Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 168229174
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|168229174 RNA binding motif protein 27 [Homo sapiens]
(1060 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 2149 0.0
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 768 0.0
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 78 4e-14
gi|160707881 formin 2 [Homo sapiens] 74 1e-12
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 71 5e-12
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 66 2e-10
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 65 3e-10
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 65 3e-10
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 65 3e-10
gi|110832843 TBP-associated factor 4 [Homo sapiens] 65 3e-10
gi|56549694 enabled homolog isoform a [Homo sapiens] 64 8e-10
gi|39930375 enabled homolog isoform b [Homo sapiens] 64 8e-10
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 64 8e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 64 8e-10
gi|210032580 SET domain containing 1B [Homo sapiens] 64 8e-10
gi|52426743 cisplatin resistance-associated overexpressed protei... 63 2e-09
gi|19923485 cisplatin resistance-associated overexpressed protei... 63 2e-09
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 62 2e-09
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 62 2e-09
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 62 2e-09
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 62 3e-09
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 62 3e-09
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 62 3e-09
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 61 5e-09
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 61 5e-09
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 2149 bits (5569), Expect = 0.0
Identities = 1060/1060 (100%), Positives = 1060/1060 (100%)
Query: 1 MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKE 60
MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKE
Sbjct: 1 MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKE 60
Query: 61 TSGFVDKLFESLYTKNYLPLLEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPS 120
TSGFVDKLFESLYTKNYLPLLEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPS
Sbjct: 61 TSGFVDKLFESLYTKNYLPLLEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPS 120
Query: 121 PQKTRSESSERRTREKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSR 180
PQKTRSESSERRTREKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSR
Sbjct: 121 PQKTRSESSERRTREKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSR 180
Query: 181 SRSRGRSKDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTV 240
SRSRGRSKDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTV
Sbjct: 181 SRSRGRSKDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTV 240
Query: 241 TVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGN 300
TVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGN
Sbjct: 241 TVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGN 300
Query: 301 DPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS 360
DPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS
Sbjct: 301 DPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS 360
Query: 361 MRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
MRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL
Sbjct: 361 MRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
Query: 421 LYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLV 480
LYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLV
Sbjct: 421 LYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLV 480
Query: 481 PDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIVIQTE 540
PDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIVIQTE
Sbjct: 481 PDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIVIQTE 540
Query: 541 PPVPVSINSNITRVVLEPDSRKRAMSGLEGPLTKKPWLGKQGNNNQNKPGFLRKNQYTNT 600
PPVPVSINSNITRVVLEPDSRKRAMSGLEGPLTKKPWLGKQGNNNQNKPGFLRKNQYTNT
Sbjct: 541 PPVPVSINSNITRVVLEPDSRKRAMSGLEGPLTKKPWLGKQGNNNQNKPGFLRKNQYTNT 600
Query: 601 KLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEA 660
KLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEA
Sbjct: 601 KLEVKKIPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEA 660
Query: 661 VLNNRFIRVLWHRENNEQPTLQSSAQLLLQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSA 720
VLNNRFIRVLWHRENNEQPTLQSSAQLLLQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSA
Sbjct: 661 VLNNRFIRVLWHRENNEQPTLQSSAQLLLQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSA 720
Query: 721 PSTVHGGIQKMMSKPQTSGAYVLNKVPVKHRLGHAGGNQSDASHLLNQSGGAGEDCQIFS 780
PSTVHGGIQKMMSKPQTSGAYVLNKVPVKHRLGHAGGNQSDASHLLNQSGGAGEDCQIFS
Sbjct: 721 PSTVHGGIQKMMSKPQTSGAYVLNKVPVKHRLGHAGGNQSDASHLLNQSGGAGEDCQIFS 780
Query: 781 TPGHPKMIYSSSNLKTPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIEC 840
TPGHPKMIYSSSNLKTPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIEC
Sbjct: 781 TPGHPKMIYSSSNLKTPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIEC 840
Query: 841 QKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQK 900
QKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQK
Sbjct: 841 QKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQK 900
Query: 901 ELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGG 960
ELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGG
Sbjct: 901 ELLDTELDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGG 960
Query: 961 RGRGSLNHMVVDHRPKALTVGGFIEEEKEDLLQHFSTANQGPKFKDRRLQISWHKPKVPS 1020
RGRGSLNHMVVDHRPKALTVGGFIEEEKEDLLQHFSTANQGPKFKDRRLQISWHKPKVPS
Sbjct: 961 RGRGSLNHMVVDHRPKALTVGGFIEEEKEDLLQHFSTANQGPKFKDRRLQISWHKPKVPS 1020
Query: 1021 ISTETEEEEVKEEETETSDLFLPDDDDEDEDEYESRSWRR 1060
ISTETEEEEVKEEETETSDLFLPDDDDEDEDEYESRSWRR
Sbjct: 1021 ISTETEEEEVKEEETETSDLFLPDDDDEDEDEYESRSWRR 1060
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 768 bits (1984), Expect = 0.0
Identities = 490/1129 (43%), Positives = 635/1129 (56%), Gaps = 222/1129 (19%)
Query: 1 MLIEDVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKE 60
M+IE+ +ALKSWL+K LEPICDADPSALA YV+ALVKKDK EKELKA C DQLDVFLQKE
Sbjct: 5 MIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKE 64
Query: 61 TSGFVDKLFESLYTKNYLPLLEPVKPEPKPLV------QEKEEIKEEVFQEPAEEERDGR 114
T FV+KLF+++ TK+YLP P +P L QEK+ KEE+ +E E++ R
Sbjct: 65 TQIFVEKLFDAVNTKSYLP--PPEQPSSGSLKVEFFPHQEKDIKKEEITKEEEREKKFSR 122
Query: 115 KKKYPSPQKTRSESSERRTREKKRED-GKWRDYDRYYERNELYREKYDWRRGRSKSRSKS 173
+ + PQ + R E+K++D + RDYDR R + YR++Y+ RRGRS+S S+S
Sbjct: 123 RLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRS 182
Query: 174 RGLSRSRSRSRGRSKDRDPNRN---VEHRERS----KFKSERND-LESSYVPVSAPPPNS 225
R S S+ R R R +DR R+ RER K+ +R D LE++Y PVS+ P S
Sbjct: 183 RSRSWSKERLRERDRDRSRTRSRSRTRSRERDLVKPKYDLDRTDPLENNYTPVSSVPSIS 242
Query: 226 SEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKRRCRDYDER 285
S Y ++ ST+TVIAP HH NTTESWS ++ + NS+ R PK+RCRDYDE+
Sbjct: 243 SGHYP--VPTLSSTITVIAPTHHGNNTTESWSEFHEDQVDHNSYVRPPMPKKRCRDYDEK 300
Query: 286 GFCVLGDLCQFDHGNDPLVVDEVALPSMIPFP--------PPPPGLPPP-----PPPGML 332
GFC+ GD+C FDHG+DP+VV++V LP M+PFP PPPPGLPPP PPP L
Sbjct: 301 GFCMRGDMCPFDHGSDPVVVEDVNLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPVNL 360
Query: 333 MPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLIN 392
PP+P PGP P P P GP P P PP+ Q S ++
Sbjct: 361 RPPVPPPGPLP-PSLPPVTGPPP-------------------------PLPPL-QPSGMD 393
Query: 393 SRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLL 452
+ TS+VP + + G PP PP L
Sbjct: 394 APPNSATSSVPTVVTTGIHHQPP------------------------------PAPPSLF 423
Query: 453 AARLVPPRNLMGSSIGYHTSVSSP-TPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRT 511
A Y T +P P + +T P YR R
Sbjct: 424 TADT------------YDTDGYNPEAPSITNTSRP----------------MYRH---RV 452
Query: 512 QTQRPNLIGLTSGDMDVNPRAANIVIQTEPPVPVSINSNITRVVLEPDSRKRAM-SGLEG 570
QRPNLIGLTSGDMD+ PR +PP N + R+V++ +SRKR + SG G
Sbjct: 453 HAQRPNLIGLTSGDMDLPPR-------EKPP-----NKSSMRIVVDSESRKRTIGSGEPG 500
Query: 571 PLTKKPWLGKQGNNNQNKPGFLRKNQY--TNTKLEVKKIPQELNNITKLNEHFSKFGTIV 628
TKK W K N N PGF +K Q+ NTKLE++K+P ELNNI+KLNEHFS+FGT+V
Sbjct: 501 VPTKKTWFDKPNFNRTNSPGFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLV 560
Query: 629 NIQVAFKGDPEAALIQYLTNEEARKAISSTEAVLNNRFIRVLWHRENNEQPTLQSSAQLL 688
N+QVA+ GDPE ALIQ+ T EEA+KAISSTEAVLNNRFI+V WHRE +
Sbjct: 561 NLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHREGS------------ 608
Query: 689 LQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSAPSTVHGGIQKMMSKPQTSGAYVLNKVPV 748
QQ QT S P+ L QQ +L + K V
Sbjct: 609 TQQLQTTS---------PKPLVQQPIL--------------------------PVVKQSV 633
Query: 749 KHRLGHAGGNQSDASHLLNQSGGAGEDCQIFSTPGHPKMIYSSSNLKTPSK-LCSGSKSH 807
K RLG + + + QS + + ++ G K +Y+ + LK K L + +
Sbjct: 634 KERLGPVPSSTIEPAEA--QSASSDLPQVLSTSTGLTKTVYNPAALKAAQKTLLVSTSAV 691
Query: 808 DVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIECQKMLISKLEKNKNMKPEERANIMKTLK 867
D E KKKQEA+KLQQD+RK++QE+LEK IE QKMLISKLEKNK MK E++A IMKTL+
Sbjct: 692 DNNEAQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMKSEDKAEIMKTLE 751
