Search of human proteins with 110578660

Search of human proteins with 110578660

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]        294   1e-80
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]        254   2e-68
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]        254   2e-68
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]        253   3e-68
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]        252   8e-68
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]        252   8e-68
gi|157743286 transmembrane protein 90A [Homo sapiens]                  59   2e-09
gi|13376347 hypothetical protein LOC79953 [Homo sapiens]               58   2e-09
gi|77681565 NG5 protein [Homo sapiens]                                 39   0.001
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]       33   0.075
gi|100913209 heat shock transcription factor 4 isoform b [Homo s...    31   0.37 
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain...    30   0.83 
gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.1  
gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.1  
gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]           29   1.1  
gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]                     29   1.1  
gi|4885433 mitogen-activated protein kinase 8 interacting protei...    29   1.4  
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    29   1.4  
gi|22027651 adaptor-related protein complex 1 beta 1 subunit iso...    28   1.8  
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]    28   2.4  
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]    28   2.4  
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi...    28   3.1  
gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]      28   3.1  
gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens]      28   3.1  
gi|118918413 MICAL C-terminal like [Homo sapiens]                      28   3.1  
gi|155969701 espin-like [Homo sapiens]                                 28   3.1  
gi|221316616 extracellular matrix protein 1 isoform 2 precursor ...    27   4.1  
gi|238908524 hypothetical protein LOC389333 [Homo sapiens]             27   4.1  
gi|221316614 extracellular matrix protein 1 isoform 1 precursor ...    27   4.1  
gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens]           27   4.1  

>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
          Length = 139

 Score =  294 bits (753), Expect = 1e-80
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 HPQCLTYSRCYVSAFGIHA 139
           HPQCLTYSRCYVSAFGIHA
Sbjct: 121 HPQCLTYSRCYVSAFGIHA 139


>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score =  254 bits (648), Expect = 2e-68
 Identities = 123/131 (93%), Positives = 123/131 (93%), Gaps = 1/131 (0%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 -HPQCLTYSRC 130
             P C     C
Sbjct: 121 TRPSCPYSPHC 131


>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
          Length = 133

 Score =  254 bits (648), Expect = 2e-68
 Identities = 123/131 (93%), Positives = 123/131 (93%), Gaps = 1/131 (0%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 -HPQCLTYSRC 130
             P C     C
Sbjct: 121 TRPSCPYSPHC 131


>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
          Length = 127

 Score =  253 bits (647), Expect = 3e-68
 Identities = 121/122 (99%), Positives = 121/122 (99%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120

Query: 121 HP 122
            P
Sbjct: 121 LP 122


>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
          Length = 172

 Score =  252 bits (643), Expect = 8e-68
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120


>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
          Length = 123

 Score =  252 bits (643), Expect = 8e-68
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
           MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1   MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60

Query: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61  LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120


>gi|157743286 transmembrane protein 90A [Homo sapiens]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-09
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 54  LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
           + +VS G+ E      +D    +SD+          FL   P DHLGL +FSMLCCFWP+
Sbjct: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176

Query: 111 GIAAFCLAQ 119
           GIAAF  +Q
Sbjct: 177 GIAAFYFSQ 185


>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
          Length = 258

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 26/46 (56%), Positives = 31/46 (67%)

Query: 75  SDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
           SD  SD +         P DHLGL+VFSMLCCFWP+GIAAF L+ +
Sbjct: 161 SDYSSDTESEDNFLMMPPRDHLGLSVFSMLCCFWPLGIAAFYLSHE 206


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 13/23 (56%), Positives = 18/23 (78%)

Query: 92  PHDHLGLAVFSMLCCFWPVGIAA 114
           PHD++ +AV + +CCFWP GI A
Sbjct: 220 PHDYMPIAVLTTICCFWPTGIIA 242


>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
          Length = 340

 Score = 33.1 bits (74), Expect = 0.075
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 62  GEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLA 118
           G PR       SS  +    +GG       P D++ LA+ S  C  WPV I AF  A
Sbjct: 237 GSPRGSLSRHPSSQLAGPGVEGGEGTQK--PRDYIILAILSCFCPMWPVNIVAFAYA 291


>gi|100913209 heat shock transcription factor 4 isoform b [Homo
           sapiens]
          Length = 492

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 7   RELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG--EP 64
           R+L   L EG+ C TPA+       G+ L++  F +S         PLP  + GL     
Sbjct: 207 RKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQS---------PLPETNLGLSPHRA 257

Query: 65  RPPDVEDMSSSDSDSDWDGGSRLSP 89
           R P + D+     DS    G+RLSP
Sbjct: 258 RGPIISDI---PEDSPSPEGTRLSP 279


>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
            proline-rich containing [Homo sapiens]
          Length = 1435

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 18   ECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-EPRPPDVEDMSSSD 76
            + + PA++P R +    L+        R  +  +PP PS+ +GLG EP PP   + SS +
Sbjct: 1367 QLQAPAERPLRLQRSPVLK--------RRPKLEAPPSPSLGSGLGTEPLPPQPTEPSSPE 1418


>gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]
          Length = 104

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 24  QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
           QKP  H    P   + F         L      +S GLG    P      +SD    W  
Sbjct: 38  QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90

Query: 84  GSRLSPFLPHDHLG 97
                P+ P  HLG
Sbjct: 91  ACPSFPWCPQTHLG 104


>gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]
          Length = 398

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 20  ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDS 79
           + P   P    L S L+++A       L FL   + S++ G   P P D  +M S     
Sbjct: 224 QPPQDSPAGPNLDSTLQQLA-------LHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPP 276

