PTVPGPVEPLL------LPPPPPPSLAPAGPAVA 159


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 132 LNLTPSHPHPPRPLITFLRSVIGIQIPPGLVAA 164
           +   P HPH P  L   +  ++G+   PG  AA
Sbjct: 191 IQAVPEHPHDPEALFNLMSGILGLAPFPGPEAA 223


>gi|9558749 elongation factor-2 kinase [Homo sapiens]
          Length = 725

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 77  GQERRLIHSGSSENESQEDEGADLIPYTGLKADNRRKSS 115
           GQ  R  H G S+ +S ++EG  + P T   + N+  +S
Sbjct: 16  GQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNS 54


>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
          Length = 767

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 44  SFCTGRHPSLSVRAQRAGTGASREEGTFWTECVGQERRLIHSGSSENESQEDEGADLIPY 103
           S  T RH    +R QR       ++   ++E +    +L+   +S  + +++ GA +   
Sbjct: 480 SIQTLRHLESLLRVQR------EQKARKFSEFLSLRGKLVKEVTSRAKERQENGAAVSQP 533

Query: 104 TGLKADNRRKSSTWANEVEDRRPQSTPALNLTPSHPHPP 142
            G  +   ++S+    E + +      AL  TP+ P PP
Sbjct: 534 DGQPSVKSQQSALVTREAQPKTRTLQVALPSTPAEPPPP 572


>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
          Length = 1295

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 126  PQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPP 159
            PQ  PA  L P  P PPRP+    R     + PP
Sbjct: 1095 PQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1128


>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
          Length = 1612

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 126  PQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPP 159
            PQ  PA  L P  P PPRP+    R     + PP
Sbjct: 1134 PQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167


>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
          Length = 1350

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 126  PQSTPALNLTPSHPHPPRPLITFLRSVIGIQIPP 159
            PQ  PA  L P  P PPRP+    R     + PP
Sbjct: 1134 PQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPP 1167


>gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 1429

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 38  SPAGLQSFCTGRHPSLSVRAQRA-GTGASREE--GTFWTECVGQERRLIHSG----SSEN 90
           S A L S+ +   PSL+ R Q A GT    +E  G ++TE   +ER     G    ++  
Sbjct: 179 STAVLGSWGSPPQPSLAPREQEAPGTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVV 238

Query: 91  ESQEDEGADLIPYTGLKADNRRKS--STWANEVEDRRPQSTPALNLTPSHPHPPRPLI 146
            +       L P+      + R+S  STW  + ED   + T  L L   HP    PL+
Sbjct: 239 GTPPQAHTSLQPHHHPWEPSVRESLCSTWPWKNEDFNQKFTQLLLLQRPHPRSQDPLV 296


>gi|14719835 NLR family, pyrin domain containing 1 isoform 4 [Homo
           sapiens]
          Length = 1399

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 38  SPAGLQSFCTGRHPSLSVRAQRA-GTGASREE--GTFWTECVGQERRLIHSG----SSEN 90
           S A L S+ +   PSL+ R Q A GT    +E  G ++TE   +ER     G    ++  
Sbjct: 179 STAVLGSWGSPPQPSLAPREQEAPGTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVV 238

Query: 91  ESQEDEGADLIPYTGLKADNRRKS--STWANEVEDRRPQSTPALNLTPSHPHPPRPLI 146
            +       L P+      + R+S  STW  + ED   + T  L L   HP    PL+
Sbjct: 239 GTPPQAHTSLQPHHHPWEPSVRESLCSTWPWKNEDFNQKFTQLLLLQRPHPRSQDPLV 296


>gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Homo
           sapiens]
          Length = 1375

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 38  SPAGLQSFCTGRHPSLSVRAQRA-GTGASREE--GTFWTECVGQERRLIHSG----SSEN 90
           S A L S+ +   PSL+ R Q A GT    +E  G ++TE   +ER     G    ++  
Sbjct: 179 STAVLGSWGSPPQPSLAPREQEAPGTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVV 238

Query: 91  ESQEDEGADLIPYTGLKADNRRKS--STWANEVEDRRPQSTPALNLTPSHPHPPRPLI 146
            +       L P+      + R+S  STW  + ED   + T  L L   HP    PL+
Sbjct: 239 GTPPQAHTSLQPHHHPWEPSVRESLCSTWPWKNEDFNQKFTQLLLLQRPHPRSQDPLV 296


>gi|14719833 NLR family, pyrin domain containing 1 isoform 3 [Homo
           sapiens]
          Length = 1443

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 38  SPAGLQSFCTGRHPSLSVRAQRA-GTGASREE--GTFWTECVGQERRLIHSG----SSEN 90
           S A L S+ +   PSL+ R Q A GT    +E  G ++TE   +ER     G    ++  
Sbjct: 179 STAVLGSWGSPPQPSLAPREQEAPGTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVV 238

Query: 91  ESQEDEGADLIPYTGLKADNRRKS--STWANEVEDRRPQSTPALNLTPSHPHPPRPLI 146
            +       L P+      + R+S  STW  + ED   + T  L L   HP    PL+
Sbjct: 239 GTPPQAHTSLQPHHHPWEPSVRESLCSTWPWKNEDFNQKFTQLLLLQRPHPRSQDPLV 296


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,113,475
Number of Sequences: 37866
Number of extensions: 396895
Number of successful extensions: 1462
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1427
Number of HSP's gapped (non-prelim): 68
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.