Query: 868 ELGEKISQLKDELKTSS-AVSTPSKVKTKTEAQKELLDTELDLHKRLSSGEDTTELRKKL 926
L + I++LKDE+K +S P +KTKT+ QKELLDTELDL+K++ +GE+ TELR+K
Sbjct: 752 VLTKNITKLKDEVKAASPGRCLPKSIKTKTQMQKELLDTELDLYKKMQAGEEVTELRRKY 811
Query: 927 SQLQVEAARLGILPVGRGKTMSSQGRG--RGRGRG-GRGRGSLNHMVVDHRPKALTVGGF 983
++LQ+EAA+ GIL GRG+ + S+GRG GRGRG GRGRG H VVDHRP+AL + F
Sbjct: 812 TELQLEAAKRGILSSGRGRGIHSRGRGAVHGRGRGRGRGRGVPGHAVVDHRPRALEISAF 871
Query: 984 IEEEKEDLLQHF-----------------------------STANQGPKFKDRRLQISWH 1014
E ++EDLL HF + A G +FK + L+++W+
Sbjct: 872 TESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGARFKGQDLKLAWN 931
Query: 1015 KPKVPSISTETEEEEVKEEETETSDLF---LPDDDDEDEDEYESRSWRR 1060
KP + ETEE E EEE + L L DDDE+E++ ESRSWRR
Sbjct: 932 KPVTNISAVETEEVEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR 980
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 78.2 bits (191), Expect = 4e-14
Identities = 110/482 (22%), Positives = 170/482 (35%), Gaps = 67/482 (13%)
Query: 80 LLEPVKPEPKPLVQEKEEIKEEVFQEPAE-EERDGRKKKYPSPQKTRSESSERRTREKKR 138
L +P + +PK ++K+E K+E + E EE K K P P+KT+ +S KK
Sbjct: 528 LSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKE 587
Query: 139 EDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEH 198
YE E + K S + R LS ++ G R + ++
Sbjct: 588 PAPMKSKPPPTYESEEEDKCK-------PMSYEEKRQLSLDINKLPGEKLGRVVHI-IQS 639
Query: 199 RERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGA-----QSIPSTVTVIAPAHHSE--N 251
RE S S +++E + + E+Y + + V VIA + + +
Sbjct: 640 REPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFS 699
Query: 252 TTESWSNYYNNHSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALP 311
++ES S+ ++ S S + PK + + + R H + + +P
Sbjct: 700 SSESESSSESSSSDSEDSETEMAPKSKKKGHPGRE-----QKKHHHHHHQQMQQAPAPVP 754
Query: 312 SMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQ 371
PPPPP PPPPPP P P P P P P + VP Q
Sbjct: 755 QQ---PPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQ 811
Query: 372 PPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMY 431
P SV PI G P L LPP LPQ P +
Sbjct: 812 LPGSVFDPI-----------------GHFTQPILHLPQPELPPHLPQ----PPEHSTPPH 850
Query: 432 SREHGAAASERLQLGTPP----PLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEP- 486
+H + L P P A +PP+ ++ + + P P P
Sbjct: 851 LNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQ 910
Query: 487 ---DGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIVIQTEPPV 543
+ P AP +TS Y Q + Q P L ++ +Q++PP
Sbjct: 911 VLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLL--------------PSVKVQSQPPP 956
Query: 544 PV 545
P+
Sbjct: 957 PL 958
Score = 51.6 bits (122), Expect = 4e-06
Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 27/211 (12%)
Query: 310 LPSMIPFPPPPPGLPPPPPPG----MLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRL-- 363
LPS+ PPP LPPPP P + P P P P P P P P P P H +
Sbjct: 945 LPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQF 1004
Query: 364 -------PVPQGH--GQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPP 414
P PQG PPP P P+P Q + + + P P
Sbjct: 1005 STHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPS 1064
Query: 415 PLP---------QNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGS 465
PL Q+L + +Q + ++ A+ +Q P PL+ + + +
Sbjct: 1065 PLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQ---PQPLVVVKEEKIHSPIIR 1121
Query: 466 SIGYHTSVSSPTPLVPDTYEPDGYNPEAPSI 496
S + S+ P P++ + + P+ P +
Sbjct: 1122 SEPFSPSLRPEPPKHPESIKAPVHLPQRPEM 1152
Score = 43.1 bits (100), Expect = 0.001
Identities = 51/181 (28%), Positives = 64/181 (35%), Gaps = 30/181 (16%)
Query: 318 PPPPGLPP------PPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQ 371
PP P LP PPPP +PP P P P P P P P P PQ Q
Sbjct: 940 PPTPLLPSVKVQSQPPPP---LPPPPHPSVQQQLQQQPPPPPPPQP-----QPPPQQQHQ 991
Query: 372 PPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVS------ 425
PPP P+ P+ S+ I P P+ G + PPP P +
Sbjct: 992 PPPR---PVHLQPMQFSTHIQQPPPPQGQQPPH-PPPGQQPPPPQPAKPQQVIQHHHSPR 1047
Query: 426 -ERQPMYSREHGAAASERLQLGTPP----PLLAARLVPPRNLMGSSIGYH-TSVSSPTPL 479
+ YS H A L + +P L + P +N+ SV P PL
Sbjct: 1048 HHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPL 1107
Query: 480 V 480
V
Sbjct: 1108 V 1108
Score = 39.7 bits (91), Expect = 0.015
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 9/118 (7%)
Query: 302 PLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSM 361
P+ + + + I PPPP G PP PP PP P P P P H
Sbjct: 996 PVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAK-----PQQVIQHHHSPRHHK 1050
Query: 362 RLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRLPPPL 416
P GH + PS ++ I P ++Q + + P + P L + P PL
Sbjct: 1051 SDPYSTGHLREAPSPLM-IHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPL 1107
Score = 38.1 bits (87), Expect = 0.044
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPP 374
PFP P L P ++PP P P P P P P P P P P PV Q P
Sbjct: 224 PFPAVTPDLIVQTPVMTVVPPQPLQTPPPVP-PQPQPPPAPAP-----QPV-----QSHP 272
Query: 375 SVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLP 417
++ P+P T+ + D + + + PP LP
Sbjct: 273 PIIAATPQPVKTKKGVKRKADTTTPTTIDPIHE-----PPSLP 310
Score = 38.1 bits (87), Expect = 0.044
Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 16/144 (11%)
Query: 308 VALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQ 367
V P M PP P PPP PP PP P P P P P P + V +
Sbjct: 234 VQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQP---VKTKKGVKR 290
Query: 368 GHGQPPPSVVLPIPRPPI----TQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYT 423
P+ + PI PP +++ + R + P V P P+
Sbjct: 291 KADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEK-SSK 349
Query: 424 VSER--------QPMYSREHGAAA 439
VSE+ + M++++H A A
Sbjct: 350 VSEQLKCCSGILKEMFAKKHAAYA 373
Score = 31.6 bits (70), Expect = 4.1
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 782 PGHPKMIYSSSNLKTPSKLCSGSKSHDVQ-EVLKKKQEAMKLQQDMRKKRQEVLEKQIEC 840
P P + SS + P+K+ + S D + + ++ R +R L++Q++
Sbjct: 461 PEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKA 520
Query: 841 QKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTK 895
++ L + + KP+++ K K+ K + +E K S A P K KTK
Sbjct: 521 VHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPK-KTK 574
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 73.6 bits (179), Expect = 1e-12
Identities = 70/202 (34%), Positives = 92/202 (45%), Gaps = 43/202 (21%)
Query: 314 IPFPPPPPGL---PPPPPPGMLMPPMPGPGPGPG-PGPGPGPGPGPGPGHSMRLPVPQGH 369
IP PPP PG+ PPPP PG+ +PP P P PG G P P P PG G P + LP P G
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPP-PPPLPGAGIPPPPPLPGMGIPPAPAPPLP-PPGT 1230
Query: 370 GQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQP 429
G PPP +LP+ PP+ Q G+S +P G LPPPLP L+ + Q
Sbjct: 1231 GIPPPP-LLPVSGPPLL--------PQVGSSTLPTPQVCGF-LPPPLPSG-LFGLGMNQD 1279
Query: 430 MYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEPDGY 489
SR+ P+ R P + L + I H+ S T L+ +
Sbjct: 1280 KGSRKQ--------------PIEPCR--PMKPLYWTRIQLHSKRDSSTSLIWEKI----- 1318
Query: 490 NPEAPSITSSGRSQYRQFFSRT 511
E PSI ++ + FS+T
Sbjct: 1319 --EEPSIDC---HEFEELFSKT 1335
Score = 72.4 bits (176), Expect = 2e-12
Identities = 60/166 (36%), Positives = 72/166 (43%), Gaps = 38/166 (22%)
Query: 317 PPPPP----GLPPPPP-PGM-LMPPMPGPGPG-PGPGPGPG---PGPGPGPGHSMRLPVP 366
PPPPP G+PPPPP PG + PP P PG G P P P PG P P P PG + P P
Sbjct: 1031 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1090
Query: 367 -QGHGQPP----PSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLL 421
G G PP P V +P P PP+ + + PG P G +PPP P
Sbjct: 1091 LPGAGIPPPPPLPGVGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---- 1145
Query: 422 YTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSI 467
R+ + PPPL A + PP L G+ I
Sbjct: 1146 ------------------LPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173
Score = 72.0 bits (175), Expect = 3e-12
Identities = 64/169 (37%), Positives = 75/169 (44%), Gaps = 40/169 (23%)
Query: 314 IPFPPPPPG--LPPPPP-PGM---LMPPMPGPG-PGPGPGPGPG-PGPGPGPGHSMRLPV 365
IP PPP PG +PPPPP PG L PP+PG G P P P PG G P P P PG + P
Sbjct: 942 IPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1001
Query: 366 P-QGHGQPPPSVV----LPIPRPPITQSSLINSRDQPGTS--AVPNLASVGTRLPPPLPQ 418
P G G PPP + +P P PP+ + + PG P L G PPPLP
Sbjct: 1002 PLPGAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP- 1059
Query: 419 NLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSI 467
GA + PPPL A + PP L G+ I
Sbjct: 1060 -----------------GAG------IPPPPPLPGAGIPPPPPLPGAGI 1085
Score = 70.9 bits (172), Expect = 6e-12
Identities = 63/170 (37%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 314 IPFPPPPP--GLPPPPP-PGMLM---PPMPGPG-PGPGPGPGPG-PGPGPGPGHSMRLPV 365
IP PPP P G+PPPPP PG + PP+PG G P P P PG G P P P PG + P
Sbjct: 964 IPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1023
Query: 366 P-QGHGQPPPSVV----LPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
P G G PPP + +P P PP+ + + PG P G +PPP P
Sbjct: 1024 PLPGAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP--- 1079
Query: 421 LYTVSERQPMYSREHGAAASERLQ---LGTPPPLLAARLVPPRNLMGSSI 467
L P G L + PPPL A + PP L G+ I
Sbjct: 1080 LPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGI 1129
Score = 70.9 bits (172), Expect = 6e-12