Query: 80  DWDGGSRLSPFLP 92
               G+R SP  P
Sbjct: 277 APQVGARSSPKQP 289


>gi|4885433 mitogen-activated protein kinase 8 interacting protein 1
           [Homo sapiens]
          Length = 711

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 52  PPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVG 111
           PP       LGEP PP    +SS  S   +D  S     +  +H  L + S+  CF    
Sbjct: 347 PPGGGWRGSLGEPPPPPRASLSSDTSALSYD--SVKYTLVVDEHAQLELVSLRPCFGDYS 404

Query: 112 IAAFCLAQKHPQCLTYSRCYVSAFG 136
             +   A  +  C + S  Y SA G
Sbjct: 405 DESDS-ATVYDNCASVSSPYESAIG 428


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 22   PAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-----EPRPPDVEDMSSSD 76
            P   P R    SP    A  E+   L  L PP PSV    G     EP PP +E  +S +
Sbjct: 1519 PPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFE 1578

Query: 77   SDSDWDGGSRLSPFLPH 93
                    S L+P  PH
Sbjct: 1579 KPE-----SPLTPGPPH 1590


>gi|22027651 adaptor-related protein complex 1 beta 1 subunit
           isoform a [Homo sapiens]
          Length = 949

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 42  ESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
           E + G  F++PP  +V A LG P    + D+    S      GS ++P
Sbjct: 672 EGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAP 719


>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
          Length = 548

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 17  TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
           TE ETP   P   E   PL   ++ +        +PP    S GLG+  PP  ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476


>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
          Length = 540

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 17  TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
           TE ETP   P   E   PL   ++ +        +PP    S GLG+  PP  ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476


>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
           sapiens]
          Length = 578

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 48  QFLSP-PLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGG 84
           QFL P P P     LG   PP + D  SS S +  D G
Sbjct: 334 QFLLPDPHPQADRTLGNREPPVLGDSCSSGSSNSTDSG 371


>gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]
          Length = 885

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 2   DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
           D PS  EL++ L    +   PAQ+P          EI +     G  +  P  P  + G 
Sbjct: 783 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 831

Query: 62  GEPRPPDVEDMSS 74
             P  PD +D  S
Sbjct: 832 DPPTQPDPKDSCS 844


>gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens]
          Length = 894

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 2   DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
           D PS  EL++ L    +   PAQ+P          EI +     G  +  P  P  + G 
Sbjct: 792 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 840

Query: 62  GEPRPPDVEDMSS 74
             P  PD +D  S
Sbjct: 841 DPPTQPDPKDSCS 853


>gi|118918413 MICAL C-terminal like [Homo sapiens]
          Length = 695

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 20  ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPP 67
           E+  +K  R   GSP R++   +S + L+ L  P  S S     P PP
Sbjct: 413 ESRQRKDIRDLFGSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPP 460


>gi|155969701 espin-like [Homo sapiens]
          Length = 1005

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 52  PPLPSVSAGL--GEPRPPDVEDMSSS 75
           P LP   +GL  GEPRP D E+ S S
Sbjct: 689 PALPKPRSGLASGEPRPGDTEEASDS 714


>gi|221316616 extracellular matrix protein 1 isoform 2 precursor
           [Homo sapiens]
          Length = 415

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 22  PAQKPGRHELGSPLRE--IAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSD--- 76
           PAQ P   E+G PL +  +   + L  LQ  +       A  G+   P+ E  +++    
Sbjct: 93  PAQLPAEKEVGPPLPQEAVPLQKELPSLQHPNEQKEGTPAPFGDQSHPEPESWNAAQHCQ 152

Query: 77  ---SDSDWDGGSRLSPFLP 92
              S   W  G RL  F P
Sbjct: 153 QDRSQGGW--GHRLDGFPP 169


>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
          Length = 1015

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 34  PLREIAFA-ESLRGL--QFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
           P   IAF  E+  GL  + L+PP PS     G P P +++  S+ +      GGS+ SP
Sbjct: 527 PGSSIAFTQEAQNGLTQEELAPPTPSAP---GTPEPTEMQSPSTREISDLAFGGSQQSP 582


>gi|221316614 extracellular matrix protein 1 isoform 1 precursor
           [Homo sapiens]
          Length = 540

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 22  PAQKPGRHELGSPLRE--IAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSD--- 76
           PAQ P   E+G PL +  +   + L  LQ  +       A  G+   P+ E  +++    
Sbjct: 93  PAQLPAEKEVGPPLPQEAVPLQKELPSLQHPNEQKEGTPAPFGDQSHPEPESWNAAQHCQ 152

Query: 77  ---SDSDWDGGSRLSPFLP 92
              S   W  G RL  F P
Sbjct: 153 QDRSQGGW--GHRLDGFPP 169


>gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens]
          Length = 293

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 20/86 (23%)

Query: 61  LGEPRPPDVEDMSSSDSDSDWDG----GSRLSPFLP------------HDHLGLAVFSML 104
           L   R  +VE+  +SD+   + G    GS  SP LP            +  LGL + ++L
Sbjct: 118 LRRQRSGEVEN--NSDNSGRYQGLEHRGSEASPALPGLKLSADQVALVYSTLGLCLCAVL 175

Query: 105 CCFWPVGIAAFCLAQKHP-QCLTYSR 129
           CCF  V +A F   +  P  C   SR
Sbjct: 176 CCFL-VAVACFLKKRGDPCSCQPRSR 200


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,780,180
Number of Sequences: 37866
Number of extensions: 345806
Number of successful extensions: 1381
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1337
Number of HSP's gapped (non-prelim): 98
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.