Identities = 63/168 (37%), Positives = 74/168 (44%), Gaps = 42/168 (25%)
Query: 317 PPPPP----GLPPPPP-PGM-LMPPMPGPGPG-PGPGPGPG---PGPGPGPGHSMRLPVP 366
PPPPP G+PPPPP PG + PP P PG G P P P PG P P P PG + P P
Sbjct: 998 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1057
Query: 367 -QGHGQPPPSVV----LPIPRPPITQSSLINSRDQPGTS--AVPNLASVGTRLPPPLPQN 419
G G PPP + +P P PP+ + + PG P L VG PPPLP
Sbjct: 1058 LPGAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLP-- 1114
Query: 420 LLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSI 467
GA + PPPL A + PP L G+ I
Sbjct: 1115 ----------------GAG------IPPPPPLPGAGIPPPPPLPGAGI 1140
Score = 70.9 bits (172), Expect = 6e-12
Identities = 69/201 (34%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 317 PPPPP----GLPPPPP-PGM-LMPPMPGPGPG-PGPGPGPG---PGPGPGPGHSMRLPVP 366
PPPPP G+PPPPP PG + PP P PG G P P P PG P P P PG + P P
Sbjct: 1064 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPP 1123
Query: 367 -QGHGQPPPSVV----LPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLL 421
G G PPP + +P P PP+ + + PG P G +PPP P L
Sbjct: 1124 LPGAGIPPPPPLPGAGIP-PPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---L 1179
Query: 422 YTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTP--- 478
V P + + PPPL A + PP L G I + P P
Sbjct: 1180 PGVGIPPP--------PPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTG 1231
Query: 479 LVPDTYEPDGYNPEAPSITSS 499
+ P P P P + SS
Sbjct: 1232 IPPPPLLPVSGPPLLPQVGSS 1252
Score = 67.8 bits (164), Expect = 5e-11
Identities = 61/169 (36%), Positives = 71/169 (42%), Gaps = 40/169 (23%)
Query: 314 IPFPPPPPG----LPPPPPPGMLMPPMPGPGPG-PGPGPGPG---PGPGPGPGHSMRLPV 365
IP PPP PG LPPP P + PP P PG G P P P PG P P P PG + P
Sbjct: 953 IPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1012
Query: 366 P-QGHGQPPPSVV----LPIPRPPITQSSLINSRDQPGTS--AVPNLASVGTRLPPPLPQ 418
P G G PPP + +P P PP+ + + PG P L G PPPLP
Sbjct: 1013 PLPGAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP- 1070
Query: 419 NLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSI 467
GA + PPPL A + PP L G+ I
Sbjct: 1071 -----------------GAG------IPPPPPLPGAGIPPPPPLPGAGI 1096
Score = 65.5 bits (158), Expect = 3e-10
Identities = 75/278 (26%), Positives = 100/278 (35%), Gaps = 82/278 (29%)
Query: 218 VSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNNHSSSNSFGRNLPPKR 277
+S PPP S +S+G Q P + P H ++ + + + NS PP
Sbjct: 807 ISQPPPPPSLLWSAG-QGQPGS----QPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPL 861
Query: 278 RCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPGLP------------P 325
C + ++P + PPPPP LP P
Sbjct: 862 PCTESSS------------------------SMPGLGMVPPPPPPLPGMTVPTLPSTAIP 897
Query: 326 PPPP---GMLMPPMPGPGPGPG-PGPGPGPGPG-------PGPGHSMRLPVPQGHGQPPP 374
PPP ++PP P P PG G P P P PG G PG G P+P PPP
Sbjct: 898 QPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPP 957
Query: 375 SVV---LPIPRPPITQSSLINSRDQPGTS--AVPNLASVGTRLPPPLPQNLLYTVSERQP 429
+ +P+P PP+ + + PG P L G PPPLP
Sbjct: 958 PLPGAGIPLP-PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP------------ 1004
Query: 430 MYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSI 467
GA + PPPL A + PP L G+ I
Sbjct: 1005 ------GAG------IPPPPPLPGAGIPPPPPLPGAGI 1030
Score = 30.8 bits (68), Expect = 7.1
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 17/98 (17%)
Query: 322 GLPPPPPPGMLMPPMPGPGPGP-----GPGPGPGPGPGPGPGHSMRLPV----------- 365
G P P + P PG G GP G G PG P L
Sbjct: 228 GAEEPAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPG-SPDTEQALSALSDLPESLAAE 286
Query: 366 PQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVP 403
P+ QPP LP+ P ++ ++D P ++A P
Sbjct: 287 PREPQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFP 324
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 71.2 bits (173), Expect = 5e-12
Identities = 56/188 (29%), Positives = 70/188 (37%), Gaps = 29/188 (15%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPV--PQGHGQP 372
P PP P LPPPPP G+ +PPMP GP P PGP P P PG PV P G
Sbjct: 243 PRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLP---PPLPQNLLYTVSERQP 429
PP+ + P P + P P + V P PP P P
Sbjct: 303 PPAPGVHPPAPGV---------HPPAPGVHPPTSGVHPPAPGVHPPAP--------GVHP 345
Query: 430 MYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEP-DG 488
H A G PP P + + G H + + P P + P G
Sbjct: 346 PAPGVHPPAP------GVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG 399
Query: 489 YNPEAPSI 496
+P+AP +
Sbjct: 400 MHPQAPGV 407
Score = 43.1 bits (100), Expect = 0.001
Identities = 36/95 (37%), Positives = 38/95 (40%), Gaps = 22/95 (23%)
Query: 310 LPSMIPFPPPPPGLP-----PPPPPGM-------------LMPPMPGPGPGPGPGPGPGP 351
LP M P P P G P PPP PG+ + PP PG P P PG P P
Sbjct: 261 LPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHP-PAPGVHP-P 318
Query: 352 GPGPGPGHSMRLPVPQGHGQPPPSVVLPIP--RPP 384
PG P S P G P P V P P PP
Sbjct: 319 APGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353
Score = 40.4 bits (93), Expect = 0.009
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Query: 311 PSMIPFPPPPPGL--------PPPPPPGMLMPPMPGPGPGPGPGPGP 349
PS P PPG+ PP P P ML PP+P GPG P P P
Sbjct: 416 PSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
Score = 37.7 bits (86), Expect = 0.058
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 318 PPPPGLPPPPPPGMLMPPMPGPGPGPGPG---PGPGPGPGPGPGHSMRLPVPQGHGQPPP 374
P PG+ PP P + P PG P P PG PG P P H P G PP
Sbjct: 388 PQAPGVHPPAPG--MHPQAPGVHPQP-PGVHPSAPGVHPQPPGVH------PSNPGVHPP 438
Query: 375 SVVLPIPRPPITQSSLINSRDQPGTS 400
+ + P+ RPP+ N P T+
Sbjct: 439 TPMPPMLRPPLPSEGPGNIPPPPPTN 464
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 65.9 bits (159), Expect = 2e-10
Identities = 63/185 (34%), Positives = 68/185 (36%), Gaps = 44/185 (23%)
Query: 311 PSMIPFPPPPPG-LPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPG-PGPGHSMRLPVPQG 368
P P P PPPG LPP PP M PPMP G GP PG G PG GHS P P G
Sbjct: 240 PGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPG 299
Query: 369 -----------------------HGQPPPSVVLPIPRPPITQSSL------INSRDQPGT 399
H PP S P PRPP + R P
Sbjct: 300 GMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFG 359
Query: 400 SAVPN---LASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAAR- 455
S + + + G R PPPL YT R P Y + G PPP R
Sbjct: 360 SPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGP---------LPPPRPTPRP 410
Query: 456 LVPPR 460
VPPR
Sbjct: 411 PVPPR 415
Score = 42.7 bits (99), Expect = 0.002
Identities = 27/60 (45%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 315 PFPPPPPGL--PPP--PPPGMLMPPMPGP---GPGPGPGPGPGPGPGPGPGHSMRLPVPQ 367
P P PP G+ PPP PP G PP P P GP P P P P P P +R P+PQ
Sbjct: 365 PGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRGPLPQ 424
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 65.5 bits (158), Expect = 3e-10
Identities = 37/88 (42%), Positives = 39/88 (44%), Gaps = 25/88 (28%)
Query: 311 PSMIPFPPP-----PPGLPPPPPPGMLMP----------PMPGPGPGPGPGPGPGPGP-- 353
P P PPP PPG PPP PP +P P P PGPGPGP GPGP
Sbjct: 147 PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGG 206
Query: 354 --------GPGPGHSMRLPVPQGHGQPP 373
GP PG L P GH +PP
Sbjct: 207 PKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/115 (33%), Positives = 41/115 (35%), Gaps = 10/115 (8%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGP--------GPGPGPGPGPGPGPGPGHSMR 362
P P P PP PPP P P P P GPGP PG G P S
Sbjct: 73 PPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Query: 363 LPVPQGHGQPPPSVVLPIPRPP--ITQSSLINSRDQPGTSAVPNLASVGTRLPPP 415
P G PP S P P PP +T + P +S VP PPP
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPP 187
Score = 52.8 bits (125), Expect = 2e-06
Identities = 44/162 (27%), Positives = 56/162 (34%), Gaps = 32/162 (19%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLP------ 364
P + P P PG+ PP PP P G PG GPGP P P P + P
Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPT 168
Query: 365 ---------VPQGHGQPPPSVVLPIPRPPITQ--------SSLINSRDQPGTSAVPNLAS 407
PQ G PPP +P P P Q + +PG P L++
Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG--PGLST 226
Query: 408 VGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPP 449
G PP +P R+H ++ G PP
Sbjct: 227 PGGHPKPP-------HRGGGEPRGGRQHHPPYHQQHHQGPPP 261
Score = 48.5 bits (114), Expect = 3e-05
Identities = 58/174 (33%), Positives = 66/174 (37%), Gaps = 44/174 (25%)
Query: 327 PPPGMLMPPMPGP-GPGPGP-GPGPGPGPGPGPGHSMRLPVPQGHG--QPPPSVVLPIPR 382
PPPGM + GP GPGPG GP P P P P P + P PQ QPPP P P+
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKP-PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQ 92
Query: 383 PPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAA--AS 440
P Q PPP PQ+ V + P + G+A AS
Sbjct: 93 PHQQQQ------------------------PPPPPQDSSKPVVAQGPGPAPGVGSAPPAS 128
Query: 441 ERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEPDGYNPEAP 494
TPP A PP GS G +PTP T P G P P
Sbjct: 129 SSAPPATPPTSGA----PP----GSGPG-----PTPTPPPAVTSAPPGAPPPTP 169
Score = 42.0 bits (97), Expect = 0.003
Identities = 44/160 (27%), Positives = 52/160 (32%), Gaps = 21/160 (13%)
Query: 316 FPPPPPGL-------PPPPPPGMLMPPMPGPGPGPG-----PGPGPGPGPGPGPGHSMRL 363
F PPPG+ P P PG P P P P P P P P P P
Sbjct: 31 FRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPH 90
Query: 364 PVPQGHGQPPP-------SVVL--PIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPP 414
P P QPPP VV P P P + + +S P T P
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT 150
Query: 415 PLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAA 454
P P + + P + + Q G PPP AA
Sbjct: 151 PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAA 190
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 65.1 bits (157), Expect = 3e-10
Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 307 EVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGP--------- 357
++A+ P P +P PPP + GPGPGPGPGPGPGPGP P
Sbjct: 201 QMAVQGKRPMPGMQQQMPTLPPPSV-----SATGPGPGPGPGPGPGPGPAPPNYSRPHGM 255
Query: 358 -GHSMRLPVPQG-----HGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTR 411
G +M P P G GQPP P P P+ ++ S Q P T
Sbjct: 256 GGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQP------TG 309
Query: 412 LPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHT 471
P P P + S P ++ G A P P+ + H
Sbjct: 310 RPSPAPPAVPPAASPVMPPQTQSPGQPAQ-------PAPM---------------VPLHQ 347
Query: 472 SVSSPTPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNP- 530
S TP+ +P G +P R Q R + + NL G +GD+
Sbjct: 348 KQSRITPI----QKPRGLDPVEILQEREYRLQAR--IAHRIQELENLPGSLAGDLRTKAT 401
Query: 531 ------RAANIVIQTEPPVPVSINSNI---TRVVLEPDSRKRAMSGLEGPLTKKPWLGKQ 581
R N Q V V + + T + + R + S E +T+K L KQ
Sbjct: 402 IELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEK--LEKQ 459
Query: 582 GNNNQNKPGFLRKNQYTNTKLEVKK 606
Q + + +Y N+ L+ K
Sbjct: 460 QKIEQERKRRQKHQEYLNSILQHAK 484
Score = 58.2 bits (139), Expect = 4e-08
Identities = 32/63 (50%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P L P PG P PGPGP PG GP PGP PG HSM P P PPS
Sbjct: 4 PDPPLGGTPRPG----PSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSP-----GPPSAGH 54
Query: 379 PIP 381
PIP
Sbjct: 55 PIP 57
Score = 49.3 bits (116), Expect = 2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPG-PGPGPGPGPGPGHSMRLPVP-QGHGQP 372
P P P PG P P PG ++ P PGP PG GP PGP P GH P+P QG G
Sbjct: 12 PRPGPSPG--PGPSPGAMLGPSPGPSPGSAHSMMGPSPGP-PSAGH----PIPTQGPGGY 64
Query: 373 PPSVVLPIPRPPITQSSLINSRDQPGTSAVP---NLASVGTRL-------PPPLPQNLLY 422
P + + +P + S + G S P + +G R PPP P + +
Sbjct: 65 PQDNMHQMHKP-------MESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMD-QH 116
Query: 423 TVSERQPMYSREHGAA 438
+ P+ EH ++
Sbjct: 117 SQGYPSPLGGSEHASS 132
Score = 36.6 bits (83), Expect = 0.13
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 336 MPGPGPGPGPGPGPGPGPGPGPGHSMRL-PVPQGHGQPPPSVVLPIPRPP 384
M P P G P PGP PGPGP L P P S++ P P PP
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPP 50
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 65.1 bits (157), Expect = 3e-10
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 25/126 (19%)
Query: 317 PPPPPGLPPPP--PPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLP-----VPQGH 369
P P P P P P + PGPGPGPGPGPGPGPG GPG + L + H
Sbjct: 150 PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHH 209
Query: 370 GQPP--------PSVVLPIPR----------PPITQSSLINSRDQPGTSAVPNLASVGTR 411
P P+ +LP+P+ PP ++ + P A P A+
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAA 269
Query: 412 LPPPLP 417
PPP P
Sbjct: 270 PPPPPP 275
Score = 48.1 bits (113), Expect = 4e-05
Identities = 42/137 (30%), Positives = 51/137 (37%), Gaps = 34/137 (24%)
Query: 309 ALPSMIPFPPPP--------PGLPPPPPPGMLMPPMPGP---GPGPGPGPGPGPGPG--- 354
A P+ P PPPP PG P PP P P G G P P P G
Sbjct: 264 AAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPA 323
Query: 355 -----PGPGHSMRLPVPQGHGQPPPSVVLPIP---------RPPITQSSLINSRDQPGTS 400
PGPG + P P + P VV P P T +S++ G
Sbjct: 324 GVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQG-- 381
Query: 401 AVPNLASVGTRLPPPLP 417
A+P+ A+V PPP P
Sbjct: 382 ALPSPAAV----PPPAP 394
Score = 42.4 bits (98), Expect = 0.002
Identities = 64/262 (24%), Positives = 86/262 (32%), Gaps = 40/262 (15%)
Query: 303 LVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMR 362
L + + A P + PP G PP P P P P P P P P P
Sbjct: 226 LPLPKPAAPGTVIQTPPFVGAAAPPAPA-----APSPPAAPAPA-APAAAPPPPPPAPAT 279
Query: 363 LPVPQGHGQPPPSVVLPIPRPPITQS-SLINSRDQP-----GTSAVPNLASVGTRLPPPL 416
L P GH PP+ +P P Q+ + P G + V G P
Sbjct: 280 LARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPA 339
Query: 417 PQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSP 476
P V P + A++ L P A+ ++ P M ++ +V P
Sbjct: 340 P-----GVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP--TMQGALPSPAAVPPP 392
Query: 477 TPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIV 536
P P T P G A ++T S SRT T TSG + V
Sbjct: 393 APGTP-TGLPKG---AAGAVTQS--------LSRTPT------ATTSG---IRATLTPTV 431
Query: 537 IQTEPPVPVSINSNITRVVLEP 558
+ P P +NI L P
Sbjct: 432 LAPRLPQPPQNPTNIQNFQLPP 453
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 63.9 bits (154), Expect = 8e-10
Identities = 76/307 (24%), Positives = 113/307 (36%), Gaps = 60/307 (19%)
Query: 91 LVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDGKWRDYDRYY 150
L ++ ++ +V P++EE + ++++ Q+ + ER RE+ + R+
Sbjct: 120 LPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERER---L 176
Query: 151 ERNELYREKYDWR--------RGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRERS 202
ER L RE+ + R R + + L R R DR+ E
Sbjct: 177 ERERLERERLEQEQLERERQERERQERLERQERLERQERLERQERLDRERQERQERERLE 236
Query: 203 KFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNN 262
+ + ER + E E+ S A APA + E+ N
Sbjct: 237 RLERERQERERQEQLEREQLEWERERRISSAA---------APA-----SVETPLNSVLG 282
Query: 263 HSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPG 322
SS++ G L + + + VLG L PPPPP
Sbjct: 283 DSSASEPG--LQAASQPAETPSQQGIVLGPLA----------------------PPPPPP 318
Query: 323 LPP-PPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIP 381
LPP P + +PP PGP P P P P GP P P P P+P PPP P P
Sbjct: 319 LPPGPAQASVALPPPPGP-PPPPPLPSTGPPPPPPPP-----PLPNQVPPPPP----PPP 368
Query: 382 RPPITQS 388
PP+ S
Sbjct: 369 APPLPAS 375
Score = 34.7 bits (78), Expect = 0.49
Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 321 PGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGH-SMRLPVPQGHGQPPPSVVLP 379
PGL P P G GP P P P P PGP S+ LP P G PPP LP
Sbjct: 289 PGLQAASQPAET-PSQQGIVLGPLAPPPPPPLP-PGPAQASVALPPPPGPPPPPP---LP 343
Query: 380 IPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLP 417
PP P +PN ++PPP P
Sbjct: 344 STGPP----------PPPPPPPLPN------QVPPPPP 365
Score = 34.3 bits (77), Expect = 0.64
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 310 LPSMIPFPPPPPGLPPPPPPGMLMPPM 336
LP+ +P PPPPP PP P G + M
Sbjct: 356 LPNQVPPPPPPPPAPPLPASGFFLASM 382
Score = 32.3 bits (72), Expect = 2.4
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 81 LEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSER--------R 132
+E + E + L +E+ E +E + QE E ER R+++ ++ R E ER R
Sbjct: 166 MERERLERERLERERLE-RERLEQEQLERERQERERQERLERQERLERQERLERQERLDR 224
Query: 133 TREKKREDGKWRDYDRYYERNE----LYREKYDWRRGR 166
R++++E + +R + E L RE+ +W R R
Sbjct: 225 ERQERQERERLERLERERQERERQEQLEREQLEWERER 262
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 63.9 bits (154), Expect = 8e-10
Identities = 76/307 (24%), Positives = 113/307 (36%), Gaps = 60/307 (19%)
Query: 91 LVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDGKWRDYDRYY 150
L ++ ++ +V P++EE + ++++ Q+ + ER RE+ + R+
Sbjct: 120 LPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERER---L 176
Query: 151 ERNELYREKYDWR--------RGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRERS 202
ER L RE+ + R R + + L R R DR+ E
Sbjct: 177 ERERLERERLEQEQLERERQERERQERLERQERLERQERLERQERLDRERQERQERERLE 236
Query: 203 KFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNN 262
+ + ER + E E+ S A APA + E+ N
Sbjct: 237 RLERERQERERQEQLEREQLEWERERRISSAA---------APA-----SVETPLNSVLG 282
Query: 263 HSSSNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPG 322
SS++ G L + + + VLG L PPPPP
Sbjct: 283 DSSASEPG--LQAASQPAETPSQQGIVLGPLA----------------------PPPPPP 318
Query: 323 LPP-PPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIP 381
LPP P + +PP PGP P P P P GP P P P P+P PPP P P
Sbjct: 319 LPPGPAQASVALPPPPGP-PPPPPLPSTGPPPPPPPP-----PLPNQVPPPPP----PPP 368
Query: 382 RPPITQS 388
PP+ S
Sbjct: 369 APPLPAS 375
Score = 34.7 bits (78), Expect = 0.49
Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 22/98 (22%)
Query: 321 PGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGH-SMRLPVPQGHGQPPPSVVLP 379
PGL P P G GP P P P P PGP S+ LP P G PPP LP
Sbjct: 289 PGLQAASQPAET-PSQQGIVLGPLAPPPPPPLP-PGPAQASVALPPPPGPPPPPP---LP 343
Query: 380 IPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLP 417
PP P +PN ++PPP P
Sbjct: 344 STGPP----------PPPPPPPLPN------QVPPPPP 365
Score = 34.3 bits (77), Expect = 0.64
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 310 LPSMIPFPPPPPGLPPPPPPGMLMPPM 336
LP+ +P PPPPP PP P G + M
Sbjct: 356 LPNQVPPPPPPPPAPPLPASGFFLASM 382
Score = 32.3 bits (72), Expect = 2.4
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 81 LEPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSER--------R 132
+E + E + L +E+ E +E + QE E ER R+++ ++ R E ER R
Sbjct: 166 MERERLERERLERERLE-RERLEQEQLERERQERERQERLERQERLERQERLERQERLDR 224
Query: 133 TREKKREDGKWRDYDRYYERNE----LYREKYDWRRGR 166
R++++E + +R + E L RE+ +W R R
Sbjct: 225 ERQERQERERLERLERERQERERQEQLEREQLEWERER 262
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 63.9 bits (154), Expect = 8e-10
Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 23/257 (8%)
Query: 309 ALPSMIPFPPPPPGLPPPP--PPGMLMPPMPGPGPGPGPGP-GPGPGPGPGPGHSMRLPV 365
A S +P PP P PPP PP + +PP+ P P P P P P +++ + +
Sbjct: 376 ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 435
Query: 366 PQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVS 425
Q PPPS + P P S ++ P + A P+LA+ ++PP P + + S
Sbjct: 436 LQAPFSPPPSPPVQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 494
Query: 426 ERQPMYSREHGAAASERLQLGTPPPL---------LAARLVPPRNLMGSSIGYHTSVSSP 476
P + A+ LQL PPP L A PP + G + S S+
Sbjct: 495 ATPP--PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA---PFSPSAS 549
Query: 477 TPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQT-QRPNLIGLTSGDMDVNPRAANI 535
P+ P P P+AP + ++ Q + T Q P D V+ +
Sbjct: 550 LPMSPLATPP----PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 536 VIQTEPPVPVSINSNIT 552
+ PP P S + + T
Sbjct: 606 ALAPGPPPPPSRSPSST 622
Score = 43.9 bits (102), Expect = 8e-04
Identities = 50/194 (25%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 302 PLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSM 361
P V PS P P L PP P P P P P P P P +
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP-----PPQAPPPLAAPPLQL 512
Query: 362 RLPVPQGHGQPPPSVVLP----IPRPPI----------TQSSLINSRDQPGTSAVPNLAS 407
P PQ PP++ P +P PP + S ++ P A P LA+
Sbjct: 513 AKPPPQA----PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 568
Query: 408 VGTRLPPPLPQNLLYTVSERQPMYSRE---HGAAASERLQLGTPPPLLAARLVPPRNLMG 464
++PP P + R P + G + L G PPP + P L G
Sbjct: 569 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS---PSSTLSG 625
Query: 465 SSIGYHTSVSSPTP 478
+ H+S ++ TP
Sbjct: 626 PDLAGHSSSATSTP 639
Score = 37.7 bits (86), Expect = 0.058
Identities = 53/194 (27%), Positives = 63/194 (32%), Gaps = 49/194 (25%)
Query: 318 PPPPGLPPPPPP-----------------GMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS 360
P PPG P PPPP L G G P P GP G S
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTS 86
Query: 361 MRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
R P + PP+ PP +S PG + P AS GT P PL Q
Sbjct: 87 SRNPASR-----PPASGRGERAPPAKNTS-------PGPVSSPGRAS-GTTRPGPLGQKG 133
Query: 421 LYTVSERQPMYSREHGAAASERLQL-------------GTPPPLLAARLVPPRNLMGSSI 467
L +E +R A +R L GTP P +A R G+ +
Sbjct: 134 LRISAEE--TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR----SRAAGTEV 187
Query: 468 GYHTSVSSPTPLVP 481
G S P P
Sbjct: 188 GLPRPAPSARPRPP 201
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 63.9 bits (154), Expect = 8e-10
Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 23/257 (8%)
Query: 309 ALPSMIPFPPPPPGLPPPP--PPGMLMPPMPGPGPGPGPGP-GPGPGPGPGPGHSMRLPV 365
A S +P PP P PPP PP + +PP+ P P P P P P +++ + +
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 396
Query: 366 PQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVS 425
Q PPPS + P P S ++ P + A P+LA+ ++PP P + + S
Sbjct: 397 LQAPFSPPPSPPVQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 455
Query: 426 ERQPMYSREHGAAASERLQLGTPPPL---------LAARLVPPRNLMGSSIGYHTSVSSP 476
P + A+ LQL PPP L A PP + G + S S+
Sbjct: 456 ATPP--PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA---PFSPSAS 510
Query: 477 TPLVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQT-QRPNLIGLTSGDMDVNPRAANI 535
P+ P P P+AP + ++ Q + T Q P D V+ +
Sbjct: 511 LPMSPLATPP----PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 566
Query: 536 VIQTEPPVPVSINSNIT 552
+ PP P S + + T
Sbjct: 567 ALAPGPPPPPSRSPSST 583
Score = 43.9 bits (102), Expect = 8e-04
Identities = 50/194 (25%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 302 PLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSM 361
P V PS P P L PP P P P P P P P P +
Sbjct: 419 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP-----PPQAPPPLAAPPLQL 473
Query: 362 RLPVPQGHGQPPPSVVLP----IPRPPI----------TQSSLINSRDQPGTSAVPNLAS 407
P PQ PP++ P +P PP + S ++ P A P LA+
Sbjct: 474 AKPPPQA----PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529
Query: 408 VGTRLPPPLPQNLLYTVSERQPMYSRE---HGAAASERLQLGTPPPLLAARLVPPRNLMG 464
++PP P + R P + G + L G PPP + P L G
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS---PSSTLSG 586
Query: 465 SSIGYHTSVSSPTP 478
+ H+S ++ TP
Sbjct: 587 PDLAGHSSSATSTP 600
Score = 37.4 bits (85), Expect = 0.076
Identities = 51/190 (26%), Positives = 63/190 (33%), Gaps = 50/190 (26%)
Query: 318 PPPPGLPPPPPP-------------GMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLP 364
P PPG P PPPP + P+ G G P P GP + R P
Sbjct: 27 PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSR-P 85
Query: 365 VPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTV 424
G G+ PP +S PG + P AS GT P PL Q L
Sbjct: 86 PASGRGE---------RAPPAKNTS-------PGPVSSPGRAS-GTTRPGPLGQKGLRIS 128
Query: 425 SERQPMYSREHGAAASERLQL-------------GTPPPLLAARLVPPRNLMGSSIGYHT 471
+E +R A +R L GTP P +A R G+ +G
Sbjct: 129 AEE--TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR----SRAAGTEVGLPR 182
Query: 472 SVSSPTPLVP 481
S P P
Sbjct: 183 PAPSARPRPP 192
Score = 33.1 bits (74), Expect = 1.4
Identities = 44/163 (26%), Positives = 57/163 (34%), Gaps = 26/163 (15%)
Query: 320 PPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHS--MRLPVPQGHGQPPPSVV 377
P P P PP G G P PGP PG + P P G S
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 378 LPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGA 437
+ R T++ P SA+ S G R P T P +R A
Sbjct: 131 ETVARGKATEA--------PKRSAL----SAGARRDTSGP-----TPGTPSPAMARRSRA 173
Query: 438 AASERLQLGTPPPLLAARLVP----PRNLMGSSIGYHTSVSSP 476
A +E +G P P +AR P PR + S+ + T+ SP
Sbjct: 174 AGTE---VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSP 213
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 63.9 bits (154), Expect = 8e-10
Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 308 VALPSMIP--FP-PPPPGLPPPPPPGMLMPPMPGPGPG-PGPGPGPGPGPGPGPGHSMRL 363
VA PS++ P PPPPG PP PPP PP P P PG P P P P P P P P H
Sbjct: 669 VAAPSVLAPTLPLPPPPGFPPLPPP----PPPPPPQPGFPMPPPLPPPPPPPPPAHPAVT 724
Query: 364 ----PVPQGHGQPPPSVVLPIPRPP 384
P+P G PPP ++ P+P P
Sbjct: 725 VPPPPLPAPPGVPPPPILPPLPPFP 749
Score = 43.9 bits (102), Expect = 8e-04
Identities = 106/497 (21%), Positives = 177/497 (35%), Gaps = 100/497 (20%)
Query: 82 EPVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDG 141
E K +PK + + + EE+ +K+ S ++ +E E E++ ED
Sbjct: 1008 ELAKRDPKGVGVRRRPARPLELDSGGEED----EKESLSEEQESTEEEEEAEEEEEEEDD 1063
Query: 142 KWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRER 201
D D R S++ + LS + + G S + + V +
Sbjct: 1064 DDDDSDD---------------RDESENDDEDTALSEASEKDEGDSDEEETVSIVTSKAE 1108
Query: 202 SKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYN 261
+ SE ++ S + S P+SSE V+A E E +
Sbjct: 1109 ATSSSESSE-SSEFESSSESSPSSSEDEEE----------VVAREEEEEEEEEEMVAEES 1157
Query: 262 NHSSSNSFGRNLPPKRRCRDYDERGFCV-------LGDLCQFDHGNDPLVVDEVALPSMI 314
S+ P+ +D +E LG + D + + +E PSM+
Sbjct: 1158 MASAG--------PEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEE--RPSML 1207
Query: 315 PFPPPPPGL-------PPPPPPG------MLMPPMPGPGPGPGPGPGPGPGPGPGPGHSM 361
PP P G+ PP PG ML+ P P P P P P H +
Sbjct: 1208 DEPPLPVGVEEPADSREPPEEPGLSQEGAMLLSPEP---PAKEVEARPPLSPERAPEHDL 1264
Query: 362 RLPVPQGHGQPPPSVVLPIP-RPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
+ +P P ++LP+P +PP+ P P PP P
Sbjct: 1265 EV-------EPEPPMMLPLPLQPPLPPP---RPPRPPSPPPEPETTDASHPSVPPEP--- 1311
Query: 421 LYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLV 480
++E P ++ + ++ T P PP L G S G +S +P V
Sbjct: 1312 ---LAEDHPPHTPGLCGSLAKSQSTETVPATPGGE--PP--LSGGSSG----LSLSSPQV 1360
Query: 481 PDTYEPDGYNPEAPSITSSG--RSQYRQFFSRTQTQRPN------LIGLTSGDMD--VNP 530
P + P Y +PS++S G R+ R F P+ + L +G D P
Sbjct: 1361 PGS--PFSYPAPSPSLSSGGLPRTPGRDFSFTPTFSEPSGPLLLPVCPLPTGRRDERSGP 1418
Query: 531 RAANIVIQTEPPVPVSI 547
A+ ++++T P+P+ +
Sbjct: 1419 LASPVLLETGLPLPLPL 1435
Score = 39.7 bits (91), Expect = 0.015
Identities = 54/197 (27%), Positives = 72/197 (36%), Gaps = 34/197 (17%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGP----GPGHSMRLPVP 366
P M+P P PP LPPP PP PP P P P P P P P H+ L
Sbjct: 1271 PMMLPLPLQPP-LPPPRPP---RPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGS 1326
Query: 367 QGHGQPPPSV-VLPIPRPPITQSS---LINSRDQPGT-----SAVPNLASVGTRLPPPLP 417
Q +V P PP++ S ++S PG+ + P+L+S G P
Sbjct: 1327 LAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRD 1386
Query: 418 QNLLYTVSERQ-PMY------------SREHGAAASERLQLGTPPPLLAARLVPPRNLMG 464
+ T SE P+ R A+ L+ G P PL +P +
Sbjct: 1387 FSFTPTFSEPSGPLLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLPLP----LA 1442
Query: 465 SSIGYHTSVSSPTPLVP 481
+PTPL P
Sbjct: 1443 LPAVLRAQARAPTPLPP 1459
Score = 37.0 bits (84), Expect = 0.099
Identities = 31/97 (31%), Positives = 36/97 (37%), Gaps = 20/97 (20%)
Query: 321 PGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQ-GHGQPPPSVVLP 379
PG P +L P +P P P PG P P P P P PQ G PPP P
Sbjct: 664 PGAAAVAAPSVLAPTLPLPPP-----PGFPPLPPPPPP-----PPPQPGFPMPPPLPPPP 713
Query: 380 IPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPL 416
P PP + + P VP PPP+
Sbjct: 714 PPPPPAHPAVTVPPPPLPAPPGVP---------PPPI 741
Score = 36.2 bits (82), Expect = 0.17
Identities = 97/448 (21%), Positives = 135/448 (30%), Gaps = 96/448 (21%)
Query: 94 EKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDGKWRDYDRYYERN 153
EKE + EE QE EEE + +++ +S +R E ED + E +
Sbjct: 1037 EKESLSEE--QESTEEEEEAEEEEEEEDDDD-DDSDDRDESENDDEDTALSEASEKDEGD 1093
Query: 154 ELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRERSKFKSERNDLES 213
E ++++ S S S S S E R + + E +
Sbjct: 1094 SDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEMV 1153
Query: 214 SYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYYNNHSS-------- 265
+ +++ P EQ A P V + E E+ + S
Sbjct: 1154 AEESMASAGPEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEERPSMLDEPPLP 1213
Query: 266 ------------------SNSFGRNLPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDE 307
S L P+ ++ + R + D +P
Sbjct: 1214 VGVEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEARPPLSPERAPEHDLEVEPEPPMM 1273
Query: 308 VALPSMIPFPPPPPGLPPPPPP--------GMLMPPMP----GPGPGPG----------- 344
+ LP P PPP P PP PPP +PP P P PG
Sbjct: 1274 LPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQST 1333
Query: 345 ---PGPGPGPGPGPGPGHSMRLPVPQGHGQ----PPPSVVLP---IPRPPITQSSLINSR 394
P G P G + L PQ G P PS L +PR P S +
Sbjct: 1334 ETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTPTF 1393
Query: 395 DQP--------------------GTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSRE 434
+P G A P L G LP PLP L +
Sbjct: 1394 SEPSGPLLLPVCPLPTGRRDERSGPLASPVLLETGLPLPLPLPLPLPLALP--------- 1444
Query: 435 HGAAASERLQLGTP-PPLLAARLV--PP 459
A + + TP PPLL A L PP
Sbjct: 1445 --AVLRAQARAPTPLPPLLPAPLASCPP 1470
Score = 33.9 bits (76), Expect = 0.83
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 1022 STETEEEEVKEEETETSDLFLPDDDDEDEDEYES 1055
STE EEE +EEE E D DDD +D DE E+
Sbjct: 1047 STEEEEEAEEEEEEEDDD----DDDSDDRDESEN 1076
Score = 33.5 bits (75), Expect = 1.1
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 296 FDHGNDPLVVDEVALPSMIPFPPPP--PGLPPPPPPGMLMP------PMPGPGPGPGPGP 347
F +DP V + IP PPPP P PPPPPP + P + P P
Sbjct: 1518 FPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIPP 1577
Query: 348 GPGPGPGPGPGHSMRLPVPQGHGQPPP 374
GP G M L +G + PP
Sbjct: 1578 GP-RGRDEVTEEYMELAKSRGPWRRPP 1603
Score = 33.1 bits (74), Expect = 1.4
Identities = 34/124 (27%), Positives = 40/124 (32%), Gaps = 51/124 (41%)
Query: 310 LPSMIPFP----PPP----PGLPPPPPPGMLM-------PP-----------MPG----- 338
LP ++P P PPP PG P PP ML PP +PG
Sbjct: 1457 LPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQTP 1516
Query: 339 --------------------PGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
P P P P P P P P P +LP + Q P +
Sbjct: 1517 VFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIP 1576
Query: 379 PIPR 382
P PR
Sbjct: 1577 PGPR 1580
Score = 32.3 bits (72), Expect = 2.4
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 1025 TEEEEVKEEETETSDLFLPDDDDEDEDEYESRS 1057
TEEEE EEE E D DDDD+ +D ES +
Sbjct: 1048 TEEEEEAEEEEEEED----DDDDDSDDRDESEN 1076
Score = 30.4 bits (67), Expect = 9.2
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 310 LPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGH 369
LP P PG PP PPP P G P G P P PG P G
Sbjct: 437 LPPAEPLAKEKPGTPPGPPP----PDTNSMELGGRPTFGWSPEPCDSPGTPTLESSPAGP 492
Query: 370 GQPPPSV 376
+P S+
Sbjct: 493 EKPHDSL 499
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 2e-09
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 93 QEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDGKWRDYDRYYER 152
QE+EE ++E +E E ER R+++ +K R+ ERR R + R R DR R
Sbjct: 252 QEREEREKEREREREERERK-RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSR 310
Query: 153 NELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRERS-KFKSERNDL 211
+ ++ R RS+SR + R S RS + RS+ RD R+ +S K +S+ D
Sbjct: 311 SRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDR 370
Query: 212 ESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENT-TESWSNYYNNHSSSNS 268
E S E+ G+ S+V + SE+T TES + N + S
Sbjct: 371 EQD--------RKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTS 420
Score = 59.7 bits (143), Expect = 1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 96 EEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTRE---KKREDGKWRDYDRYYER 152
EE+KE++ + E +RD R KK ++ R + ER E K+R + + R+ +R +R
Sbjct: 228 EELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDR 287
Query: 153 NELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVE-HRERSKFKSER 208
R K R R SR+ R SRSR R RS++R +R+ + R RS +SER
Sbjct: 288 E---RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER 341
Score = 49.7 bits (117), Expect = 1e-05
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 82 EPVKPEPKPLVQEKEEIKEEVFQEPAEEERDG-------RKKKYPSPQKTRSESSERRT- 133
E + E + +E+E + E + EEER+ R+K+ S + S +S+RR
Sbjct: 250 EKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCS 309
Query: 134 ------REKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRS 187
R + RE + R DR R+ E+ R R + RSKSR R + R +S
Sbjct: 310 RSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR--DRKSYKHRSKS 367
Query: 188 KDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAH 247
+DR+ +R + +E+ +++ ++S + N+ + S + T I
Sbjct: 368 RDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTSEDI---- 423
Query: 248 HSENTTES 255
SE T+S
Sbjct: 424 KSEGDTQS 431
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 2e-09
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 93 QEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKREDGKWRDYDRYYER 152
QE+EE ++E +E E ER R+++ +K R+ ERR R + R R DR R
Sbjct: 252 QEREEREKEREREREERERK-RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSR 310
Query: 153 NELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRERS-KFKSERNDL 211
+ ++ R RS+SR + R S RS + RS+ RD R+ +S K +S+ D
Sbjct: 311 SRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDR 370
Query: 212 ESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENT-TESWSNYYNNHSSSNS 268
E S E+ G+ S+V + SE+T TES + N + S
Sbjct: 371 EQD--------RKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTS 420
Score = 59.7 bits (143), Expect = 1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 96 EEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTRE---KKREDGKWRDYDRYYER 152
EE+KE++ + E +RD R KK ++ R + ER E K+R + + R+ +R +R
Sbjct: 228 EELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDR 287
Query: 153 NELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVE-HRERSKFKSER 208
R K R R SR+ R SRSR R RS++R +R+ + R RS +SER
Sbjct: 288 E---RRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSER 341
Score = 49.7 bits (117), Expect = 1e-05
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 20/188 (10%)
Query: 82 EPVKPEPKPLVQEKEEIKEEVFQEPAEEERDG-------RKKKYPSPQKTRSESSERRT- 133
E + E + +E+E + E + EEER+ R+K+ S + S +S+RR
Sbjct: 250 EKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCS 309
Query: 134 ------REKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRS 187
R + RE + R DR R+ E+ R R + RSKSR R + R +S
Sbjct: 310 RSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR--DRKSYKHRSKS 367
Query: 188 KDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAH 247
+DR+ +R + +E+ +++ ++S + N+ + S + T I
Sbjct: 368 RDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTSEDI---- 423
Query: 248 HSENTTES 255
SE T+S
Sbjct: 424 KSEGDTQS 431
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 62.4 bits (150), Expect = 2e-09
Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 326 PPPPGMLMPPMPGPGPGPGPGP--GPGPGPGPGPG--HSMRLPVPQGHGQPPPSVVLPIP 381
P PG + P P PGPGP PGP GP PGPGP PG HSM P P PPSV P+P
Sbjct: 4 PTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSP-----GPPSVSHPMP 58
Score = 53.9 bits (128), Expect = 8e-07
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 40/145 (27%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGP-----GPGPGP----GPGPGPG--- 358
P +P P P PG P P PG ++ P PGPGP PG GP PGP P P G
Sbjct: 7 PGAMPHPGPSPG--PGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTD 64
Query: 359 ------HSMRLPVP----------------QGHGQPPPSVVLPIPRPPITQSSLINSRDQ 396
H M P+ +G G PP + P+ P+ Q S
Sbjct: 65 FPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPH 124
Query: 397 PGTSAVPNLASV----GTRLPPPLP 417
P P S G PP +P
Sbjct: 125 PSPLGAPEHVSSPMSGGGPTPPQMP 149
Score = 40.0 bits (92), Expect = 0.012
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPP---- 374
P P L P P L P PG P P P P PG S+ P P GQP P
Sbjct: 265 PGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAP---GQPSPVLQL 321
Query: 375 ----SVVLPIPRPP-ITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
S + PI +P + ++ R+ + + + LP LP +L
Sbjct: 322 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDL 372
Score = 34.7 bits (78), Expect = 0.49
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPP---MPGPG-PGPGPGPGPGPGPGPGPGHSMRLPVP 366
P +P P P G P P PP PP +PGP P P PG P P S P+
Sbjct: 275 PQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ-PSPVLQLQQKQSRISPIQ 332
Query: 367 QGHGQPPPSVV 377
+ G P ++
Sbjct: 333 KPQGLDPVEIL 343
Score = 32.0 bits (71), Expect = 3.2
Identities = 54/217 (24%), Positives = 74/217 (34%), Gaps = 28/217 (12%)
Query: 300 NDPLVVDEVALPSM--IPFPPPPPGLPPPPPP------GMLMP-------------PMPG 338
+D +V+++ SM PP PG+ PP P G + P PM G
Sbjct: 81 HDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSG 140
Query: 339 PGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPG 398
GP P P PG PG + P P V L R I ++ +R QP
Sbjct: 141 GGPTPPQMPPSQPG-ALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKML-ARGQPL 198
Query: 399 TSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVP 458
+ LA G R P L Q ++Q ++ ++ Q P P + P
Sbjct: 199 PETL-QLAVQGKRTLPGLQQQ---QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQP 254
Query: 459 PRNLMGSSIGYHTSVSSP-TPLVPDTYEPDGYNPEAP 494
G +S P TP P G AP
Sbjct: 255 ALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAP 291
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 62.4 bits (150), Expect = 2e-09
Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 326 PPPPGMLMPPMPGPGPGPGPGP--GPGPGPGPGPG--HSMRLPVPQGHGQPPPSVVLPIP 381
P PG + P P PGPGP PGP GP PGPGP PG HSM P P PPSV P+P
Sbjct: 4 PTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSP-----GPPSVSHPMP 58
Score = 53.9 bits (128), Expect = 8e-07
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 40/145 (27%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGP-----GPGPGP----GPGPGPG--- 358
P +P P P PG P P PG ++ P PGPGP PG GP PGP P P G
Sbjct: 7 PGAMPHPGPSPG--PGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTMGSTD 64
Query: 359 ------HSMRLPVP----------------QGHGQPPPSVVLPIPRPPITQSSLINSRDQ 396
H M P+ +G G PP + P+ P+ Q S
Sbjct: 65 FPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPH 124
Query: 397 PGTSAVPNLASV----GTRLPPPLP 417
P P S G PP +P
Sbjct: 125 PSPLGAPEHVSSPMSGGGPTPPQMP 149
Score = 40.0 bits (92), Expect = 0.012
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 319 PPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPP---- 374
P P L P P L P PG P P P P PG S+ P P GQP P
Sbjct: 265 PGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAP---GQPSPVLQL 321
Query: 375 ----SVVLPIPRPP-ITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNL 420
S + PI +P + ++ R+ + + + LP LP +L
Sbjct: 322 QQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDL 372
Score = 34.7 bits (78), Expect = 0.49
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPP---MPGPG-PGPGPGPGPGPGPGPGPGHSMRLPVP 366
P +P P P G P P PP PP +PGP P P PG P P S P+
Sbjct: 275 PQKLPVPAPG-GRPSPAPPAAAQPPAAAVPGPSVPQPAPGQ-PSPVLQLQQKQSRISPIQ 332
Query: 367 QGHGQPPPSVV 377
+ G P ++
Sbjct: 333 KPQGLDPVEIL 343
Score = 32.0 bits (71), Expect = 3.2
Identities = 54/217 (24%), Positives = 74/217 (34%), Gaps = 28/217 (12%)
Query: 300 NDPLVVDEVALPSM--IPFPPPPPGLPPPPPP------GMLMP-------------PMPG 338
+D +V+++ SM PP PG+ PP P G + P PM G
Sbjct: 81 HDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSG 140
Query: 339 PGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPG 398
GP P P PG PG + P P V L R I ++ +R QP
Sbjct: 141 GGPTPPQMPPSQPG-ALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKML-ARGQPL 198
Query: 399 TSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAARLVP 458
+ LA G R P L Q ++Q ++ ++ Q P P + P
Sbjct: 199 PETL-QLAVQGKRTLPGLQQQ---QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQP 254
Query: 459 PRNLMGSSIGYHTSVSSP-TPLVPDTYEPDGYNPEAP 494
G +S P TP P G AP
Sbjct: 255 ALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAP 291
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 62.4 bits (150), Expect = 2e-09
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 302 PLVVDEVALPSMIPFPPPPPGLPP----PPPPGMLMPP-------MPGPGPGPGPGPGPG 350
PL V +P P PPP +PP PP G L PP +P PG GPG P P
Sbjct: 661 PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP 720
Query: 351 PGPGPGPG-HSMRLP---VPQGHGQP--PPSVVLPIPRPPITQSSLINSRDQPGTSAVPN 404
P P PG + M LP +P G P PP + P PPI+ +L+ S + + +
Sbjct: 721 PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLV-SGARGNAESGDS 779
Query: 405 LASVGTRLPPPLPQNL 420
+ G+ +PP P NL
Sbjct: 780 VKMYGSAVPPAAPTNL 795
Score = 50.8 bits (120), Expect = 7e-06
Identities = 44/126 (34%), Positives = 48/126 (38%), Gaps = 35/126 (27%)
Query: 309 ALPSMIPF--PP--PPPGL-------------------PPPPPPGMLMPP---MPGPGPG 342
A P +IP PP PPP L PPP P G MPP M GP P
Sbjct: 830 ARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPP 889
Query: 343 PGPGPGPG-----PGPGPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQP 397
GP PG GPGPGPG P + Q PP P+P Q + QP
Sbjct: 890 HGPFVRPGGMPGLGGPGPGPGG----PEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQP 945
Query: 398 GTSAVP 403
S P
Sbjct: 946 PPSQQP 951
Score = 47.0 bits (110), Expect = 1e-04
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 69 FESLYTKNYLPLLEPVKPEPKPLVQEKEEIK-----EEVFQEPAEEERDGRKKKYPSPQK 123
F L T + P+ +PV P P P VQ+ + E + Q+P ++E + + ++
Sbjct: 368 FGLLPTPPFPPMAQPVIP-PTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKR 426
Query: 124 TRSESSERRTREKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRS 183
S++ + R+R R + RR RS SRS+ RSRSRS
Sbjct: 427 HMSDNRKSRSRSASRSPKR--------------------RRSRSGSRSRRSRHRRSRSRS 466
Query: 184 RGRSKDRDPNRNVEHRERSKFKSER 208
R R + +R+ E R+R K + R
Sbjct: 467 RDRRRHSPRSRSQERRDREKERERR 491
Score = 40.8 bits (94), Expect = 0.007
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 83 PVKPEPKPLVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKT--RSESSERRTREK--KR 138
P +P+ +P Q ++ +++ Q+P ++ ++ P + R + + R +E+ +R
Sbjct: 922 PQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRR 981
Query: 139 EDGKW--RDYDRYYERNE----LYREKYDWRRGRSKSRSKSRGLSRSRSRSRG-RSKDRD 191
G D +RY RN+ R++ +W R RS R + R L RS G R ++RD
Sbjct: 982 SFGNRVENDRERYGNRNDDRDNSNRDRREWGR-RSPDRDRHRDLEERNRRSSGHRDRERD 1040
Query: 192 PNRNVEHRE----RSKFKSERNDLESSYVPVSAP 221
RE R K K E D V P
Sbjct: 1041 SRDRESRREKEEARGKEKPEVTDRAGGNKTVEPP 1074
Score = 31.2 bits (69), Expect = 5.4
Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 12/132 (9%)
Query: 293 LCQFDHGNDPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPG 352
L +FD+ ++P V+E P PP P +P P P P
Sbjct: 262 LDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPA---AASPPPPQA 318
Query: 353 PGPGPGHSMRLPVPQGH---GQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVG 409
P PG M+ P H Q P ++ I Q + + P +P +
Sbjct: 319 PFGFPGDGMQQPAYTQHQNMDQFQPRMM------GIQQDPMHHQVPLPPNGQMPGFGLLP 372
Query: 410 TRLPPPLPQNLL 421
T PP+ Q ++
Sbjct: 373 TPPFPPMAQPVI 384
Score = 31.2 bits (69), Expect = 5.4
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 28/119 (23%)
Query: 109 EERDGRK------KKYPSPQKTRSESSERRTR-------------------EKKREDGKW 143
E+RDGR+ ++ P PQ + +++ + + +++
Sbjct: 913 EDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSG 972
Query: 144 RDYDRYYERNELYREKYDWRRGRSKSRSKSRGLSRSRSRSRG-RSKDRDPNRNVEHRER 201
RD +R+ R+ R + D R R +R+ R S R G RS DRD +R++E R R
Sbjct: 973 RDQERFGRRSFGNRVEND--RERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNR 1029
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 62.0 bits (149), Expect = 3e-09
Identities = 43/91 (47%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 310 LPSMIPFPPPPP------GLPPPPPP-----GMLMPPMPGPGPGPG-PGPGPGPG----P 353
LP PPPPP G+PPPPPP GM PP P PG GPG P P P PG P
Sbjct: 672 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPPPPPFPGGPGIP 730
Query: 354 GPGPGHSMRLPVPQGHGQPPPSVVLPIPRPP 384
P PG M P P G G P + VLP P
Sbjct: 731 PPPPGMGMPPPPPFGFG-VPAAPVLPFGLTP 760
Score = 61.2 bits (147), Expect = 5e-09
Identities = 38/78 (48%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 314 IPFPPPPPG---LPPPPPP---GMLMPPMPGPGPGP-GPGPGPGPGPGPGPGHSMRLPVP 366
IP PPP PG +PPPPPP +PP P P PG G P P P PG GPG P P
Sbjct: 666 IPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPPPPPFP 724
Query: 367 QGHGQPPPSVVLPIPRPP 384
G G PPP + +P PP
Sbjct: 725 GGPGIPPPPPGMGMPPPP 742
Score = 58.5 bits (140), Expect = 3e-08
Identities = 64/235 (27%), Positives = 86/235 (36%), Gaps = 34/235 (14%)
Query: 309 ALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPG--PGPGPGPGPGPGPGPG-----HSM 361
++PS P PP PP P G ++PP P PG P P P P P P P PG
Sbjct: 566 SVPSRAPVPPAPP---LPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPP 622
Query: 362 RLPVPQGHGQPPP---SVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQ 418
LP PPP +P P PP+ + I P S++P GT +PPP P
Sbjct: 623 SLPGGTAISPPPPLSGDATIP-PPPPLPEGVGI-----PSPSSLPG----GTAIPPPPPL 672
Query: 419 NLLYTVSERQPMYSREHG------AAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTS 472
+ P G E PPPL +PP G
Sbjct: 673 PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG---- 728
Query: 473 VSSPTP-LVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDM 526
+ P P + P G+ A + G + + + Q +RPN L + D+
Sbjct: 729 IPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDL 783
Score = 44.3 bits (103), Expect = 6e-04
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 55/181 (30%)
Query: 314 IPFPPPPPGLPPPPPPGMLMPPMPGPGPG---PGPGPGPGPGPGPGPGHSMRLPVPQGHG 370
I PP P P PP PP+PG P P PG P P P
Sbjct: 561 ITVPPSVPSRAPVPPA----PPLPGDSGTIIPPPPAPGDSTTPPPPP------------- 603
Query: 371 QPPPSVVLPIPRPPITQSSLINSRDQ-PGTSAV---PNLASVGT-RLPPPLPQNLLYTVS 425
PPP P PP+ I+S PG +A+ P L+ T PPPLP+ +
Sbjct: 604 PPPP------PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV----- 652
Query: 426 ERQPMYSREHGAAASERLQLGT---PPPLL--AARLVPPRNLMGSSIGYHTSVSSPTPLV 480
G + L GT PPP L +AR+ PP + S G + P P +
Sbjct: 653 ----------GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG----IPPPPPPL 698
Query: 481 P 481
P
Sbjct: 699 P 699
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 62.0 bits (149), Expect = 3e-09
Identities = 43/91 (47%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 310 LPSMIPFPPPPP------GLPPPPPP-----GMLMPPMPGPGPGPG-PGPGPGPG----P 353
LP PPPPP G+PPPPPP GM PP P PG GPG P P P PG P
Sbjct: 681 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPPPPPFPGGPGIP 739
Query: 354 GPGPGHSMRLPVPQGHGQPPPSVVLPIPRPP 384
P PG M P P G G P + VLP P
Sbjct: 740 PPPPGMGMPPPPPFGFG-VPAAPVLPFGLTP 769
Score = 61.2 bits (147), Expect = 5e-09
Identities = 38/78 (48%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 314 IPFPPPPPG---LPPPPPP---GMLMPPMPGPGPGP-GPGPGPGPGPGPGPGHSMRLPVP 366
IP PPP PG +PPPPPP +PP P P PG G P P P PG GPG P P
Sbjct: 675 IPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPPPPPFP 733
Query: 367 QGHGQPPPSVVLPIPRPP 384
G G PPP + +P PP
Sbjct: 734 GGPGIPPPPPGMGMPPPP 751
Score = 58.5 bits (140), Expect = 3e-08
Identities = 64/235 (27%), Positives = 86/235 (36%), Gaps = 34/235 (14%)
Query: 309 ALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPG--PGPGPGPGPGPGPGPG-----HSM 361
++PS P PP PP P G ++PP P PG P P P P P P P PG
Sbjct: 575 SVPSRAPVPPAPP---LPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPP 631
Query: 362 RLPVPQGHGQPPP---SVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQ 418
LP PPP +P P PP+ + I P S++P GT +PPP P
Sbjct: 632 SLPGGTAISPPPPLSGDATIP-PPPPLPEGVGI-----PSPSSLPG----GTAIPPPPPL 681
Query: 419 NLLYTVSERQPMYSREHG------AAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTS 472
+ P G E PPPL +PP G
Sbjct: 682 PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG---- 737
Query: 473 VSSPTP-LVPDTYEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDM 526
+ P P + P G+ A + G + + + Q +RPN L + D+
Sbjct: 738 IPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDL 792
Score = 44.3 bits (103), Expect = 6e-04
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 55/181 (30%)
Query: 314 IPFPPPPPGLPPPPPPGMLMPPMPGPGPG---PGPGPGPGPGPGPGPGHSMRLPVPQGHG 370
I PP P P PP PP+PG P P PG P P P
Sbjct: 570 ITVPPSVPSRAPVPPA----PPLPGDSGTIIPPPPAPGDSTTPPPPP------------- 612
Query: 371 QPPPSVVLPIPRPPITQSSLINSRDQ-PGTSAV---PNLASVGT-RLPPPLPQNLLYTVS 425
PPP P PP+ I+S PG +A+ P L+ T PPPLP+ +
Sbjct: 613 PPPP------PPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV----- 661
Query: 426 ERQPMYSREHGAAASERLQLGT---PPPLL--AARLVPPRNLMGSSIGYHTSVSSPTPLV 480
G + L GT PPP L +AR+ PP + S G + P P +
Sbjct: 662 ----------GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG----IPPPPPPL 707
Query: 481 P 481
P
Sbjct: 708 P 708
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 62.0 bits (149), Expect = 3e-09
Identities = 57/172 (33%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 317 PPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPV---PQGHGQPP 373
P PPP PPPPPP L PP+P P P P PGP LPV P PP
Sbjct: 172 PAPPPPTPPPPPP-PLPPPLPSSSPIKTPLVSP-----PGPLTKGNLPVVAPPVPCAPPP 225
Query: 374 PSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVG-TRLPPPLPQNLLYTVSERQPMYS 432
P P PP+ +S+++ + + P LA + +PPPLP LL P
Sbjct: 226 PPPPPPPTPPPLPPASVLSDK-----AVKPQLAPLHLPPIPPPLP--LLPPCG--YPGLK 276
Query: 433 REHGAAASERLQLGTPPPLLA--ARLVPPRNLMGSSI-GYHTSVSSPTPLVP 481
E + A + + PPP L A P +L + G ++S +P PL P
Sbjct: 277 AEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPP 328
Score = 48.9 bits (115), Expect = 3e-05
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 19/157 (12%)
Query: 299 GNDPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGP---GPGPGPGP--GP 353
GN P+V V P PPPPP PP PP +L P P P P P P P
Sbjct: 210 GNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPP 269
Query: 354 GPGPGHSMRLPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLP 413
PG P Q PP+ P PP+ + + R +P + S + P
Sbjct: 270 CGYPGLKAEPASPAQDAQEPPA-----PPPPLPPYASCSPRASLPAPPLPGVNS-SSETP 323
Query: 414 PPLPQNLLYTVSERQPMYSREHGAAASERLQLGTPPP 450
PPLP + P + A ++ L PP
Sbjct: 324 PPLP--------PKSPSFQAPPQKAGAQALPAPPAPP 352
Score = 43.1 bits (100), Expect = 0.001
Identities = 51/215 (23%), Positives = 72/215 (33%), Gaps = 54/215 (25%)
Query: 314 IPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPP 373
+P PPPPP PPPPP + PP PP
Sbjct: 1 MPVPPPPPPPLPPPPPPLGAPP-----------------------------------PPP 25
Query: 374 PSVVLPIPRPPI-TQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQPMYS 432
PS PP+ T +S + D G SA+ GTRL N +
Sbjct: 26 PSA------PPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSAPQIESSKGT 79
Query: 433 REHGAAASERLQLGTPPPL--------LAARLVPPRNLMGSSIGYHTSVSSPTPLVPD-T 483
+ G ++ TPP L R R++ G G +P+P +P+ T
Sbjct: 80 NKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKT 139
Query: 484 YEPDGYNPEAPSITSSGRSQYRQFFSRTQTQRPNL 518
P +P + G + +RT RPN+
Sbjct: 140 ISGPLIPPASPRL---GNTSEAHGAARTAPPRPNV 171
Score = 36.2 bits (82), Expect = 0.17
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 311 PSMIPFPPPPPGLPPPPPPGMLMPPM 336
P +P PPPP G PPPPPP PP+
Sbjct: 8 PPPLPPPPPPLGAPPPPPPS--APPV 31
Score = 34.7 bits (78), Expect = 0.49
Identities = 28/94 (29%), Positives = 35/94 (37%), Gaps = 6/94 (6%)
Query: 310 LPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGH 369
LP + PP LPP P P G P P PG P R G
Sbjct: 313 LPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGK 372
Query: 370 GQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVP 403
PPP+ P R P T+ ++S+ Q T+ P
Sbjct: 373 LNPPPA---PPARSPTTE---LSSKSQQATAWTP 400
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 61.2 bits (147), Expect = 5e-09
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 45/226 (19%)
Query: 28 LANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKNYLPLLEPVKPE 87
LA +V++L +K+ KA L K + F D L +L L L++ ++P
Sbjct: 49 LAEFVISLAEKNTTFDTFKAS--------LVKNGAEFTDSLISNL-----LRLIQTMRPP 95
Query: 88 PKPLVQ---------EKEEIKE--EVFQEPAE-------------------EERDGRKKK 117
KP EKE++KE V +P +E +
Sbjct: 96 AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPS 155
Query: 118 YPSPQKTRSESSERRTREKKREDGKWRDYDRYYERNELYREKYDWRRGRSKSRSKSRGLS 177
+K R RT++KKR + R+ DR +R E R++ RR RS+SRS+SR
Sbjct: 156 AAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDR-ERNRDRDHKRRHRSRSRSRSRTRE 214
Query: 178 RSRSRSRGRSKDRDPNRNVEHRERSKFKSERNDLESSYVPVSAPPP 223
R++ +SR RS+ R + + ++R K+ ERN V PPP
Sbjct: 215 RNKVKSRYRSRSRSQSPPKDRKDRDKY-GERNLDRWRDKHVDRPPP 259
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 61.2 bits (147), Expect = 5e-09
Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 24/157 (15%)
Query: 311 PSMIPFPPPPPGLPPPP------PPGMLMPPMPGPGPGPGPGPGPGPG---PGPGPGHSM 361
P+ + PPP PPPP PP PP P P P P PG P GP H
Sbjct: 36 PNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQ 95
Query: 362 R---LPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQ 418
R +P P PPP ++ P PP+T PGT A+P + P +
Sbjct: 96 RPPFMPPPMSSMPPPPGMMFPPGMPPVT---------APGTPALPPTEEIWVENKTPDGK 146
Query: 419 NLLYTVSERQPMYSREHGAAASERLQLGTPPPLLAAR 455
Y R+ +++ G ++ +L P+LAA+
Sbjct: 147 VYYYNARTRESAWTKPDGVKVIQQSEL---TPMLAAQ 180
Score = 50.8 bits (120), Expect = 7e-06
Identities = 37/115 (32%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 315 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPP 374
P PPP + PPP LM P P G GP P P P G P P+P G PPP
Sbjct: 32 PAPPPNAVMRGPPP---LMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPP 88
Query: 375 SVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLPQNLLYTVSERQP 429
+ RPP + + PG P + V P LP V + P
Sbjct: 89 MGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVENKTP 143
Score = 33.9 bits (76), Expect = 0.83
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 16/51 (31%)
Query: 310 LPSMIPF---PPP--------PPGLPP-----PPPPGMLMPPMPGPGPGPG 344
+P M P PPP PP +PP PPPPGM+ PP P PG
Sbjct: 76 MPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPG 126
Score = 33.9 bits (76), Expect = 0.83
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 310 LPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPG-PGPGPGPGPGPGP 355
LP +P P P P P +++PP P PG P P PG PG P
Sbjct: 340 LPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAP 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,755,922
Number of Sequences: 37866
Number of extensions: 3719263
Number of successful extensions: 74895
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 1659
Number of HSP's that attempted gapping in prelim test: 26040
Number of HSP's gapped (non-prelim): 23945
length of query: 1060
length of database: 18,247,518
effective HSP length: 113
effective length of query: 947
effective length of database: 13,968,660
effective search space: 13228321020
effective search space used: 13228321020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.